Cow genome map
| Conread name: | Tra1-TCH01E120085 |
| Conread position: | 1-418 |
| Cow position: | chr19:23650064-23650481 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 276, 302 |
| Conread position: | 1-454 |
| Cow position: | chr19:14948460-14948008 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 284 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-515 |
| Cow position: | chr19:20635459-20634947 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 1-543 |
| Cow position: | chr19:14960301-14959763 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 1-557 |
| Cow position: | chr19:43570218-43569666 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 139 |
| Conread position: | 1-572 |
| Cow position: | chr19:23597203-23597774 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 451, 471 |
| Conread position: | 1-591 |
| Cow position: | chr19:14959395-14958820 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 360 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 561, 90 |
| Conread position: | 1-598 |
| Cow position: | chr19:23649812-23650409 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 132 |
| Conread position: | 1-603 |
| Cow position: | chr19:14960385-14959787 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 480, 236 |
| Conread position: | 1-607 |
| Cow position: | chr19:23614530-23615134 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 574, 0 |
| Conread position: | 1-611 |
| Cow position: | chr19:20635627-20635017 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 303 |
| Conread position: | 1-663 |
| Cow position: | chr19:23614446-23615108 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 301 |
| Conread position: | 1-742 |
| Cow position: | chr19:23614362-23615103 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 47 |
| Conread position: | 1-748 |
| Cow position: | chr19:14959563-14958831 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 624, 255 |
| Conread position: | 1-748 |
| Cow position: | chr19:23649644-23650391 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 199 |
| Conread position: | 1-748 |
| Cow position: | chr19:43570376-43569643 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 92 |
| Conread position: | 1-751 |
| Cow position: | chr19:14940330-14941080 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 220 |
| Conread position: | 1-769 |
| Cow position: | chr19:23649560-23650328 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 1-791 |
| Cow position: | chr19:14959646-14958872 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 12 |
| Conread position: | 1-791 |
| Cow position: | chr19:20677453-20678243 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 127 |
| Conread position: | 1-791 |
| Cow position: | chr19:20677789-20678579 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 407 |
| Conread position: | 1-791 |
| Cow position: | chr19:23613522-23614312 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 1-791 |
| Cow position: | chr19:23613690-23614480 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 300 |
| Conread position: | 1-791 |
| Cow position: | chr19:23614026-23614816 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 374, 383 |
| Conread position: | 1-791 |
| Cow position: | chr19:23614194-23614984 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 272 |
| Conread position: | 1-791 |
| Cow position: | chr19:23649308-23650098 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 135 |
| Conread position: | 1-792 |
| Cow position: | chr19:14940078-14940869 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 635, 644 |
| Conread position: | 1-792 |
| Cow position: | chr19:14940162-14940952 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 481, 474 |
| Conread position: | 1-792 |
| Cow position: | chr19:23613858-23614648 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 781, 0 |
| Conread position: | 1-793 |
| Cow position: | chr19:20677957-20678746 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 1-793 |
| Cow position: | chr19:23596870-23597659 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 163 |
| Conread position: | 1-793 |
| Cow position: | chr19:23613606-23614398 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 298 |
| Conread position: | 1-793 |
| Cow position: | chr19:23613942-23614734 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 300 |
| Conread position: | 1-793 |
| Cow position: | chr19:23614278-23615070 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 1-794 |
| Cow position: | chr19:20677537-20678330 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 1-794 |
| Cow position: | chr19:23613354-23614147 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 641, 631 |
| Conread position: | 1-794 |
| Cow position: | chr19:23613438-23614231 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 136 |
| Conread position: | 1-794 |
| Cow position: | chr19:23614110-23614903 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 128 |
| Conread position: | 1-794 |
| Cow position: | chr19:23649476-23650269 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 1-798 |
| Cow position: | chr19:14960135-14959354 (view UCSC Genome Browser custom track) |
| Alignm length: | 801 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 295 |
| Conread position: | 1-800 |
| Cow position: | chr19:14939993-14940793 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 293 |
| Conread position: | 1-808 |
| Cow position: | chr19:20677873-20678680 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 123 |
| Conread position: | 3-595 |
| Cow position: | chr19:23597121-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 134 |
| Conread position: | 3-779 |
| Cow position: | chr19:14940248-14941024 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 479, 472 |
| Conread position: | 5-507 |
| Cow position: | chr19:23649984-23650486 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 300 |
| Conread position: | 5-791 |
| Cow position: | chr19:20677373-20678159 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 232 |
| Conread position: | 7-793 |
| Cow position: | chr19:23649398-23650184 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 298 |
| Conread position: | 10-794 |
| Cow position: | chr19:20677630-20678414 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 127 |
| Conread position: | 13-578 |
| Cow position: | chr19:23649908-23650473 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 207 |
| Conread position: | 13-668 |
| Cow position: | chr19:20635699-20635044 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 22-590 |
| Cow position: | chr19:14959862-14959310 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 356 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 124, 49 |
| Conread position: | 61-566 |
| Cow position: | chr19:14948484-14947979 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 310 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 421, 80 |
| Conread position: | 61-657 |
| Cow position: | chr19:14960409-14959815 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 564, 260 |
| Conread position: | 61-677 |
| Cow position: | chr19:23597095-23597711 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 559, 579 |
| Conread position: | 65-794 |
| Cow position: | chr19:23596850-23597576 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 183 |
| Conread position: | 79-793 |
| Cow position: | chr19:14939988-14940702 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 654, 642 |
| Conread position: | 82-791 |
| Cow position: | chr19:23613351-23614060 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 83-819 |
| Cow position: | chr19:20636031-20635314 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 430 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 344, 176 |
| Conread position: | 99-790 |
| Cow position: | chr19:23613284-23613975 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 198 |
| Conread position: | 103-802 |
| Cow position: | chr19:14959711-14959031 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 426 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 190, 60 |
| Conread position: | 139-801 |
| Cow position: | chr19:14960415-14959758 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 533, 262 |
| Conread position: | 145-587 |
| Cow position: | chr19:14948484-14948043 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 146-793 |
| Cow position: | chr19:43570398-43569762 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 5 |
| Conread position: | 150-791 |
| Cow position: | chr19:23649289-23649930 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 154 |
| Conread position: | 157-681 |
| Cow position: | chr19:20635639-20635115 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 213 |
| Conread position: | 325-793 |
| Cow position: | chr19:14915956-14916420 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 325-793 |
| Cow position: | chr19:20635639-20635171 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 325 |
| Conread position: | 397-797 |
| Cow position: | chr19:14948484-14948085 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 415-791 |
| Cow position: | chr19:14960475-14960101 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 324, 0 |
Show alignments to all cow chromosomes.