Cow genome map

Conread name: Tra1-TCH01E080082

Conread position: 70-855
Cow position:
Alignm length: 804
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 519, 297

Conread position: 138-852
Cow position:
Alignm length: 739
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 20

Conread position: 147-852
Cow position:
Alignm length: 711
Alignm identity: 197
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 536, 445

Conread position: 207-855
Cow position:
Alignm length: 678
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 42

Conread position: 218-852
Cow position:
Alignm length: 656
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 7

Conread position: 226-852
Cow position:
Alignm length: 639
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 644
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 22

Conread position: 226-855
Cow position:
Alignm length: 650
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 645
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 23

Conread position: 226-855
Cow position:
Alignm length: 637
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 650
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 226-855
Cow position:
Alignm length: 649
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 23

Conread position: 226-855
Cow position:
Alignm length: 660
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 23

Conread position: 226-855
Cow position:
Alignm length: 651
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 23

Conread position: 226-855
Cow position:
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 20

Conread position: 226-855
Cow position:
Alignm length: 652
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 15

Conread position: 226-855
Cow position:
Alignm length: 640
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 23

Conread position: 226-855
Cow position:
Alignm length: 647
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 227-855
Cow position:
Alignm length: 650
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 22

Conread position: 230-831
Cow position:
Alignm length: 626
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 101

Conread position: 230-852
Cow position:
Alignm length: 636
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 428

Conread position: 230-855
Cow position:
Alignm length: 645
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 230-857
Cow position:
Alignm length: 650
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 19

Conread position: 234-849
Cow position:
Alignm length: 633
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 63

Conread position: 234-852
Cow position:
Alignm length: 639
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 13

Conread position: 234-852
Cow position:
Alignm length: 630
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 15

Conread position: 236-855
Cow position:
Alignm length: 642
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 237-852
Cow position:
Alignm length: 635
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 328

Conread position: 237-852
Cow position:
Alignm length: 635
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 109

Conread position: 237-855
Cow position:
Alignm length: 629
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 401

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 47

Conread position: 237-855
Cow position:
Alignm length: 637
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 217

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 579

Conread position: 237-855
Cow position:
Alignm length: 640
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 531

Conread position: 237-855
Cow position:
Alignm length: 629
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 272

Conread position: 237-855
Cow position:
Alignm length: 641
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 638
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position:
Alignm length: 639
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 583

Conread position: 237-856
Cow position:
Alignm length: 639
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 624

Conread position: 239-855
Cow position:
Alignm length: 644
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 186

Conread position: 247-852
Cow position:
Alignm length: 623
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 68

Conread position: 247-856
Cow position:
Alignm length: 627
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 204

Conread position: 253-852
Cow position:
Alignm length: 620
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 76

Conread position: 253-852
Cow position:
Alignm length: 636
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 253-855
Cow position:
Alignm length: 621
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 68

Conread position: 274-837
Cow position:
Alignm length: 583
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 358

Conread position: 289-852
Cow position:
Alignm length: 582
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 383

Conread position: 292-850
Cow position:
Alignm length: 587
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 22

Conread position: 303-843
Cow position:
Alignm length: 556
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 46

Conread position: 322-855
Cow position:
Alignm length: 553
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 15

Conread position: 350-852
Cow position:
Alignm length: 523
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 25

Conread position: 350-855
Cow position:
Alignm length: 525
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 380-852
Cow position:
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 44

Conread position: 381-852
Cow position:
Alignm length: 490
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 402-855
Cow position:
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 419-843
Cow position:
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 145

Conread position: 419-852
Cow position:
Alignm length: 450
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 31

Conread position: 419-855
Cow position:
Alignm length: 455
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 433-855
Cow position:
Alignm length: 441
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 92

Conread position: 434-842
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 227

Conread position: 434-855
Cow position:
Alignm length: 440
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 436-855
Cow position:
Alignm length: 440
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 439-855
Cow position:
Alignm length: 435
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 448-846
Cow position:
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 23

Conread position: 455-852
Cow position:
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 191

Conread position: 470-855
Cow position:
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 471-855
Cow position:
Alignm length: 403
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 479-855
Cow position:
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 485-850
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 204

Conread position: 488-843
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 91, 34

Conread position: 493-847
Cow position:
Alignm length: 381
Alignm identity: 259
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 93, 146

Conread position: 501-855
Cow position:
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 515-855
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 521-851
Cow position:
Alignm length: 337
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 178, 64

Conread position: 521-851
Cow position:
Alignm length: 348
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 185

Conread position: 526-840
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 96

Conread position: 530-855
Cow position:
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 537-852
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 175

Conread position: 538-855
Cow position:
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 539-852
Cow position:
Alignm length: 340
Alignm identity: 221
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 5

Conread position: 554-852
Cow position:
Alignm length: 313
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 72

Conread position: 560-840
Cow position:
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 248

Conread position: 582-849
Cow position:
Alignm length: 274
Alignm identity: 200
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 25, 53

Conread position: 582-851
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 171, 109

Conread position: 582-852
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 86, 143

Conread position: 582-852
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 28

Conread position: 582-855
Cow position:
Alignm length: 279
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 117, 0

Conread position: 583-855
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 589-844
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 215

Conread position: 596-843
Cow position:
Alignm length: 252
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 597-852
Cow position:
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 32

Conread position: 598-855
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 600-843
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 204

Conread position: 602-855
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 5, 120

Conread position: 602-855
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 89, 0

Conread position: 606-848
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 198, 156

Conread position: 609-833
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 89, 194

Conread position: 628-852
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 138

Conread position: 629-852
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 47, 155

Conread position: 639-844
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 95

Conread position: 641-852
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 646-852
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 107, 48

Conread position: 652-855
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 653-855
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 662-855
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 125

Conread position: 667-855
Cow position:
Alignm length: 191
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 92, 142

Conread position: 668-855
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 669-855
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 675-843
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 125

Conread position: 675-852
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 12

Conread position: 677-846
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 76, 14

Conread position: 679-844
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 74, 12

Conread position: 684-855
Cow position:
Alignm length: 173
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 47

Conread position: 687-852
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 17

Conread position: 691-852
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 109

Conread position: 695-851
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 695-852
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 110, 104

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 695-856
Cow position:
Alignm length: 163
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 701-851
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 705-849
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 705-855
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.