Cow genome map


           Conread name:
           Tra1-TCH01E120085
        

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               135, 38
               

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               261, 0
               

               Conread position:
               1-529
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               329
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               109, 117
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-615
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               353
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               1-663
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-780
               

               Cow position:
               
               

               Alignm length:
               793
               

               Alignm identity:
               466
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               1-791
               

               Cow position:
               
               

               Alignm length:
               793
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               628, 640
               

               Conread position:
               1-791
               

               Cow position:
               
               

               Alignm length:
               793
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               528, 535
               

               Conread position:
               2-289
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               230, 150
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 350
               

               Conread position:
               3-543
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 233
               

               Conread position:
               7-746
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               383, 370
               

               Conread position:
               8-804
               

               Cow position:
               
               

               Alignm length:
               813
               

               Alignm identity:
               487
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               127, 170
               

               Conread position:
               19-598
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               356
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               91, 99
               

               Conread position:
               52-588
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               520, 0
               

               Conread position:
               57-573
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               57-603
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               320
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               5, 86
               

               Conread position:
               70-791
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               701, 706
               

               Conread position:
               92-706
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               373
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               95, 207
               

               Conread position:
               133-793
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               396
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               180, 175
               

               Conread position:
               167-791
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               374
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               69, 76
               

               Conread position:
               177-618
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               387, 115
               

               Conread position:
               228-596
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               320, 0
               
Show alignments to all cow chromosomes.