Cow genome map

Conread name: Tra1-TCH01E120085

Conread position: 1-418
Cow position:
Alignm length: 419
Alignm identity: 260
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 276, 302

Conread position: 1-454
Cow position:
Alignm length: 454
Alignm identity: 284
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 60, 0

Conread position: 1-515
Cow position:
Alignm length: 521
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 1-543
Cow position:
Alignm length: 543
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 1-557
Cow position:
Alignm length: 558
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 139

Conread position: 1-572
Cow position:
Alignm length: 575
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 451, 471

Conread position: 1-591
Cow position:
Alignm length: 592
Alignm identity: 360
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 561, 90

Conread position: 1-598
Cow position:
Alignm length: 600
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 132

Conread position: 1-603
Cow position:
Alignm length: 605
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 480, 236

Conread position: 1-607
Cow position:
Alignm length: 607
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 574, 0

Conread position: 1-611
Cow position:
Alignm length: 612
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 303

Conread position: 1-663
Cow position:
Alignm length: 665
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 301

Conread position: 1-742
Cow position:
Alignm length: 746
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 47

Conread position: 1-748
Cow position:
Alignm length: 750
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 624, 255

Conread position: 1-748
Cow position:
Alignm length: 750
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 199

Conread position: 1-748
Cow position:
Alignm length: 751
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 92

Conread position: 1-751
Cow position:
Alignm length: 752
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 220

Conread position: 1-769
Cow position:
Alignm length: 775
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 61

Conread position: 1-791
Cow position:
Alignm length: 794
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 12

Conread position: 1-791
Cow position:
Alignm length: 794
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 127

Conread position: 1-791
Cow position:
Alignm length: 796
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 407

Conread position: 1-791
Cow position:
Alignm length: 794
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 31

Conread position: 1-791
Cow position:
Alignm length: 794
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 300

Conread position: 1-791
Cow position:
Alignm length: 793
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 383

Conread position: 1-791
Cow position:
Alignm length: 793
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 272

Conread position: 1-791
Cow position:
Alignm length: 797
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 135

Conread position: 1-792
Cow position:
Alignm length: 793
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 635, 644

Conread position: 1-792
Cow position:
Alignm length: 793
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 474

Conread position: 1-792
Cow position:
Alignm length: 792
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 781, 0

Conread position: 1-793
Cow position:
Alignm length: 798
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 48

Conread position: 1-793
Cow position:
Alignm length: 794
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 163

Conread position: 1-793
Cow position:
Alignm length: 795
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 298

Conread position: 1-793
Cow position:
Alignm length: 797
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 300

Conread position: 1-793
Cow position:
Alignm length: 796
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 1-794
Cow position:
Alignm length: 799
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 61

Conread position: 1-794
Cow position:
Alignm length: 795
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 641, 631

Conread position: 1-794
Cow position:
Alignm length: 795
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 136

Conread position: 1-794
Cow position:
Alignm length: 798
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 128

Conread position: 1-794
Cow position:
Alignm length: 798
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 61

Conread position: 1-798
Cow position:
Alignm length: 801
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 295

Conread position: 1-800
Cow position:
Alignm length: 805
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 293

Conread position: 1-808
Cow position:
Alignm length: 812
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 3-595
Cow position:
Alignm length: 594
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 134

Conread position: 3-779
Cow position:
Alignm length: 778
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 472

Conread position: 5-507
Cow position:
Alignm length: 504
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 300

Conread position: 5-791
Cow position:
Alignm length: 795
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 232

Conread position: 7-793
Cow position:
Alignm length: 791
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 298

Conread position: 10-794
Cow position:
Alignm length: 791
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 127

Conread position: 13-578
Cow position:
Alignm length: 570
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 207

Conread position: 13-668
Cow position:
Alignm length: 661
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 18

Conread position: 22-590
Cow position:
Alignm length: 571
Alignm identity: 356
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 124, 49

Conread position: 61-566
Cow position:
Alignm length: 508
Alignm identity: 310
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 421, 80

Conread position: 61-657
Cow position:
Alignm length: 598
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 564, 260

Conread position: 61-677
Cow position:
Alignm length: 618
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 559, 579

Conread position: 65-794
Cow position:
Alignm length: 733
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 183

Conread position: 79-793
Cow position:
Alignm length: 716
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 654, 642

Conread position: 82-791
Cow position:
Alignm length: 713
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 83-819
Cow position:
Alignm length: 740
Alignm identity: 430
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 344, 176

Conread position: 99-790
Cow position:
Alignm length: 695
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 198

Conread position: 103-802
Cow position:
Alignm length: 703
Alignm identity: 426
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 190, 60

Conread position: 139-801
Cow position:
Alignm length: 665
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 533, 262

Conread position: 145-587
Cow position:
Alignm length: 443
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 146-793
Cow position:
Alignm length: 649
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 5

Conread position: 150-791
Cow position:
Alignm length: 645
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 154

Conread position: 157-681
Cow position:
Alignm length: 528
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 213

Conread position: 325-793
Cow position:
Alignm length: 473
Alignm identity: 282
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 12

Conread position: 325-793
Cow position:
Alignm length: 470
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 325

Conread position: 397-797
Cow position:
Alignm length: 401
Alignm identity: 241
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 415-791
Cow position:
Alignm length: 377
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 324, 0

Show alignments to all cow chromosomes.