Cow genome map

Conread name: Tra1-TCH01E080082

Conread position: 217-855
Cow position: chr3:36875326-36874665 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 32

Conread position: 217-856
Cow position: chr3:24443353-24442706 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 32

Conread position: 218-852
Cow position: chr3:26595783-26596422 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 30

Conread position: 218-852
Cow position: chr3:50920775-50921430 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 37

Conread position: 220-852
Cow position: chr3:20781676-20781067 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 9

Conread position: 226-832
Cow position: chr3:74848411-74847808 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 226-844
Cow position: chr3:53518586-53519188 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 23

Conread position: 226-851
Cow position: chr3:6896592-6897218 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 226-851
Cow position: chr3:81100836-81101470 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-852
Cow position: chr3:13276527-13275885 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-852
Cow position: chr3:16294160-16293524 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 34

Conread position: 226-852
Cow position: chr3:17938252-17937625 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 23

Conread position: 226-852
Cow position: chr3:18814256-18814898 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-852
Cow position: chr3:19753978-19753342 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 23

Conread position: 226-852
Cow position: chr3:23010122-23010748 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 23

Conread position: 226-852
Cow position: chr3:26992878-26993517 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 21

Conread position: 226-852
Cow position: chr3:43190520-43189880 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-852
Cow position: chr3:56645580-56644938 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 23

Conread position: 226-852
Cow position: chr3:57481986-57481353 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 23

Conread position: 226-852
Cow position: chr3:67545836-67545247 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 23

Conread position: 226-852
Cow position: chr3:69931084-69930444 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position: chr3:7477171-7476524 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 23

Conread position: 226-855
Cow position: chr3:10243411-10244055 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position: chr3:21179506-21178861 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position: chr3:23287585-23286941 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position: chr3:38095650-38096296 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position: chr3:38869324-38869962 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 23

Conread position: 226-855
Cow position: chr3:40826147-40826792 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 23

Conread position: 226-855
Cow position: chr3:45977252-45977895 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position: chr3:48603001-48603657 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 23

Conread position: 226-855
Cow position: chr3:49542451-49541812 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 30

Conread position: 226-855
Cow position: chr3:49998888-49999531 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 22

Conread position: 226-855
Cow position: chr3:56148040-56148691 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 23

Conread position: 226-855
Cow position: chr3:72632820-72633468 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 23

Conread position: 226-855
Cow position: chr3:75039092-75038446 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-856
Cow position: chr3:30321012-30321654 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 23

Conread position: 227-855
Cow position: chr3:6864418-6865054 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 22

Conread position: 228-855
Cow position: chr3:46505520-46506164 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 21

Conread position: 230-852
Cow position: chr3:32220484-32221103 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 108

Conread position: 232-852
Cow position: chr3:14452414-14453051 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 16

Conread position: 232-852
Cow position: chr3:57455726-57456337 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 20

Conread position: 232-855
Cow position: chr3:596874-597503 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 50

Conread position: 232-855
Cow position: chr3:21593038-21593678 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 515

Conread position: 232-855
Cow position: chr3:37971800-37972424 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 15

Conread position: 232-855
Cow position: chr3:49908258-49907637 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 357, 15

Conread position: 233-851
Cow position: chr3:77426460-77427066 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 16

Conread position: 234-842
Cow position: chr3:68697209-68696583 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 422

Conread position: 234-852
Cow position: chr3:83290177-83289555 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 18

Conread position: 234-855
Cow position: chr3:2866897-2866259 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 15

Conread position: 234-855
Cow position: chr3:3653526-3652906 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 15

Conread position: 234-855
Cow position: chr3:64653425-64654064 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 258

Conread position: 235-852
Cow position: chr3:45185223-45184595 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 12

Conread position: 236-852
Cow position: chr3:56719567-56718939 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 213

Conread position: 236-855
Cow position: chr3:30616179-30615545 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 215

Conread position: 237-840
Cow position: chr3:1740113-1739492 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 237-842
Cow position: chr3:53048024-53047409 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 142

Conread position: 237-850
Cow position: chr3:32490954-32490322 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-851
Cow position: chr3:40048648-40049280 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-852
Cow position: chr3:227114-226498 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 161

Conread position: 237-852
Cow position: chr3:34504364-34503743 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 448

