Cow genome map

Conread name: Tra1-TCH01E080082

Conread position: 219-851
Cow position: chr4:11108522-11107890 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 7

Conread position: 219-855
Cow position: chr4:3069470-3070110 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 30

Conread position: 226-842
Cow position: chr4:2350161-2349531 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 23

Conread position: 226-843
Cow position: chr4:10045212-10044578 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-849
Cow position: chr4:36898932-36899572 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-851
Cow position: chr4:16362758-16363397 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-851
Cow position: chr4:34712364-34713013 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 23

Conread position: 226-852
Cow position: chr4:1028668-1028025 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 81

Conread position: 226-852
Cow position: chr4:1239863-1239234 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 22

Conread position: 226-852
Cow position: chr4:44733181-44733817 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 23

Conread position: 226-855
Cow position: chr4:358440-359083 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 23

Conread position: 226-855
Cow position: chr4:3449351-3450003 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 30

Conread position: 226-855
Cow position: chr4:4378947-4379574 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 383, 23

Conread position: 226-855
Cow position: chr4:10884192-10884839 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 26

Conread position: 226-855
Cow position: chr4:17876524-17877159 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 29

Conread position: 226-855
Cow position: chr4:23304786-23304140 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position: chr4:25596931-25596285 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 23

Conread position: 226-855
Cow position: chr4:33496116-33496760 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 23

Conread position: 226-855
Cow position: chr4:36026715-36026070 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position: chr4:43317094-43316448 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 23

Conread position: 226-855
Cow position: chr4:48029417-48030059 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-855
Cow position: chr4:54758678-54758054 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 23

Conread position: 226-855
Cow position: chr4:57987299-57987944 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 226-856
Cow position: chr4:6487812-6487166 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 363, 23

Conread position: 228-855
Cow position: chr4:27177385-27178028 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 21

Conread position: 229-852
Cow position: chr4:64038809-64039405 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 230-855
Cow position: chr4:20242713-20243357 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 232-852
Cow position: chr4:22074513-22073901 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 167

Conread position: 232-852
Cow position: chr4:44593814-44593205 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 17

Conread position: 232-855
Cow position: chr4:27288538-27287906 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 233-852
Cow position: chr4:27539228-27539860 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 236

Conread position: 233-856
Cow position: chr4:38180329-38180956 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 15

Conread position: 234-795
Cow position: chr4:13328236-13328820 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 15

Conread position: 234-836
Cow position: chr4:35929047-35929665 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 234-851
Cow position: chr4:8673300-8673919 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 15

Conread position: 234-851
Cow position: chr4:15874071-15873442 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 15

Conread position: 234-852
Cow position: chr4:23452449-23451826 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 15

Conread position: 234-855
Cow position: chr4:9040508-9041147 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 0

Conread position: 236-852
Cow position: chr4:55510271-55509657 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 297

Conread position: 237-842
Cow position: chr4:58291305-58291927 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 450

Conread position: 237-850
Cow position: chr4:5611433-5610815 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 10

Conread position: 237-851
Cow position: chr4:65430846-65431467 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 237-855
Cow position: chr4:606175-606806 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 577

Conread position: 237-855
Cow position: chr4:6266649-6266015 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 248

Conread position: 237-855
Cow position: chr4:7778964-7779601 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 237-855
Cow position: chr4:9356802-9357439 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position: chr4:17033938-17033300 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position: chr4:17821095-17821731 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 0

Conread position: 237-855
Cow position: chr4:18336390-18335750 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 45

Conread position: 237-855
Cow position: chr4:20657495-20656864 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 237-855
Cow position: chr4:21341637-21342274 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position: chr4:40217402-40218039 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position: chr4:40697903-40697266 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 237-855
Cow position: chr4:41473266-41472629 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-855
Cow position: chr4:41961461-41962097 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 258

Conread position: 237-855
Cow position: chr4:47263341-47263978 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 0

Conread position: 237-855
Cow position: chr4:54811297-54810646 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 106

Conread position: 237-855
Cow position: chr4:62907457-62906821 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 237-856
Cow position: chr4:17234591-17235222 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 106

Conread position: 239-855
Cow position: chr4:64875457-64874826 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 156

Conread position: 240-852
Cow position: chr4:66174752-66174123 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 213

Conread position: 246-852
Cow position: chr4:67601093-67600477 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 159

Conread position: 249-849
Cow position: chr4:19236647-19237262 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 215

Conread position: 251-855
Cow position: chr4:43883673-43884294 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 201

Conread position: 253-852
Cow position: chr4:3284776-3284160 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 186

Conread position: 253-852
Cow position: chr4:33021051-33020434 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 0

Conread position: 253-852
Cow position: chr4:44778612-44777994 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 560

