Cow genome map


           Conread name:
           Tra1-TCH01E110088
        

               Conread position:
               49-260
               

               Cow position:
               chr13:18093354-18093141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               52-313
               

               Cow position:
               chr13:57807809-57807562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 47
               

               Conread position:
               61-259
               

               Cow position:
               chr13:56667247-56667053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               62-396
               

               Cow position:
               chr13:56922211-56921875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               63-390
               

               Cow position:
               chr13:15427146-15427457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               264, 7
               

               Conread position:
               66-348
               

               Cow position:
               chr13:23672161-23671880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               97, 76
               

               Conread position:
               69-276
               

               Cow position:
               chr13:12976809-12977016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               76-549
               

               Cow position:
               chr13:37378202-37378662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               328
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               226, 58
               

               Conread position:
               103-323
               

               Cow position:
               chr13:56600770-56600562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               216, 56
               

               Conread position:
               312-556
               

               Cow position:
               chr13:29045543-29045294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 59
               

               Conread position:
               314-583
               

               Cow position:
               chr13:56735254-56734972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 161
               
Show alignments to all cow chromosomes.