Cow genome map
| Conread name: | Tra1-TCH01E080082 |
| Conread position: | 219-852 |
| Cow position: | chr5:8997378-8996713 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 220-852 |
| Cow position: | chr5:26466293-26466922 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 226-842 |
| Cow position: | chr5:63312860-63312236 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 21 |
| Conread position: | 226-843 |
| Cow position: | chr5:27178303-27178924 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 29 |
| Conread position: | 226-843 |
| Cow position: | chr5:30293974-30294592 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 226-851 |
| Cow position: | chr5:31916303-31916908 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 226-851 |
| Cow position: | chr5:54721314-54721949 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 226-852 |
| Cow position: | chr5:24298669-24299311 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 23 |
| Conread position: | 226-852 |
| Cow position: | chr5:29742901-29742263 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 226-852 |
| Cow position: | chr5:49521369-49522001 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:1339267-1338620 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:4387840-4388482 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:6152177-6151531 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:10921497-10922146 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:14636923-14636278 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 26 |
| Conread position: | 226-855 |
| Cow position: | chr5:19979260-19978613 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:24101306-24101951 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:30581992-30582627 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 40 |
| Conread position: | 226-855 |
| Cow position: | chr5:32755788-32755150 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:37735030-37735676 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 226-855 |
| Cow position: | chr5:44709724-44709071 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:46735621-46734976 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:48805795-48805169 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:51745878-51746519 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 23 |
| Conread position: | 226-855 |
| Cow position: | chr5:58771214-58770571 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 26 |
| Conread position: | 226-855 |
| Cow position: | chr5:64779352-64778700 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 23 |
| Conread position: | 227-855 |
| Cow position: | chr5:3501471-3500827 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 227-855 |
| Cow position: | chr5:3788884-3789524 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 22 |
| Conread position: | 227-855 |
| Cow position: | chr5:54786451-54785807 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 22 |
| Conread position: | 229-851 |
| Cow position: | chr5:69519263-69519897 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 230-842 |
| Cow position: | chr5:47471040-47471684 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 19 |
| Conread position: | 230-852 |
| Cow position: | chr5:46626607-46625979 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 11 |
| Conread position: | 231-856 |
| Cow position: | chr5:6031641-6032279 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 232-855 |
| Cow position: | chr5:58191576-58192216 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 517 |
| Conread position: | 234-842 |
| Cow position: | chr5:34191586-34192208 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 15 |
| Conread position: | 234-844 |
| Cow position: | chr5:59146038-59146667 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 49 |
| Conread position: | 234-852 |
| Cow position: | chr5:18883924-18883312 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 14 |
| Conread position: | 234-852 |
| Cow position: | chr5:46671278-46671902 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 12 |
| Conread position: | 234-852 |
| Cow position: | chr5:48225910-48225281 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 175 |
| Conread position: | 234-855 |
| Cow position: | chr5:2917127-2917762 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 15 |
| Conread position: | 234-855 |
| Cow position: | chr5:5925297-5924676 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 312 |
| Conread position: | 234-855 |
| Cow position: | chr5:14543638-14543000 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 254 |
| Conread position: | 236-855 |
| Cow position: | chr5:443647-443008 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 236-855 |
| Cow position: | chr5:5105888-5106524 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 329 |
| Conread position: | 236-855 |
| Cow position: | chr5:10543007-10542375 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 185 |
| Conread position: | 237-850 |
| Cow position: | chr5:28015712-28016352 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 271 |
| Conread position: | 237-851 |
| Cow position: | chr5:46666738-46667371 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-852 |
| Cow position: | chr5:9003446-9002812 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-852 |
| Cow position: | chr5:49117685-49117053 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 19 |
| Conread position: | 237-852 |
| Cow position: | chr5:64845595-64844970 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 237-855 |
| Cow position: | chr5:4434840-4434203 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-855 |
| Cow position: | chr5:4963714-4963085 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 141 |
| Conread position: | 237-855 |
| Cow position: | chr5:6585796-6585153 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-855 |
| Cow position: | chr5:6772232-6772866 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 395 |
| Conread position: | 237-855 |
| Cow position: | chr5:12133266-12133894 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 237-855 |
| Cow position: | chr5:29634093-29634730 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 237-855 |
| Cow position: | chr5:37379753-37380387 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 195 |
| Conread position: | 237-855 |
| Cow position: | chr5:37625525-37626147 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 243 |
| Conread position: | 237-855 |
