Cow genome map
| Conread name: | Tra1-TCH01E080082 |
| Conread position: | 226-849 |
| Cow position: | chr21:26400766-26400131 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 23 |
| Conread position: | 226-851 |
| Cow position: | chr21:10853264-10853905 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-852 |
| Cow position: | chr21:4813340-4812703 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 26 |
| Conread position: | 226-852 |
| Cow position: | chr21:22854921-22855539 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:149148-149791 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:4733531-4732896 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:5020144-5020786 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 32 |
| Conread position: | 226-855 |
| Cow position: | chr21:10570285-10570931 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:17143678-17144332 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:27066601-27065955 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:27608702-27608058 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:28915972-28915332 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 21 |
| Conread position: | 226-855 |
| Cow position: | chr21:30596089-30595446 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 8 |
| Conread position: | 226-855 |
| Cow position: | chr21:31513270-31512627 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:33256554-33257200 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:33317368-33316722 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-855 |
| Cow position: | chr21:47648338-47648986 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 23 |
| Conread position: | 229-852 |
| Cow position: | chr21:27343400-27342762 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 230-852 |
| Cow position: | chr21:2419201-2419835 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 116 |
| Conread position: | 232-852 |
| Cow position: | chr21:44707-45343 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 17 |
| Conread position: | 234-842 |
| Cow position: | chr21:4898956-4898333 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 193 |
| Conread position: | 234-847 |
| Cow position: | chr21:35576596-35575981 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 234-852 |
| Cow position: | chr21:2768832-2768202 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 21 |
| Conread position: | 234-855 |
| Cow position: | chr21:5010465-5009825 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 15 |
| Conread position: | 234-855 |
| Cow position: | chr21:28258679-28259305 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 22 |
| Conread position: | 236-843 |
| Cow position: | chr21:1766512-1765897 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 236-852 |
| Cow position: | chr21:13162444-13163051 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 237-852 |
| Cow position: | chr21:6966465-6965831 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-852 |
| Cow position: | chr21:30966936-30966302 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 528 |
| Conread position: | 237-855 |
| Cow position: | chr21:5642829-5642193 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 237-855 |
| Cow position: | chr21:19351853-19351217 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 237-855 |
| Cow position: | chr21:26757722-26757079 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-855 |
| Cow position: | chr21:27148544-27147908 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 339 |
| Conread position: | 237-855 |
| Cow position: | chr21:30564761-30565389 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 410 |
| Conread position: | 237-855 |
| Cow position: | chr21:36375997-36376625 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 538 |
| Conread position: | 237-855 |
| Cow position: | chr21:39470758-39470120 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-855 |
| Cow position: | chr21:41796713-41796081 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 131 |
| Conread position: | 237-855 |
| Cow position: | chr21:42916801-42917437 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 245 |
| Conread position: | 237-855 |
| Cow position: | chr21:48274190-48273553 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 105 |
| Conread position: | 237-856 |
| Cow position: | chr21:3781784-3782417 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 242-844 |
| Cow position: | chr21:9895380-9895990 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 5 |
| Conread position: | 247-844 |
| Cow position: | chr21:18284824-18285438 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 193 |
| Conread position: | 247-852 |
| Cow position: | chr21:27125700-27125077 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 204 |
| Conread position: | 252-852 |
| Cow position: | chr21:44862543-44861956 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 93 |
| Conread position: | 252-855 |
| Cow position: | chr21:2878812-2878195 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 273 |
| Conread position: | 253-852 |
| Cow position: | chr21:25814369-25813774 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 201 |
| Conread position: | 253-855 |
| Cow position: | chr21:48530193-48530815 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 109 |
| Conread position: | 258-849 |
| Cow position: | chr21:23501629-23501038 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 119 |
| Conread position: | 269-813 |