Conread position: 253-855
Cow position: chr4:1928040-1927434 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 78

Conread position: 255-855
Cow position: chr4:3169864-3170481 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 0

Conread position: 256-855
Cow position: chr4:10424076-10424693 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 85

Conread position: 258-843
Cow position: chr4:65890387-65890970 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 25

Conread position: 258-852
Cow position: chr4:22316315-22316922 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 211

Conread position: 259-855
Cow position: chr4:35867804-35868388 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 287

Conread position: 274-852
Cow position: chr4:43841370-43840783 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 55

Conread position: 275-852
Cow position: chr4:30507799-30508396 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 60

Conread position: 278-852
Cow position: chr4:18813603-18813012 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 38

Conread position: 289-855
Cow position: chr4:10135580-10135004 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 32

Conread position: 290-834
Cow position: chr4:27293267-27292709 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 129

Conread position: 295-851
Cow position: chr4:1500449-1499894 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 125

Conread position: 297-855
Cow position: chr4:18004340-18004915 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 204

Conread position: 311-852
Cow position: chr4:44900914-44901451 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 125

Conread position: 324-852
Cow position: chr4:4184828-4185374 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 29

Conread position: 324-855
Cow position: chr4:26886271-26885722 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 0

Conread position: 327-837
Cow position: chr4:14918713-14919219 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 13

Conread position: 330-855
Cow position: chr4:38583539-38584078 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 350

Conread position: 348-851
Cow position: chr4:34700872-34700360 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 83

Conread position: 350-841
Cow position: chr4:33831752-33831243 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 0

Conread position: 350-852
Cow position: chr4:26548149-26548666 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 355-855
Cow position: chr4:35144862-35144344 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 0

Conread position: 360-852
Cow position: chr4:65581203-65581717 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 455

Conread position: 361-851
Cow position: chr4:16967591-16967105 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 204

Conread position: 362-855
Cow position: chr4:60855450-60855961 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 8

Conread position: 377-855
Cow position: chr4:38153597-38153099 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 102

Conread position: 381-852
Cow position: chr4:962877-962395 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 98

Conread position: 381-852
Cow position: chr4:4086652-4086172 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 125

Conread position: 389-855
Cow position: chr4:15463708-15463231 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 11

Conread position: 391-855
Cow position: chr4:3355217-3354741 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 12

Conread position: 392-855
Cow position: chr4:10122130-10122607 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 144

Conread position: 393-855
Cow position: chr4:65199080-65198600 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 396-855
Cow position: chr4:18330810-18331287 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 400-831
Cow position: chr4:3849329-3849775 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 69

Conread position: 406-855
Cow position: chr4:6035293-6034826 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 409-846
Cow position: chr4:48496414-48496869 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 431-855
Cow position: chr4:2227005-2226563 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 85

Conread position: 436-855
Cow position: chr4:161847-162281 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 26

Conread position: 439-855
Cow position: chr4:3962121-3961695 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 439-855
Cow position: chr4:15617461-15617895 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 11

Conread position: 448-852
Cow position: chr4:26399566-26399984 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 96

Conread position: 449-855
Cow position: chr4:62454210-62453787 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 208

Conread position: 451-855
Cow position: chr4:47115616-47116037 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 8

Conread position: 453-851
Cow position: chr4:5914109-5914524 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 280
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 132, 73

Conread position: 453-855
Cow position: chr4:47949558-47949138 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 460-844
Cow position: chr4:1369267-1368878 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 66

Conread position: 464-797
Cow position: chr4:31588234-31587886 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 8

Conread position: 470-855
Cow position: chr4:62962561-62962159 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 94

Conread position: 472-852
Cow position: chr4:61710417-61710037 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 77, 34

Conread position: 480-855
Cow position: chr4:26875099-26874707 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 74

Conread position: 482-855
Cow position: chr4:6806117-6806508 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 485-846
Cow position: chr4:54972863-54973242 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 332

Conread position: 485-855
Cow position: chr4:20616905-20616517 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 490-852
Cow position: chr4:5441827-5441463 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 17

Conread position: 491-852
Cow position: chr4:16606329-16605977 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 214, 86

Conread position: 493-852
Cow position: chr4:22025269-22024892 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 263
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 74

Conread position: 499-842
Cow position: chr4:18844635-18844986 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 127

Conread position: 499-855
Cow position: chr4:60225045-60224674 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 505-852
Cow position: chr4:20090944-20091298 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 159

Conread position: 515-835
Cow position: chr4:9796508-9796172 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 14, 154

Conread position: 518-855
Cow position: chr4:33171002-33171357 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 521-842
Cow position: chr4:22850822-22850487 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 82, 292