| Cow position: | chr5:42282835-42283464 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 237-855 |
| Cow position: | chr5:48025934-48026569 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 284 |
| Conread position: | 237-855 |
| Cow position: | chr5:51166642-51166009 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 237-855 |
| Cow position: | chr5:52823542-52822907 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 289 |
| Conread position: | 237-855 |
| Cow position: | chr5:58198675-58199310 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 352, 510 |
| Conread position: | 237-855 |
| Cow position: | chr5:59064109-59064744 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 186 |
| Conread position: | 237-855 |
| Cow position: | chr5:72856538-72857176 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 214 |
| Conread position: | 239-855 |
| Cow position: | chr5:21188889-21189519 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 106 |
| Conread position: | 243-852 |
| Cow position: | chr5:62377063-62377663 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 249-852 |
| Cow position: | chr5:5936980-5937604 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 69 |
| Conread position: | 249-855 |
| Cow position: | chr5:7395930-7396544 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 32 |
| Conread position: | 253-836 |
| Cow position: | chr5:60464-59868 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 154 |
| Conread position: | 253-852 |
| Cow position: | chr5:32165230-32164638 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 13 |
| Conread position: | 253-852 |
| Cow position: | chr5:48575133-48574529 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 279 |
| Conread position: | 253-855 |
| Cow position: | chr5:41066706-41067311 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 356, 344 |
| Conread position: | 259-852 |
| Cow position: | chr5:58003925-58004527 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 61 |
| Conread position: | 259-855 |
| Cow position: | chr5:18119288-18118674 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 0 |
| Conread position: | 265-852 |
| Cow position: | chr5:52830087-52829489 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 377 |
| Conread position: | 269-833 |
| Cow position: | chr5:24633341-24632760 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 23 |
| Conread position: | 269-855 |
| Cow position: | chr5:18667004-18667608 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 147 |
| Conread position: | 269-855 |
| Cow position: | chr5:47560864-47560259 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 0 |
| Conread position: | 273-852 |
| Cow position: | chr5:13258301-13258884 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 196 |
| Conread position: | 283-855 |
| Cow position: | chr5:46817388-46816802 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 11 |
| Conread position: | 292-852 |
| Cow position: | chr5:31634141-31634734 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 135 |
| Conread position: | 295-852 |
| Cow position: | chr5:51684911-51684319 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 466 |
| Conread position: | 299-852 |
| Cow position: | chr5:49565304-49565862 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 300-855 |
| Cow position: | chr5:1059839-1059266 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 301-855 |
| Cow position: | chr5:73486168-73485585 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 58 |
| Conread position: | 302-852 |
| Cow position: | chr5:22857896-22857335 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 48 |
| Conread position: | 308-852 |
| Cow position: | chr5:53834390-53834950 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 140 |
| Conread position: | 315-856 |
| Cow position: | chr5:34670340-34669787 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 33 |
| Conread position: | 323-852 |
| Cow position: | chr5:3695115-3695634 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 323-855 |
| Cow position: | chr5:31709051-31709601 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 331-852 |
| Cow position: | chr5:33776008-33775489 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 216 |
| Conread position: | 345-855 |
| Cow position: | chr5:54136865-54136337 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 0 |
| Conread position: | 352-855 |
| Cow position: | chr5:25912512-25913019 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 353-849 |
| Cow position: | chr5:10262498-10261981 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 358-852 |
| Cow position: | chr5:34299676-34300179 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 310 |
| Conread position: | 368-855 |
| Cow position: | chr5:3544104-3544597 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 82 |
| Conread position: | 370-855 |
| Cow position: | chr5:24577235-24577737 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 8 |
| Conread position: | 378-855 |
| Cow position: | chr5:46676419-46676914 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 380-855 |
| Cow position: | chr5:20108219-20107729 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 427 |
| Conread position: | 385-855 |
| Cow position: | chr5:55630877-55631365 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 387-844 |
| Cow position: | chr5:26135458-26134978 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 434 |
| Conread position: | 397-855 |
| Cow position: | chr5:34683535-34683061 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 350 |
| Conread position: | 402-851 |
| Cow position: | chr5:4629600-4630057 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 67 |
| Conread position: | 402-852 |
| Cow position: | chr5:42743644-42744088 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 23 |
| Conread position: | 402-855 |
| Cow position: | chr5:27907636-27907167 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 328 |
| Conread position: | 404-852 |
| Cow position: | chr5:18491238-18491706 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 415 |
| Conread position: | 410-849 |
| Cow position: | chr5:47872268-47871813 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 221 |
| Conread position: | 419-852 |
| Cow position: | chr5:18405204-18404760 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 116 |
| Conread position: | 419-852 |
| Cow position: | chr5:21827674-21828118 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 78 |
| Conread position: | 420-855 |
| Cow position: | chr5:54952274-54951821 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 422-856 |
