Cow genome map

Conread name: Tra1-TCH01E120085

Conread position: 1-189
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 43

Conread position: 1-265
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 30

Conread position: 1-330
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 40

Conread position: 1-418
Cow position:
Alignm length: 419
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 1-421
Cow position:
Alignm length: 423
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 298

Conread position: 1-440
Cow position:
Alignm length: 442
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 1-460
Cow position:
Alignm length: 461
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 44

Conread position: 1-495
Cow position:
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 30

Conread position: 1-495
Cow position:
Alignm length: 499
Alignm identity: 314
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 245, 258

Conread position: 1-510
Cow position:
Alignm length: 514
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 1-541
Cow position:
Alignm length: 543
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 304

Conread position: 1-578
Cow position:
Alignm length: 582
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 133

Conread position: 1-593
Cow position:
Alignm length: 593
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-595
Cow position:
Alignm length: 596
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 474

Conread position: 1-597
Cow position:
Alignm length: 600
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 328

Conread position: 1-618
Cow position:
Alignm length: 622
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 24

Conread position: 1-677
Cow position:
Alignm length: 678
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 624, 631

Conread position: 1-738
Cow position:
Alignm length: 740
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 235

Conread position: 1-742
Cow position:
Alignm length: 747
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 628, 637

Conread position: 1-791
Cow position:
Alignm length: 796
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 27

Conread position: 1-793
Cow position:
Alignm length: 798
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 46

Conread position: 3-357
Cow position:
Alignm length: 355
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 0

Conread position: 4-791
Cow position:
Alignm length: 793
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 138

Conread position: 5-440
Cow position:
Alignm length: 438
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 287

Conread position: 5-776
Cow position:
Alignm length: 778
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 29

Conread position: 6-344
Cow position:
Alignm length: 339
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 8-570
Cow position:
Alignm length: 568
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 121

Conread position: 8-578
Cow position:
Alignm length: 573
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 50

Conread position: 8-786
Cow position:
Alignm length: 782
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 138

Conread position: 11-543
Cow position:
Alignm length: 533
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-604
Cow position:
Alignm length: 596
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 135

Conread position: 11-791
Cow position:
Alignm length: 785
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 159

Conread position: 13-792
Cow position:
Alignm length: 783
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 19-410
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 121

Conread position: 19-662
Cow position:
Alignm length: 646
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 358

Conread position: 61-618
Cow position:
Alignm length: 564
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 80

Conread position: 76-525
Cow position:
Alignm length: 451
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 304

Conread position: 76-670
Cow position:
Alignm length: 597
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 240

Conread position: 82-726
Cow position:
Alignm length: 649
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 24

Conread position: 88-410
Cow position:
Alignm length: 326
Alignm identity: 213
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 38, 52

Conread position: 90-413
Cow position:
Alignm length: 324
Alignm identity: 211
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 92-819
Cow position:
Alignm length: 730
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 275

Conread position: 95-662
Cow position:
Alignm length: 571
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 204

Conread position: 103-511
Cow position:
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 360

Conread position: 103-752
Cow position:
Alignm length: 655
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 199

Conread position: 140-794
Cow position:
Alignm length: 658
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 243

Conread position: 145-741
Cow position:
Alignm length: 603
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 65

Conread position: 152-798
Cow position:
Alignm length: 648
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 7

Conread position: 157-791
Cow position:
Alignm length: 635
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 159-607
Cow position:
Alignm length: 451
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 206

Conread position: 159-765
Cow position:
Alignm length: 609
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 146

Conread position: 179-508
Cow position:
Alignm length: 331
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 188

Conread position: 180-791
Cow position:
Alignm length: 616
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 187

Conread position: 181-749
Cow position:
Alignm length: 570
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 438

Conread position: 187-578
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 215-692
Cow position:
Alignm length: 478
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 0

Conread position: 251-580
Cow position:
Alignm length: 332
Alignm identity: 222
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 6, 112

Conread position: 260-794
Cow position:
Alignm length: 537
Alignm identity: 325
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 369, 383

Conread position: 271-662
Cow position:
Alignm length: 393
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 378

Conread position: 308-791
Cow position:
Alignm length: 488
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 274, 279

Conread position: 327-761
Cow position:
Alignm length: 437
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 292

Conread position: 337-793
Cow position:
Alignm length: 460
Alignm identity: 279
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 86, 24

Conread position: 347-791
Cow position:
Alignm length: 446
Alignm identity: 279
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 121, 135

Conread position: 355-761
Cow position:
Alignm length: 409
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 121

Conread position: 383-791
Cow position:
Alignm length: 409
Alignm identity: 260
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 412-791
Cow position:
Alignm length: 382
Alignm identity: 246
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 244, 240

Conread position: 432-621
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 44

Conread position: 432-770
Cow position:
Alignm length: 341
Alignm identity: 216
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 210, 203

Conread position: 433-801
Cow position:
Alignm length: 370
Alignm identity: 227
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 49, 44

Conread position: 439-819
Cow position:
Alignm length: 381
Alignm identity: 238
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 362, 0

Conread position: 502-880
Cow position:
Alignm length: 390
Alignm identity: 249
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 216, 201

Show alignments to all cow chromosomes.