Cow genome map
| Conread name: | Tra1-TCH01E120085 |
| Conread position: | 1-246 |
| Cow position: | chr13:39984658-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-370 |
| Cow position: | chr13:56292193-56291826 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 135, 38 |
| Conread position: | 1-460 |
| Cow position: | chr13:56333802-56334270 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 1-529 |
| Cow position: | chr13:39930650-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 329 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 109, 117 |
| Conread position: | 1-573 |
| Cow position: | chr13:39984322-39984894 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-615 |
| Cow position: | chr13:22125015-22125629 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 353 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 1-663 |
| Cow position: | chr13:39984238-39984900 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-780 |
| Cow position: | chr13:56292611-56291836 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 466 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 1-791 |
| Cow position: | chr13:39983986-39984776 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 628, 640 |
| Conread position: | 1-791 |
| Cow position: | chr13:39984070-39984860 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 528, 535 |
| Conread position: | 2-289 |
| Cow position: | chr13:56317512-56317797 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 230, 150 |
| Conread position: | 3-373 |
| Cow position: | chr13:56333972-56334349 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 350 |
| Conread position: | 3-543 |
| Cow position: | chr13:56333720-56334269 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 233 |
| Conread position: | 7-746 |
| Cow position: | chr13:39984160-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 370 |
| Conread position: | 8-804 |
| Cow position: | chr13:56292688-56291898 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 487 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 127, 170 |
| Conread position: | 19-598 |
| Cow position: | chr13:39930584-39931161 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 356 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 91, 99 |
| Conread position: | 52-588 |
| Cow position: | chr13:56333517-56334055 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 520, 0 |
| Conread position: | 57-573 |
| Cow position: | chr13:56292297-56291791 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 68 |
| Conread position: | 57-603 |
| Cow position: | chr13:24162460-24163007 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 320 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 70-791 |
| Cow position: | chr13:39983887-39984608 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 701, 706 |
| Conread position: | 92-706 |
| Cow position: | chr13:56292436-56291826 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 373 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 207 |
| Conread position: | 133-793 |
| Cow position: | chr13:56333514-56334183 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 396 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 180, 175 |
| Conread position: | 167-791 |
| Cow position: | chr13:39983816-39984440 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 374 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 177-618 |
| Cow position: | chr13:56317357-56317788 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 387, 115 |
| Conread position: | 228-596 |
| Cow position: | chr13:56317929-56318303 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 320, 0 |
Show alignments to all cow chromosomes.