| Cow position: | chr5:49911859-49912306 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 117, 57 |
| Conread position: | 430-837 |
| Cow position: | chr5:36907204-36906779 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 434-852 |
| Cow position: | chr5:38268391-38268828 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 145, 125 |
| Conread position: | 439-855 |
| Cow position: | chr5:36370125-36369691 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 441-850 |
| Cow position: | chr5:25920904-25920491 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 56 |
| Conread position: | 443-852 |
| Cow position: | chr5:70607184-70607598 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 133, 72 |
| Conread position: | 446-855 |
| Cow position: | chr5:26052605-26053032 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 5 |
| Conread position: | 454-855 |
| Cow position: | chr5:47342756-47343174 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 175 |
| Conread position: | 464-855 |
| Cow position: | chr5:27549598-27549213 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 28 |
| Conread position: | 466-850 |
| Cow position: | chr5:42676154-42676539 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 132 |
| Conread position: | 475-852 |
| Cow position: | chr5:70771069-70771448 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 159, 58 |
| Conread position: | 476-856 |
| Cow position: | chr5:19970128-19969740 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 111, 228 |
| Conread position: | 479-852 |
| Cow position: | chr5:34285569-34285186 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 110, 175 |
| Conread position: | 488-837 |
| Cow position: | chr5:24158851-24159218 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 491-855 |
| Cow position: | chr5:21187853-21188235 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 492-852 |
| Cow position: | chr5:23648505-23648132 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 73, 302 |
| Conread position: | 501-855 |
| Cow position: | chr5:45179917-45179546 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 511-852 |
| Cow position: | chr5:6576653-6576294 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 511-852 |
| Cow position: | chr5:68593372-68593718 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 42 |
| Conread position: | 511-855 |
| Cow position: | chr5:8178078-8178435 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 106 |
| Conread position: | 520-852 |
| Cow position: | chr5:46707594-46707935 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 521-855 |
| Cow position: | chr5:57336413-57336063 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 522-830 |
| Cow position: | chr5:28947454-28947135 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 67, 108 |
| Conread position: | 525-855 |
| Cow position: | chr5:34708722-34709070 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 528-852 |
| Cow position: | chr5:40270883-40270546 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 530-851 |
| Cow position: | chr5:58461739-58461396 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 216 |
| Conread position: | 530-852 |
| Cow position: | chr5:54088688-54089011 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 531-852 |
| Cow position: | chr5:72046705-72046366 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 5, 234 |
| Conread position: | 533-855 |
| Cow position: | chr5:76099070-76098729 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 14, 279 |
| Conread position: | 534-855 |
| Cow position: | chr5:54336867-54337203 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 535-852 |
| Cow position: | chr5:46796899-46797198 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 224, 11 |
| Conread position: | 535-852 |
| Cow position: | chr5:75755547-75755870 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 170 |
| Conread position: | 535-855 |
| Cow position: | chr5:4754170-4753832 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 275 |
| Conread position: | 536-855 |
| Cow position: | chr5:12212497-12212834 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 545-852 |
| Cow position: | chr5:66337850-66338149 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 128, 73 |
| Conread position: | 551-855 |
| Cow position: | chr5:12337253-12337575 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 560-855 |
| Cow position: | chr5:1395459-1395161 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 560-856 |
| Cow position: | chr5:31133760-31133467 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 564-852 |
| Cow position: | chr5:34559153-34559443 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 580-852 |
| Cow position: | chr5:7141078-7140802 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 7 |
| Conread position: | 582-852 |
| Cow position: | chr5:15723293-15723017 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 109, 223 |
| Conread position: | 582-852 |
| Cow position: | chr5:16085786-16085512 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 53 |
| Conread position: | 582-852 |
| Cow position: | chr5:32697779-32697494 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 91, 163 |
| Conread position: | 582-852 |
| Cow position: | chr5:35207265-35207540 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 222 |
| Conread position: | 582-855 |
| Cow position: | chr5:445502-445780 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 582-855 |
| Cow position: | chr5:4683477-4683200 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 109, 214 |
| Conread position: | 582-855 |
| Cow position: | chr5:24088029-24087749 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 582-855 |
| Cow position: | chr5:27196037-27195761 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 118, 51 |
| Conread position: | 582-855 |
| Cow position: | chr5:39362895-39363173 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 582-855 |
| Cow position: | chr5:41586297-41586575 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 582-855 |
| Cow position: | chr5:44275624-44275896 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 582-855 |
| Cow position: | chr5:55722552-55722830 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 224 |
| Conread position: | 582-856 |
| Cow position: | chr5:6694557-6694836 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 582-856 |
| Cow position: | chr5:24221020-24221297 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 582-857 |