Conread position: 237-852
Cow position: chr3:37627656-37628277 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 10

Conread position: 237-852
Cow position: chr3:56297143-56297777 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-852
Cow position: chr3:83767012-83767638 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 237-855
Cow position: chr3:15416225-15416862 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position: chr3:16225640-16226270 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 237-855
Cow position: chr3:18862200-18862836 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 195

Conread position: 237-855
Cow position: chr3:20379958-20379323 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 442

Conread position: 237-855
Cow position: chr3:24264961-24265594 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 309

Conread position: 237-855
Cow position: chr3:40337384-40336750 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 241

Conread position: 237-855
Cow position: chr3:46858524-46857888 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 265

Conread position: 237-855
Cow position: chr3:49605680-49605047 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 105

Conread position: 237-855
Cow position: chr3:53880508-53879871 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 241-852
Cow position: chr3:2904675-2904065 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 193

Conread position: 241-852
Cow position: chr3:45615115-45615720 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 398
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 95

Conread position: 247-852
Cow position: chr3:31934564-31933945 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 122

Conread position: 247-855
Cow position: chr3:54654412-54653779 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 231

Conread position: 249-852
Cow position: chr3:56101048-56101644 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 124

Conread position: 249-855
Cow position: chr3:2366118-2365514 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 125

Conread position: 250-852
Cow position: chr3:61677318-61677927 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 81

Conread position: 251-855
Cow position: chr3:37893607-37894227 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 233

Conread position: 253-851
Cow position: chr3:50461124-50461701 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 146

Conread position: 253-852
Cow position: chr3:61173273-61173884 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 28

Conread position: 253-855
Cow position: chr3:19883246-19883854 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 142

Conread position: 253-855
Cow position: chr3:26743095-26742477 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 90

Conread position: 253-855
Cow position: chr3:47078838-47078217 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 253-855
Cow position: chr3:50204321-50204960 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 253-855
Cow position: chr3:76864207-76864827 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 0

Conread position: 255-855
Cow position: chr3:65988697-65989305 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 216

Conread position: 256-852
Cow position: chr3:64376929-64376323 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 33

Conread position: 257-857
Cow position: chr3:64171009-64171637 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 95

Conread position: 258-833
Cow position: chr3:54087592-54087002 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 258-852
Cow position: chr3:7856205-7856814 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 294

Conread position: 258-852
Cow position: chr3:33326162-33326782 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 258-855
Cow position: chr3:6688592-6689225 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 575

Conread position: 262-855
Cow position: chr3:19880836-19881445 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 114

Conread position: 267-855
Cow position: chr3:72175520-72174910 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 171

Conread position: 271-852
Cow position: chr3:26566575-26567168 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 100

Conread position: 271-852
Cow position: chr3:40102053-40101466 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 38

Conread position: 272-844
Cow position: chr3:18886260-18886842 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 165

Conread position: 276-837
Cow position: chr3:66830140-66829568 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 48

Conread position: 278-852
Cow position: chr3:77726276-77726828 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 118

Conread position: 281-855
Cow position: chr3:64875590-64876168 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 80

Conread position: 289-841
Cow position: chr3:35342462-35343032 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 289-850
Cow position: chr3:56102554-56103130 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 10

Conread position: 289-852
Cow position: chr3:2834727-2834146 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 0

Conread position: 289-855
Cow position: chr3:28435887-28435303 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 295-851
Cow position: chr3:20795111-20795685 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 296-855
Cow position: chr3:7155988-7155411 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 296-855
Cow position: chr3:14679906-14680483 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 0

Conread position: 297-833
Cow position: chr3:14284554-14285107 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 345

Conread position: 298-855
Cow position: chr3:2572348-2572923 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 308-855
Cow position: chr3:6528823-6529388 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 0

Conread position: 310-852
Cow position: chr3:15663604-15663056 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 102

Conread position: 311-855
Cow position: chr3:823257-822694 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 314-855
Cow position: chr3:42846190-42846739 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 144

Conread position: 316-852
Cow position: chr3:63218793-63219322 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 133

Conread position: 318-852
Cow position: chr3:77225576-77226114 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 161

Conread position: 324-855
Cow position: chr3:73636728-73637275 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 325-841
Cow position: chr3:3983960-3984491 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 97