Conread position: 530-850
Cow position: chr4:61449370-61449709 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 530-852
Cow position: chr4:62569573-62569882 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 145, 45

Conread position: 530-852
Cow position: chr4:68880372-68880715 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 59, 15

Conread position: 531-855
Cow position: chr4:19956884-19957228 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 534-855
Cow position: chr4:19049123-19049462 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 536-855
Cow position: chr4:4850205-4850542 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 537-852
Cow position: chr4:2139936-2140256 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 211
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 16, 100

Conread position: 537-855
Cow position: chr4:38564829-38564493 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 538-855
Cow position: chr4:36073887-36074221 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 148

Conread position: 545-792
Cow position: chr4:10553120-10553380 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 73

Conread position: 547-852
Cow position: chr4:15814419-15814104 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 139

Conread position: 557-852
Cow position: chr4:65816772-65816462 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 29, 139

Conread position: 575-842
Cow position: chr4:23437564-23437295 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 119, 17

Conread position: 575-852
Cow position: chr4:42639376-42639098 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 136

Conread position: 577-855
Cow position: chr4:2191378-2191093 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 582-826
Cow position: chr4:61724164-61724410 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 93, 76

Conread position: 582-846
Cow position: chr4:2601135-2601396 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 109, 34

Conread position: 582-849
Cow position: chr4:25225909-25226166 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 32, 26

Conread position: 582-849
Cow position: chr4:27996699-27996964 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 116, 73

Conread position: 582-852
Cow position: chr4:33181365-33181088 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 167

Conread position: 582-852
Cow position: chr4:45499107-45499369 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 93, 36

Conread position: 582-855
Cow position: chr4:7049140-7048869 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 117, 185

Conread position: 582-855
Cow position: chr4:15802916-15802638 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 582-855
Cow position: chr4:16641741-16642019 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 582-855
Cow position: chr4:17068185-17067912 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 117, 45

Conread position: 582-855
Cow position: chr4:49744594-49744872 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 582-855
Cow position: chr4:60580207-60579929 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 583-797
Cow position: chr4:61191912-61192124 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 176, 108

Conread position: 588-855
Cow position: chr4:54162134-54161862 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 589-852
Cow position: chr4:11026285-11026025 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 111, 165

Conread position: 589-852
Cow position: chr4:34167103-34166847 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 110, 173

Conread position: 590-855
Cow position: chr4:30474310-30474580 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 595-852
Cow position: chr4:19140938-19141200 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 96, 218

Conread position: 596-797
Cow position: chr4:25192940-25192741 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 109, 59

Conread position: 596-844
Cow position: chr4:11200805-11201057 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 109, 208

Conread position: 597-852
Cow position: chr4:21364015-21364266 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 156, 36

Conread position: 597-855
Cow position: chr4:43896568-43896296 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 606-844
Cow position: chr4:32249439-32249684 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 93, 40

Conread position: 606-855
Cow position: chr4:1006840-1007093 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 112

Conread position: 609-852
Cow position: chr4:55520303-55520551 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 194

Conread position: 616-855
Cow position: chr4:63195622-63195379 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 75, 160

Conread position: 630-855
Cow position: chr4:6445732-6445961 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 176

Conread position: 638-852
Cow position: chr4:22237428-22237219 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 55

Conread position: 652-855
Cow position: chr4:5882468-5882676 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 655-852
Cow position: chr4:48798663-48798466 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 155

Conread position: 660-855
Cow position: chr4:59452516-59452317 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 24

Conread position: 660-855
Cow position: chr4:64155729-64155929 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 662-852
Cow position: chr4:54170425-54170623 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 666-855
Cow position: chr4:24179471-24179277 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 668-852
Cow position: chr4:22014408-22014224 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 96

Conread position: 669-851
Cow position: chr4:43898871-43898687 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 673-855
Cow position: chr4:61817390-61817203 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 682-852
Cow position: chr4:7806196-7806366 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 77, 5

Conread position: 684-855
Cow position: chr4:47269196-47269368 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 687-852
Cow position: chr4:15119017-15119183 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 113

Conread position: 695-850
Cow position: chr4:22102314-22102158 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 695-851
Cow position: chr4:61065716-61065868 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 695-855
Cow position: chr4:14163826-14163987 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 100

Conread position: 695-855
Cow position: chr4:14642374-14642535 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position: chr4:14684251-14684412 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position: chr4:21045121-21044960 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 695-855
Cow position: chr4:39421635-39421796 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 704-852
Cow position: chr4:11872800-11872652 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 705-852
Cow position: chr4:54502240-54502095 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 707-852
Cow position: chr4:8760332-8760478 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 714-833
Cow position: chr4:53544523-53544644 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 738-852
Cow position: chr4:18107924-18108039 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 61

Show alignments to all cow chromosomes.