Cow genome map

Conread name: Tra1-TCH01E080082

Conread position: 212-855
Cow position:
Alignm length: 662
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 376, 37

Conread position: 226-834
Cow position:
Alignm length: 629
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 15

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 230-855
Cow position:
Alignm length: 648
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 299

Conread position: 234-851
Cow position:
Alignm length: 631
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 15

Conread position: 234-855
Cow position:
Alignm length: 642
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 15

Conread position: 234-855
Cow position:
Alignm length: 640
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 100

Conread position: 234-855
Cow position:
Alignm length: 637
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 216

Conread position: 234-855
Cow position:
Alignm length: 640
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 231

Conread position: 237-852
Cow position:
Alignm length: 632
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 69

Conread position: 237-855
Cow position:
Alignm length: 636
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 171

Conread position: 237-855
Cow position:
Alignm length: 637
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 300

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 242-848
Cow position:
Alignm length: 623
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 5

Conread position: 242-855
Cow position:
Alignm length: 633
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 347, 303

Conread position: 251-855
Cow position:
Alignm length: 622
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 0

Conread position: 252-852
Cow position:
Alignm length: 619
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 82

Conread position: 253-842
Cow position:
Alignm length: 624
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 77

Conread position: 255-852
Cow position:
Alignm length: 616
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 9

Conread position: 269-855
Cow position:
Alignm length: 605
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 0

Conread position: 271-840
Cow position:
Alignm length: 594
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 18

Conread position: 271-852
Cow position:
Alignm length: 598
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 13

Conread position: 298-855
Cow position:
Alignm length: 565
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 187

Conread position: 322-840
Cow position:
Alignm length: 539
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 53

Conread position: 322-852
Cow position:
Alignm length: 541
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 328-852
Cow position:
Alignm length: 545
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 25

Conread position: 332-851
Cow position:
Alignm length: 545
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 7

Conread position: 334-797
Cow position:
Alignm length: 483
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 69

Conread position: 345-855
Cow position:
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 29

Conread position: 359-842
Cow position:
Alignm length: 497
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 142

Conread position: 359-855
Cow position:
Alignm length: 515
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 473

Conread position: 361-855
Cow position:
Alignm length: 513
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 0

Conread position: 361-855
Cow position:
Alignm length: 512
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 414

Conread position: 392-855
Cow position:
Alignm length: 482
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 99

Conread position: 410-852
Cow position:
Alignm length: 462
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 236

Conread position: 433-852
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 113

Conread position: 441-850
Cow position:
Alignm length: 421
Alignm identity: 282
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 36, 95

Conread position: 442-834
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 453-855
Cow position:
Alignm length: 421
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 27

Conread position: 459-851
Cow position:
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 57

Conread position: 472-855
Cow position:
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 476-852
Cow position:
Alignm length: 400
Alignm identity: 273
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 345

Conread position: 482-842
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 340

Conread position: 483-852
Cow position:
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 187

Conread position: 488-855
Cow position:
Alignm length: 386
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 494-855
Cow position:
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 497-855
Cow position:
Alignm length: 378
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 498-855
Cow position:
Alignm length: 376
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 504-855
Cow position:
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 359

Conread position: 505-850
Cow position:
Alignm length: 358
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 12

Conread position: 508-852
Cow position:
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 179

Conread position: 510-855
Cow position:
Alignm length: 364
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 514-844
Cow position:
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 38

Conread position: 544-855
Cow position:
Alignm length: 331
Alignm identity: 233
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 546-852
Cow position:
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 268

Conread position: 547-841
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 238

Conread position: 575-852
Cow position:
Alignm length: 283
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 153

Conread position: 580-852
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 119, 9

Conread position: 582-843
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 36

Conread position: 582-852
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 121, 0

Conread position: 582-852
Cow position:
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 117, 0

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 116, 57

Conread position: 587-855
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 594-852
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 105, 24

Conread position: 600-852
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 605-855
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 86, 123

Conread position: 606-855
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 85, 27

Conread position: 608-855
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 91, 0

Conread position: 619-855
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 0

Conread position: 629-855
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 635-855
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 648-855
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 652-855
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 655-850
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 98, 26

Conread position: 691-855
Cow position:
Alignm length: 166
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 693-843
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 106

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 697-855
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 706-855
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 85

Conread position: 708-852
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 26

Conread position: 710-852
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 37

Conread position: 710-852
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.