Conread position: 333-851
Cow position: chr3:12749756-12750288 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 452

Conread position: 334-855
Cow position: chr3:6837886-6838425 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 0

Conread position: 345-852
Cow position: chr3:35885246-35884728 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 101

Conread position: 350-852
Cow position: chr3:27547573-27547046 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 48

Conread position: 352-852
Cow position: chr3:45311667-45312171 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 98

Conread position: 355-855
Cow position: chr3:40521062-40520544 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 0

Conread position: 356-851
Cow position: chr3:30938379-30938890 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 62

Conread position: 357-852
Cow position: chr3:24455636-24455145 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 24

Conread position: 361-855
Cow position: chr3:65473314-65473822 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 276

Conread position: 370-852
Cow position: chr3:11384209-11384705 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 263

Conread position: 372-855
Cow position: chr3:13035601-13035100 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 373-855
Cow position: chr3:11417442-11417942 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 0

Conread position: 382-855
Cow position: chr3:78519952-78520443 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 329

Conread position: 392-856
Cow position: chr3:68273755-68274237 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 398-852
Cow position: chr3:31224200-31224667 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 127

Conread position: 402-855
Cow position: chr3:302156-302617 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 253

Conread position: 403-855
Cow position: chr3:20475439-20475903 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 266

Conread position: 409-851
Cow position: chr3:39327480-39327937 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 220

Conread position: 409-855
Cow position: chr3:41019382-41018915 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 412-835
Cow position: chr3:38862670-38863095 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 127

Conread position: 413-855
Cow position: chr3:65084870-65085329 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 334

Conread position: 419-852
Cow position: chr3:4039989-4039537 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 55

Conread position: 419-855
Cow position: chr3:47986383-47986835 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 65

Conread position: 421-855
Cow position: chr3:56696792-56697233 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 287

Conread position: 422-852
Cow position: chr3:34557425-34556985 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 275

Conread position: 422-855
Cow position: chr3:49930780-49931231 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 423-851
Cow position: chr3:6442015-6442460 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 44

Conread position: 423-852
Cow position: chr3:25056635-25057073 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 228

Conread position: 423-855
Cow position: chr3:19215862-19216296 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 27

Conread position: 423-855
Cow position: chr3:36121121-36121571 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 424-855
Cow position: chr3:35918511-35918955 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 249

Conread position: 426-852
Cow position: chr3:27454984-27454544 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 426-852
Cow position: chr3:57531079-57531525 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 281
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 105

Conread position: 428-847
Cow position: chr3:3031202-3031619 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 86

Conread position: 428-855
Cow position: chr3:2074734-2075176 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 73

Conread position: 435-855
Cow position: chr3:42508251-42507818 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 308

Conread position: 439-852
Cow position: chr3:12667663-12668093 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 234

Conread position: 439-855
Cow position: chr3:14212352-14212786 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 441-852
Cow position: chr3:23497794-23497365 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 381

Conread position: 441-855
Cow position: chr3:35619521-35619948 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 218

Conread position: 443-838
Cow position: chr3:69962886-69962469 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 453-852
Cow position: chr3:8605924-8605521 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 22

Conread position: 464-852
Cow position: chr3:19718272-19717876 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 199

Conread position: 467-852
Cow position: chr3:49387642-49388040 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 168

Conread position: 470-855
Cow position: chr3:73451321-73450918 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 470-856
Cow position: chr3:33125262-33124858 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 471-855
Cow position: chr3:55245537-55245939 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 474-796
Cow position: chr3:2627180-2627500 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 92, 180

Conread position: 476-842
Cow position: chr3:3300634-3301024 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 476-852
Cow position: chr3:54863622-54863229 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 40

Conread position: 479-852
Cow position: chr3:37983363-37982973 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 55

Conread position: 479-855
Cow position: chr3:45675776-45675382 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 480-852
Cow position: chr3:56160814-56160432 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 155

Conread position: 482-852
Cow position: chr3:42983234-42982864 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 228
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 170

Conread position: 487-856
Cow position: chr3:62794067-62793684 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 185

Conread position: 488-852
Cow position: chr3:52257504-52257133 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 200