| Cow position: | chr21:33420936-33420374 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 167 |
| Conread position: | 269-852 |
| Cow position: | chr21:4560028-4559433 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 200 |
| Conread position: | 277-855 |
| Cow position: | chr21:34823224-34823820 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 0 |
| Conread position: | 288-855 |
| Cow position: | chr21:33710442-33709856 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 296-852 |
| Cow position: | chr21:37923261-37923817 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 23 |
| Conread position: | 301-855 |
| Cow position: | chr21:36535136-36534564 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 0 |
| Conread position: | 302-855 |
| Cow position: | chr21:27287055-27287617 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 199 |
| Conread position: | 307-851 |
| Cow position: | chr21:14533690-14534253 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 308-852 |
| Cow position: | chr21:33984195-33983634 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 129 |
| Conread position: | 327-852 |
| Cow position: | chr21:25156387-25156925 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 155 |
| Conread position: | 328-849 |
| Cow position: | chr21:4721758-4722275 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 173 |
| Conread position: | 331-855 |
| Cow position: | chr21:21217339-21216831 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 335-855 |
| Cow position: | chr21:40268304-40267788 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 262 |
| Conread position: | 342-852 |
| Cow position: | chr21:22719982-22719460 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 127 |
| Conread position: | 342-855 |
| Cow position: | chr21:4036142-4035639 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 350-852 |
| Cow position: | chr21:48235176-48234679 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 72 |
| Conread position: | 360-855 |
| Cow position: | chr21:30297609-30298123 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 362-852 |
| Cow position: | chr21:5595951-5596431 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 30 |
| Conread position: | 381-852 |
| Cow position: | chr21:31974298-31974775 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 163, 56 |
| Conread position: | 386-766 |
| Cow position: | chr21:25472356-25472751 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 69, 64 |
| Conread position: | 386-855 |
| Cow position: | chr21:32237496-32237983 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 402-852 |
| Cow position: | chr21:31275520-31275983 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 143 |
| Conread position: | 412-855 |
| Cow position: | chr21:49656000-49655539 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 415-855 |
| Cow position: | chr21:43404251-43403794 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 272 |
| Conread position: | 419-852 |
| Cow position: | chr21:20263456-20263035 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 421-835 |
| Cow position: | chr21:18847144-18846712 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 423-855 |
| Cow position: | chr21:47977461-47977911 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 432-852 |
| Cow position: | chr21:2905586-2905152 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 301 |
| Conread position: | 433-842 |
| Cow position: | chr21:42460848-42460433 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 36 |
| Conread position: | 441-856 |
| Cow position: | chr21:38450772-38450350 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 259 |
| Conread position: | 444-855 |
| Cow position: | chr21:25597888-25598308 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 373 |
| Conread position: | 453-852 |
| Cow position: | chr21:45782499-45782091 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 15 |
| Conread position: | 455-855 |
| Cow position: | chr21:38866386-38865968 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 460-852 |
| Cow position: | chr21:28597823-28598231 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 201 |
| Conread position: | 464-855 |
| Cow position: | chr21:26874828-26875235 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 467-852 |
| Cow position: | chr21:3766530-3766129 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 60 |
| Conread position: | 485-855 |
| Cow position: | chr21:23340907-23341295 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 492-855 |
| Cow position: | chr21:25986680-25987058 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 493-828 |
| Cow position: | chr21:27375369-27375723 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 493-855 |
| Cow position: | chr21:13735895-13735518 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 500-851 |
| Cow position: | chr21:34657268-34657630 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 504-851 |
| Cow position: | chr21:20244325-20243960 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 511-852 |
| Cow position: | chr21:39400523-39400876 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 239 |
| Conread position: | 515-852 |
| Cow position: | chr21:13749445-13749800 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 516-840 |
| Cow position: | chr21:17418346-17418008 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 518-834 |
| Cow position: | chr21:29423364-29423684 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 518-855 |
| Cow position: | chr21:33832690-33832332 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 134 |
