Cow genome map

Conread name: Tra1-TCH01E120085

Conread position: 1-318
Cow position:
Alignm length: 318
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-365
Cow position:
Alignm length: 367
Alignm identity: 236
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 36, 43

Conread position: 1-376
Cow position:
Alignm length: 376
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-424
Cow position:
Alignm length: 426
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 44

Conread position: 1-427
Cow position:
Alignm length: 428
Alignm identity: 257
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 144

Conread position: 1-496
Cow position:
Alignm length: 498
Alignm identity: 309
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 289, 302

Conread position: 1-500
Cow position:
Alignm length: 502
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 308

Conread position: 1-503
Cow position:
Alignm length: 505
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 144

Conread position: 1-505
Cow position:
Alignm length: 506
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 126

Conread position: 1-528
Cow position:
Alignm length: 531
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 293

Conread position: 1-538
Cow position:
Alignm length: 543
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 299

Conread position: 1-541
Cow position:
Alignm length: 542
Alignm identity: 326
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 375, 388

Conread position: 1-542
Cow position:
Alignm length: 543
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 144

Conread position: 1-552
Cow position:
Alignm length: 553
Alignm identity: 334
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 192, 219

Conread position: 1-587
Cow position:
Alignm length: 587
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-587
Cow position:
Alignm length: 593
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 138

Conread position: 1-588
Cow position:
Alignm length: 588
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-597
Cow position:
Alignm length: 600
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 307

Conread position: 1-668
Cow position:
Alignm length: 674
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 30

Conread position: 1-668
Cow position:
Alignm length: 669
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 125

Conread position: 1-705
Cow position:
Alignm length: 706
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 477

Conread position: 1-709
Cow position:
Alignm length: 713
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 40

Conread position: 1-726
Cow position:
Alignm length: 729
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 292

Conread position: 1-748
Cow position:
Alignm length: 750
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 624, 507

Conread position: 1-757
Cow position:
Alignm length: 763
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 141

Conread position: 1-760
Cow position:
Alignm length: 762
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 139

Conread position: 1-765
Cow position:
Alignm length: 769
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 124

Conread position: 1-767
Cow position:
Alignm length: 775
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 65

Conread position: 1-767
Cow position:
Alignm length: 776
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 1-768
Cow position:
Alignm length: 773
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 141

Conread position: 1-783
Cow position:
Alignm length: 789
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 141

Conread position: 1-788
Cow position:
Alignm length: 795
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 61

Conread position: 1-791
Cow position:
Alignm length: 796
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 139

Conread position: 1-791
Cow position:
Alignm length: 791
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-791
Cow position:
Alignm length: 791
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-791
Cow position:
Alignm length: 791
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-791
Cow position:
Alignm length: 795
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 103

Conread position: 1-791
Cow position:
Alignm length: 792
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 82

Conread position: 1-791
Cow position:
Alignm length: 795
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 57

Conread position: 1-791
Cow position:
Alignm length: 793
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 124

Conread position: 1-791
Cow position:
Alignm length: 793
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 306

Conread position: 1-791
Cow position:
Alignm length: 797
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 92

Conread position: 1-791
Cow position:
Alignm length: 797
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 145

Conread position: 1-791
Cow position:
Alignm length: 794
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 52

Conread position: 1-791
Cow position:
Alignm length: 797
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 130

Conread position: 1-793
Cow position:
Alignm length: 794
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 471, 459

Conread position: 1-793
Cow position:
Alignm length: 793
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-793
Cow position:
Alignm length: 796
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 649, 632

Conread position: 1-793
Cow position:
Alignm length: 800
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 126

Conread position: 1-799
Cow position:
Alignm length: 800
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 306

Conread position: 1-799
Cow position:
Alignm length: 803
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 145

Conread position: 1-799
Cow position:
Alignm length: 806
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 54

Conread position: 1-850
Cow position:
Alignm length: 858
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 794, 0

Conread position: 1-856
Cow position:
Alignm length: 866
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 641, 635

Conread position: 1-865
Cow position:
Alignm length: 875
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 792, 0

Conread position: 1-872
Cow position:
Alignm length: 872
Alignm identity: 762
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-886
Cow position:
Alignm length: 899
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 641, 637

Conread position: 1-887
Cow position:
Alignm length: 899
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 794, 0

Conread position: 1-888
Cow position:
Alignm length: 902
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 133

Conread position: 2-621
Cow position:
Alignm length: 621
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 3-783
Cow position:
Alignm length: 785
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 143

Conread position: 3-791
Cow position:
Alignm length: 792
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 38

Conread position: 4-541
Cow position:
Alignm length: 540
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 298

Conread position: 4-680
Cow position:
Alignm length: 681
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 121

Conread position: 4-747
Cow position:
Alignm length: 746
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 49