Conread position: 491-855
Cow position: chr3:49416834-49416451 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 493-855
Cow position: chr3:14438969-14438592 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 139

Conread position: 500-855
Cow position: chr3:46752872-46753242 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 53

Conread position: 506-852
Cow position: chr3:3885168-3884794 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 81, 317

Conread position: 506-852
Cow position: chr3:15082905-15082551 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 258

Conread position: 514-855
Cow position: chr3:42186506-42186864 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 290

Conread position: 515-855
Cow position: chr3:6785355-6785712 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 261

Conread position: 516-855
Cow position: chr3:26722774-26722416 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 517-855
Cow position: chr3:5886926-5887279 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 160

Conread position: 530-852
Cow position: chr3:19795039-19794699 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 287

Conread position: 534-838
Cow position: chr3:30622930-30623253 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 543-855
Cow position: chr3:41207483-41207170 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 35

Conread position: 545-842
Cow position: chr3:73416065-73416381 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 546-855
Cow position: chr3:59864551-59864875 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 99

Conread position: 549-855
Cow position: chr3:579246-579568 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 549-855
Cow position: chr3:36416811-36417135 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 550-852
Cow position: chr3:33469572-33469273 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 175, 78

Conread position: 554-855
Cow position: chr3:75772058-75771739 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 223

Conread position: 558-831
Cow position: chr3:17059365-17059096 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 59

Conread position: 559-850
Cow position: chr3:23217242-23216944 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 30, 158

Conread position: 559-852
Cow position: chr3:29582206-29582501 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 21

Conread position: 560-834
Cow position: chr3:13248926-13248649 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 561-852
Cow position: chr3:64282220-64281928 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 102

Conread position: 565-852
Cow position: chr3:14279790-14280072 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 9

Conread position: 570-855
Cow position: chr3:28471462-28471745 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 121, 22

Conread position: 575-852
Cow position: chr3:24275680-24275964 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 132, 230

Conread position: 578-851
Cow position: chr3:173620-173896 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 10

Conread position: 578-852
Cow position: chr3:70322559-70322282 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 112, 74

Conread position: 579-855
Cow position: chr3:26891605-26891886 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 582-849
Cow position: chr3:35056099-35056366 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 50

Conread position: 582-851
Cow position: chr3:58129208-58129483 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 229

Conread position: 582-852
Cow position: chr3:2852119-2851853 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 171, 63

Conread position: 582-852
Cow position: chr3:7677611-7677882 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 109, 39

Conread position: 582-852
Cow position: chr3:46682951-46683225 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 257

Conread position: 582-852
Cow position: chr3:51254518-51254788 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 42

Conread position: 582-852
Cow position: chr3:52651823-52651562 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 181, 93

Conread position: 582-852
Cow position: chr3:77366566-77366314 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 177, 52

Conread position: 582-855
Cow position: chr3:2117564-2117841 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 194

Conread position: 582-855
Cow position: chr3:21779660-21779382 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 582-855
Cow position: chr3:35043277-35043555 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 583-834
Cow position: chr3:13117934-13117687 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 35

Conread position: 584-851
Cow position: chr3:34464487-34464755 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 584-855
Cow position: chr3:69271721-69271997 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 587-855
Cow position: chr3:65536237-65536510 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 104, 0

Conread position: 588-850
Cow position: chr3:10371500-10371762 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 45

Conread position: 589-852
Cow position: chr3:37599861-37600123 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 44

Conread position: 589-852
Cow position: chr3:42500195-42500455 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 71

Conread position: 592-852
Cow position: chr3:17460352-17460609 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 73, 28

Conread position: 594-852
Cow position: chr3:4017636-4017894 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 103, 40

Conread position: 594-852
Cow position: chr3:33254729-33254470 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 15

Conread position: 595-851
Cow position: chr3:37451231-37451493 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 105, 219

Conread position: 595-852
Cow position: chr3:15988070-15988332 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 208

Conread position: 595-855
Cow position: chr3:70215302-70215567 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 596-852
Cow position: chr3:58766275-58766536 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 202

Conread position: 596-855
Cow position: chr3:11784495-11784755 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 158

Conread position: 597-843
Cow position: chr3:20999939-20999688 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 102, 0

Conread position: 597-851
Cow position: chr3:14922785-14923044 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 103, 0

