Cow genome map

Conread name: Tra1-TCH01E120085

Conread position: 1-364
Cow position:
Alignm length: 366
Alignm identity: 237
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 61

Conread position: 1-530
Cow position:
Alignm length: 531
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 1-540
Cow position:
Alignm length: 544
Alignm identity: 322
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 78

Conread position: 1-540
Cow position:
Alignm length: 542
Alignm identity: 323
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 232, 239

Conread position: 1-593
Cow position:
Alignm length: 596
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 47

Conread position: 1-602
Cow position:
Alignm length: 604
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 304

Conread position: 1-606
Cow position:
Alignm length: 606
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-624
Cow position:
Alignm length: 626
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 135

Conread position: 1-665
Cow position:
Alignm length: 669
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 61

Conread position: 1-707
Cow position:
Alignm length: 714
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 236

Conread position: 1-755
Cow position:
Alignm length: 762
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 30

Conread position: 1-770
Cow position:
Alignm length: 770
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-791
Cow position:
Alignm length: 794
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 382

Conread position: 1-791
Cow position:
Alignm length: 796
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 46

Conread position: 1-791
Cow position:
Alignm length: 797
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 38

Conread position: 1-791
Cow position:
Alignm length: 795
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 140

Conread position: 1-792
Cow position:
Alignm length: 797
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 46

Conread position: 1-792
Cow position:
Alignm length: 796
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 301

Conread position: 1-793
Cow position:
Alignm length: 799
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 123

Conread position: 1-804
Cow position:
Alignm length: 804
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 793, 0

Conread position: 2-700
Cow position:
Alignm length: 701
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 541

Conread position: 3-790
Cow position:
Alignm length: 791
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 25

Conread position: 3-799
Cow position:
Alignm length: 801
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 652, 618

Conread position: 4-545
Cow position:
Alignm length: 542
Alignm identity: 309
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-791
Cow position:
Alignm length: 789
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 57

Conread position: 5-792
Cow position:
Alignm length: 790
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 21

Conread position: 8-668
Cow position:
Alignm length: 663
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 460, 464

Conread position: 13-628
Cow position:
Alignm length: 619
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 300

Conread position: 19-540
Cow position:
Alignm length: 524
Alignm identity: 318
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 149, 144

Conread position: 19-719
Cow position:
Alignm length: 703
Alignm identity: 398
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 270, 280

Conread position: 22-506
Cow position:
Alignm length: 486
Alignm identity: 290
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 460, 454

Conread position: 27-512
Cow position:
Alignm length: 487
Alignm identity: 279
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 286, 282

Conread position: 32-782
Cow position:
Alignm length: 753
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 335

Conread position: 52-793
Cow position:
Alignm length: 742
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 56-708
Cow position:
Alignm length: 656
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 418, 405

Conread position: 60-595
Cow position:
Alignm length: 537
Alignm identity: 312
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 253, 249

Conread position: 61-791
Cow position:
Alignm length: 735
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 80

Conread position: 62-792
Cow position:
Alignm length: 735
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 240

Conread position: 73-680
Cow position:
Alignm length: 609
Alignm identity: 341
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 227, 232

Conread position: 73-707
Cow position:
Alignm length: 636
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 409

Conread position: 78-791
Cow position:
Alignm length: 717
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 32

Conread position: 82-719
Cow position:
Alignm length: 644
Alignm identity: 369
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 294, 313

Conread position: 103-791
Cow position:
Alignm length: 691
Alignm identity: 384
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 598, 578

Conread position: 135-798
Cow position:
Alignm length: 664
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 143-792
Cow position:
Alignm length: 654
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 330, 317

Conread position: 200-791
Cow position:
Alignm length: 592
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 241-794
Cow position:
Alignm length: 554
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 246-793
Cow position:
Alignm length: 551
Alignm identity: 334
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 6, 25

Conread position: 392-804
Cow position:
Alignm length: 415
Alignm identity: 252
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 298, 290

Show alignments to all cow chromosomes.