Conread position: 4-787
Cow position:
Alignm length: 788
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 371, 386

Conread position: 4-791
Cow position:
Alignm length: 790
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 686, 170

Conread position: 5-793
Cow position:
Alignm length: 794
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 42

Conread position: 5-799
Cow position:
Alignm length: 803
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 141

Conread position: 7-791
Cow position:
Alignm length: 788
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 117

Conread position: 7-794
Cow position:
Alignm length: 790
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 294

Conread position: 9-792
Cow position:
Alignm length: 785
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 627, 641

Conread position: 11-791
Cow position:
Alignm length: 784
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 42

Conread position: 12-591
Cow position:
Alignm length: 580
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-791
Cow position:
Alignm length: 781
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 637, 632

Conread position: 12-792
Cow position:
Alignm length: 784
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 395

Conread position: 13-588
Cow position:
Alignm length: 579
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 45

Conread position: 13-783
Cow position:
Alignm length: 773
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 469

Conread position: 13-791
Cow position:
Alignm length: 779
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-792
Cow position:
Alignm length: 781
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 296

Conread position: 18-791
Cow position:
Alignm length: 776
Alignm identity: 448
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 273, 280

Conread position: 19-338
Cow position:
Alignm length: 320
Alignm identity: 204
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 19-791
Cow position:
Alignm length: 775
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 93

Conread position: 19-792
Cow position:
Alignm length: 779
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 254

Conread position: 22-707
Cow position:
Alignm length: 692
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 118

Conread position: 22-791
Cow position:
Alignm length: 773
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 119

Conread position: 22-794
Cow position:
Alignm length: 776
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 287

Conread position: 46-791
Cow position:
Alignm length: 750
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 49

Conread position: 49-675
Cow position:
Alignm length: 628
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 411

Conread position: 53-793
Cow position:
Alignm length: 743
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 70

Conread position: 56-566
Cow position:
Alignm length: 513
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 243

Conread position: 57-865
Cow position:
Alignm length: 821
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 163

Conread position: 58-791
Cow position:
Alignm length: 737
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 78

Conread position: 61-791
Cow position:
Alignm length: 738
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 85

Conread position: 61-850
Cow position:
Alignm length: 798
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 734, 0

Conread position: 66-792
Cow position:
Alignm length: 729
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 63

Conread position: 69-794
Cow position:
Alignm length: 727
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 276

Conread position: 71-791
Cow position:
Alignm length: 726
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 55

Conread position: 73-613
Cow position:
Alignm length: 542
Alignm identity: 328
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 387, 47

Conread position: 73-791
Cow position:
Alignm length: 722
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 133

Conread position: 76-707
Cow position:
Alignm length: 637
Alignm identity: 383
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 65

Conread position: 79-668
Cow position:
Alignm length: 591
Alignm identity: 348
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 585, 0

Conread position: 79-764
Cow position:
Alignm length: 689
Alignm identity: 407
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 218, 213

Conread position: 82-791
Cow position:
Alignm length: 712
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 565

Conread position: 130-869
Cow position:
Alignm length: 753
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 10

Conread position: 141-712
Cow position:
Alignm length: 575
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 10

Conread position: 145-887
Cow position:
Alignm length: 756
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 22

Conread position: 155-403
Cow position:
Alignm length: 249
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 162-791
Cow position:
Alignm length: 632
Alignm identity: 360
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 219, 215

Conread position: 185-707
Cow position:
Alignm length: 523
Alignm identity: 303
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 190-764
Cow position:
Alignm length: 576
Alignm identity: 344
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 272, 286

Conread position: 228-787
Cow position:
Alignm length: 561
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 102

Conread position: 233-888
Cow position:
Alignm length: 672
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 144

Conread position: 235-511
Cow position:
Alignm length: 278
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 103

Conread position: 237-787
Cow position:
Alignm length: 554
Alignm identity: 337
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 235, 52

Conread position: 241-797
Cow position:
Alignm length: 562
Alignm identity: 338
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 61, 69

Conread position: 264-792
Cow position:
Alignm length: 530
Alignm identity: 305
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 422, 417

Conread position: 274-794
Cow position:
Alignm length: 524
Alignm identity: 320
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 33

Conread position: 304-725
Cow position:
Alignm length: 424
Alignm identity: 254
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 15

Conread position: 312-886
Cow position:
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 0

Conread position: 314-793
Cow position:
Alignm length: 486
Alignm identity: 295
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 168, 163

Conread position: 325-799
Cow position:
Alignm length: 480
Alignm identity: 298
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 52

Conread position: 387-888
Cow position:
Alignm length: 514
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 411, 0

Conread position: 412-710
Cow position:
Alignm length: 300
Alignm identity: 185
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 65

Show alignments to all cow chromosomes.