Conread position: 597-855
Cow position: chr3:14028118-14028381 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 94, 0

Conread position: 599-852
Cow position: chr3:46006239-46006485 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 200, 10

Conread position: 605-855
Cow position: chr3:39921804-39921550 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 97, 53

Conread position: 606-851
Cow position: chr3:25753396-25753644 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 69, 197

Conread position: 610-844
Cow position: chr3:60932413-60932650 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 95, 53

Conread position: 614-855
Cow position: chr3:68500609-68500856 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 84, 0

Conread position: 615-846
Cow position: chr3:14634080-14633855 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 82, 100

Conread position: 616-856
Cow position: chr3:40205555-40205800 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 75, 0

Conread position: 623-844
Cow position: chr3:74391747-74391526 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 136, 164

Conread position: 628-852
Cow position: chr3:14613196-14613420 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 72, 114

Conread position: 628-852
Cow position: chr3:17864593-17864822 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 70, 34

Conread position: 628-852
Cow position: chr3:76136482-76136714 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 628-855
Cow position: chr3:12931930-12932162 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 63, 0

Conread position: 629-855
Cow position: chr3:59118614-59118383 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 62, 0

Conread position: 634-855
Cow position: chr3:30752754-30752979 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 57, 11

Conread position: 637-848
Cow position: chr3:45880916-45881126 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 26

Conread position: 637-855
Cow position: chr3:68043332-68043110 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 62, 97

Conread position: 638-855
Cow position: chr3:28765238-28765016 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 638-855
Cow position: chr3:39231885-39232107 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 641-843
Cow position: chr3:73763454-73763248 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 157

Conread position: 641-855
Cow position: chr3:6024682-6024463 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 644-855
Cow position: chr3:36594878-36595094 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 652-844
Cow position: chr3:61538793-61538984 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 107, 54

Conread position: 652-855
Cow position: chr3:20074275-20074483 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 658-842
Cow position: chr3:39878984-39878796 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 658-851
Cow position: chr3:54876857-54877051 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 145

Conread position: 659-852
Cow position: chr3:18184117-18184304 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 8

Conread position: 660-855
Cow position: chr3:13291301-13291500 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 660-855
Cow position: chr3:19958790-19958990 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 661-855
Cow position: chr3:64293722-64293916 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 73

Conread position: 663-855
Cow position: chr3:58336505-58336702 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 664-841
Cow position: chr3:16156723-16156904 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 666-855
Cow position: chr3:29281961-29282155 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 669-850
Cow position: chr3:21082077-21082256 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 37

Conread position: 669-852
Cow position: chr3:18460490-18460303 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 19, 73

Conread position: 670-852
Cow position: chr3:23944178-23944357 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 30

Conread position: 673-852
Cow position: chr3:48528235-48528427 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 138

Conread position: 675-855
Cow position: chr3:51256152-51256334 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 677-855
Cow position: chr3:65178590-65178766 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 684-852
Cow position: chr3:26974415-26974247 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 109

Conread position: 689-852
Cow position: chr3:9639784-9639621 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 29

Conread position: 695-852
Cow position: chr3:18252782-18252935 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 68, 36

Conread position: 695-852
Cow position: chr3:59607527-59607684 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 110, 104

Conread position: 695-855
Cow position: chr3:6170706-6170867 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position: chr3:11411814-11411653 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position: chr3:50217226-50217387 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position: chr3:81375017-81374856 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 697-855
Cow position: chr3:52045783-52045624 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 703-852
Cow position: chr3:60891501-60891657 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 97

Conread position: 704-852
Cow position: chr3:39970824-39970676 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 28

Conread position: 704-855
Cow position: chr3:6884388-6884541 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 704-855
Cow position: chr3:21100047-21100199 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 704-855
Cow position: chr3:45947281-45947130 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 77

Conread position: 706-855
Cow position: chr3:37020970-37020820 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 714-851
Cow position: chr3:80564054-80564192 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 85

Conread position: 714-852
Cow position: chr3:16332674-16332812 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 715-843
Cow position: chr3:37040545-37040674 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 717-852
Cow position: chr3:11446693-11446826 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 726-852
Cow position: chr3:75479127-75479253 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 21

Show alignments to all cow chromosomes.