| Cow position: | chr5:43991305-43991585 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 103 |
| Conread position: | 586-842 |
| Cow position: | chr5:59782733-59782469 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 7 |
| Conread position: | 589-852 |
| Cow position: | chr5:41523969-41523697 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 173 |
| Conread position: | 590-852 |
| Cow position: | chr5:1105841-1105580 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 171, 111 |
| Conread position: | 594-852 |
| Cow position: | chr5:14551566-14551303 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 594-855 |
| Cow position: | chr5:75755082-75754823 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 595-849 |
| Cow position: | chr5:40928984-40928731 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 595-852 |
| Cow position: | chr5:4165667-4165925 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 74, 160 |
| Conread position: | 595-855 |
| Cow position: | chr5:7175334-7175599 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 597-835 |
| Cow position: | chr5:6044040-6044279 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 74, 96 |
| Conread position: | 597-852 |
| Cow position: | chr5:34527615-34527864 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 18 |
| Conread position: | 603-852 |
| Cow position: | chr5:58353262-58353503 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 606-851 |
| Cow position: | chr5:60446480-60446729 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 100, 52 |
| Conread position: | 606-855 |
| Cow position: | chr5:43437895-43437641 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 607-852 |
| Cow position: | chr5:45941939-45941700 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 152, 15 |
| Conread position: | 610-848 |
| Cow position: | chr5:15362095-15362332 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 193 |
| Conread position: | 615-855 |
| Cow position: | chr5:28012913-28013158 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 615-857 |
| Cow position: | chr5:55087909-55088157 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 621-852 |
| Cow position: | chr5:6671107-6670880 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 73, 134 |
| Conread position: | 628-855 |
| Cow position: | chr5:280110-279879 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 640-855 |
| Cow position: | chr5:43984165-43984385 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 641-852 |
| Cow position: | chr5:7042324-7042539 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 170 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 58, 126 |
| Conread position: | 642-855 |
| Cow position: | chr5:53185418-53185202 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 652-852 |
| Cow position: | chr5:6219037-6219242 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 652-855 |
| Cow position: | chr5:67813955-67814163 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 660-855 |
| Cow position: | chr5:58900943-58900743 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 664-851 |
| Cow position: | chr5:14558353-14558161 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 664-852 |
| Cow position: | chr5:59268522-59268708 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 666-855 |
| Cow position: | chr5:6060524-6060330 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 666-855 |
| Cow position: | chr5:29968715-29968909 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 667-852 |
| Cow position: | chr5:52041375-52041191 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 668-850 |
| Cow position: | chr5:17426041-17425854 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 120 |
| Conread position: | 669-852 |
| Cow position: | chr5:37384425-37384237 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 135 |
| Conread position: | 670-851 |
| Cow position: | chr5:39749331-39749145 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 674-855 |
| Cow position: | chr5:59146723-59146909 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 675-844 |
| Cow position: | chr5:6840061-6839899 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 684-843 |
| Cow position: | chr5:66256763-66256921 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 75, 7 |
| Conread position: | 684-851 |
| Cow position: | chr5:39936229-39936396 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 684-852 |
| Cow position: | chr5:5787201-5787032 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 110 |
| Conread position: | 684-852 |
| Cow position: | chr5:50599188-50599355 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 120, 99 |
| Conread position: | 687-849 |
| Cow position: | chr5:12872578-12872741 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 691-842 |
| Cow position: | chr5:41608372-41608522 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 113, 71 |
| Conread position: | 693-852 |
| Cow position: | chr5:27063101-27062941 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 69, 112 |
| Conread position: | 695-852 |
| Cow position: | chr5:36724584-36724430 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 695-852 |
| Cow position: | chr5:40828239-40828082 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 695-855 |
| Cow position: | chr5:411579-411418 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 696-852 |
| Cow position: | chr5:72007752-72007595 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 104 |
| Conread position: | 704-852 |
| Cow position: | chr5:25496260-25496111 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 704-852 |
| Cow position: | chr5:54454645-54454793 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 104 |
| Conread position: | 704-855 |
| Cow position: | chr5:39216404-39216556 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 704-855 |
| Cow position: | chr5:68273700-68273548 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 705-852 |
| Cow position: | chr5:39448396-39448249 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 65 |
| Conread position: | 707-851 |
| Cow position: | chr5:31217244-31217390 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 710-852 |
| Cow position: | chr5:52646185-52646042 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 53, 90 |
| Conread position: | 710-852 |
| Cow position: | chr5:54868371-54868514 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 713-852 |
| Cow position: | chr5:32081390-32081250 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 86 |
Show alignments to all cow chromosomes.