Cow genome map

Conread name: Tra1-TCH01E080082

Conread position: 218-855
Cow position:
Alignm length: 656
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 31

Conread position: 225-833
Cow position:
Alignm length: 642
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 24

Conread position: 226-843
Cow position:
Alignm length: 637
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 23

Conread position: 226-851
Cow position:
Alignm length: 647
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 22

Conread position: 226-851
Cow position:
Alignm length: 646
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 23

Conread position: 226-852
Cow position:
Alignm length: 644
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-852
Cow position:
Alignm length: 633
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 22

Conread position: 226-852
Cow position:
Alignm length: 647
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 23

Conread position: 226-855
Cow position:
Alignm length: 650
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 20

Conread position: 226-855
Cow position:
Alignm length: 636
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 26

Conread position: 226-855
Cow position:
Alignm length: 638
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 23

Conread position: 226-855
Cow position:
Alignm length: 636
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 425, 23

Conread position: 226-855
Cow position:
Alignm length: 666
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 646
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 21

Conread position: 228-855
Cow position:
Alignm length: 664
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 21

Conread position: 228-855
Cow position:
Alignm length: 647
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 19

Conread position: 229-852
Cow position:
Alignm length: 646
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 232-855
Cow position:
Alignm length: 642
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 0

Conread position: 232-855
Cow position:
Alignm length: 642
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 65

Conread position: 234-841
Cow position:
Alignm length: 627
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 15

Conread position: 234-852
Cow position:
Alignm length: 650
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 13

Conread position: 234-852
Cow position:
Alignm length: 635
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 15

Conread position: 234-852
Cow position:
Alignm length: 637
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 21

Conread position: 234-855
Cow position:
Alignm length: 640
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 77

Conread position: 234-855
Cow position:
Alignm length: 640
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 100

Conread position: 237-844
Cow position:
Alignm length: 650
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 86

Conread position: 237-850
Cow position:
Alignm length: 633
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 237-852
Cow position:
Alignm length: 637
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 181

Conread position: 237-852
Cow position:
Alignm length: 642
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 134

Conread position: 237-852
Cow position:
Alignm length: 643
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 593

Conread position: 237-855
Cow position:
Alignm length: 637
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 518

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 75

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 94

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 105

Conread position: 237-855
Cow position:
Alignm length: 635
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 105

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 123

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 131

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 247-851
Cow position:
Alignm length: 618
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 124

Conread position: 249-852
Cow position:
Alignm length: 620
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 242

Conread position: 250-852
Cow position:
Alignm length: 623
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 71

Conread position: 254-841
Cow position:
Alignm length: 606
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 0

Conread position: 259-852
Cow position:
Alignm length: 619
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 95

Conread position: 269-855
Cow position:
Alignm length: 605
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 210

Conread position: 269-855
Cow position:
Alignm length: 591
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 72

Conread position: 274-852
Cow position:
Alignm length: 594
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 71

Conread position: 302-850
Cow position:
Alignm length: 577
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 120

Conread position: 305-836
Cow position:
Alignm length: 555
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 54

Conread position: 308-852
Cow position:
Alignm length: 578
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 310-855
Cow position:
Alignm length: 564
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 0

Conread position: 313-844
Cow position:
Alignm length: 552
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 62

Conread position: 325-852
Cow position:
Alignm length: 546
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 331

Conread position: 334-852
Cow position:
Alignm length: 535
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 36

Conread position: 334-856
Cow position:
Alignm length: 536
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 530

Conread position: 346-855
Cow position:
Alignm length: 528
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 13

Conread position: 347-796
Cow position:
Alignm length: 468
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 74

Conread position: 349-852
Cow position:
Alignm length: 522
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 60

Conread position: 356-852
Cow position:
Alignm length: 518
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 19

Conread position: 359-855
Cow position:
Alignm length: 515
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 363-852
Cow position:
Alignm length: 507
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 23

Conread position: 392-844
Cow position:
Alignm length: 479
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 80

Conread position: 397-852
Cow position:
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 12

Conread position: 409-852
Cow position:
Alignm length: 464
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 33

Conread position: 416-850
Cow position:
Alignm length: 455
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 58

Conread position: 432-850
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 21

Conread position: 433-852
Cow position:
Alignm length: 445
Alignm identity: 267
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 145, 370

Conread position: 452-843
Cow position:
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 201

Conread position: 454-855
Cow position:
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 205

Conread position: 474-852
Cow position:
Alignm length: 398
Alignm identity: 269
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 32, 11

Conread position: 479-844
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 154

Conread position: 479-855
Cow position:
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 480-855
Cow position:
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 480-855
Cow position:
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 165

Conread position: 494-852
Cow position:
Alignm length: 378
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 501-855
Cow position:
Alignm length: 373
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 136

Conread position: 511-855
Cow position:
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 197

Conread position: 521-849
Cow position:
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 522-842
Cow position:
Alignm length: 340
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 525-844
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 135

Conread position: 526-843
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 213

Conread position: 544-855
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 547-855
Cow position:
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 550-852
Cow position:
Alignm length: 309
Alignm identity: 202
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 144, 37

Conread position: 551-841
Cow position:
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 562-852
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 13

Conread position: 573-855
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 11

Conread position: 575-849
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 12

Conread position: 575-850
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 123, 43

Conread position: 582-855
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 152

Conread position: 590-852
Cow position:
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 594-834
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 104, 168

Conread position: 595-840
Cow position:
Alignm length: 258
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 60

Conread position: 599-852
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 160, 92

Conread position: 623-855
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 68, 117

Conread position: 628-855
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 628-855
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 0

Conread position: 629-852
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 100

Conread position: 630-855
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 633-851
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 635-855
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 38

Conread position: 641-855
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 647-855
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 655-852
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 108, 50

Conread position: 663-855
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 669-852
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 83

Conread position: 682-852
Cow position:
Alignm length: 172
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 71, 9

Conread position: 684-847
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 119, 114

Conread position: 684-855
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 685-850
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 8

Conread position: 690-851
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 110

Conread position: 695-852
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 106

Conread position: 697-852
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 104

Conread position: 699-849
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 21

Conread position: 700-852
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 50

Conread position: 703-852
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 706-852
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 708-852
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 97

Conread position: 711-852
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 39

Show alignments to all cow chromosomes.