| Conread position: | 527-852 |
| Cow position: | chr21:81045-81379 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 528-843 |
| Cow position: | chr21:28880971-28881300 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 535-829 |
| Cow position: | chr21:27522514-27522211 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 48, 149 |
| Conread position: | 545-852 |
| Cow position: | chr21:39060003-39059689 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 44, 157 |
| Conread position: | 557-855 |
| Cow position: | chr21:4719492-4719176 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 260 |
| Conread position: | 575-844 |
| Cow position: | chr21:2293823-2293549 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 229 |
| Conread position: | 575-852 |
| Cow position: | chr21:48195814-48196083 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 116, 12 |
| Conread position: | 582-849 |
| Cow position: | chr21:29499904-29500176 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 582-852 |
| Cow position: | chr21:6765659-6765382 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 129 |
| Conread position: | 582-852 |
| Cow position: | chr21:16277768-16278042 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 217 |
| Conread position: | 582-852 |
| Cow position: | chr21:46831200-46830924 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 222 |
| Conread position: | 582-855 |
| Cow position: | chr21:23329977-23329699 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 582-855 |
| Cow position: | chr21:34684415-34684674 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 582-855 |
| Cow position: | chr21:47168326-47168604 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 583-837 |
| Cow position: | chr21:32573347-32573607 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 91, 75 |
| Conread position: | 592-852 |
| Cow position: | chr21:18819260-18818992 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 111, 141 |
| Conread position: | 593-850 |
| Cow position: | chr21:15585330-15585086 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 595-844 |
| Cow position: | chr21:30627700-30627450 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 100, 156 |
| Conread position: | 596-855 |
| Cow position: | chr21:9208693-9208953 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 596-856 |
| Cow position: | chr21:18787129-18786868 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 95, 159 |
| Conread position: | 599-838 |
| Cow position: | chr21:28616649-28616882 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 19 |
| Conread position: | 606-842 |
| Cow position: | chr21:1057852-1058093 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 85, 192 |
| Conread position: | 606-855 |
| Cow position: | chr21:36892842-36892588 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 610-852 |
| Cow position: | chr21:4791509-4791751 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 188 |
| Conread position: | 614-849 |
| Cow position: | chr21:24297665-24297436 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 618-852 |
| Cow position: | chr21:16768711-16768482 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 139, 39 |
| Conread position: | 628-844 |
| Cow position: | chr21:13090369-13090157 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 630-855 |
| Cow position: | chr21:26628182-26628412 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 633-852 |
| Cow position: | chr21:2928457-2928232 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 66, 172 |
| Conread position: | 633-855 |
| Cow position: | chr21:42558191-42558418 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 634-855 |
| Cow position: | chr21:4541760-4541543 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 637-852 |
| Cow position: | chr21:42842861-42842648 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 122, 54 |
| Conread position: | 651-852 |
| Cow position: | chr21:42364375-42364576 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 651-855 |
| Cow position: | chr21:39508534-39508333 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 654-855 |
| Cow position: | chr21:33901265-33901060 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 660-855 |
| Cow position: | chr21:44762236-44762040 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 665-852 |
| Cow position: | chr21:28210318-28210505 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 666-852 |
| Cow position: | chr21:17207628-17207819 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 669-844 |
| Cow position: | chr21:26830110-26829930 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 672-851 |
| Cow position: | chr21:8126817-8126640 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 672-852 |
| Cow position: | chr21:28028090-28028269 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 128 |
| Conread position: | 684-855 |
| Cow position: | chr21:13111650-13111478 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 684-855 |
| Cow position: | chr21:30850335-30850506 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 695-852 |
| Cow position: | chr21:29213346-29213499 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 695-855 |
| Cow position: | chr21:7597788-7597627 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 712-852 |
| Cow position: | chr21:28441943-28442083 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 86 |
| Conread position: | 720-852 |
| Cow position: | chr21:8890389-8890522 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.