Cow genome map
| Conread name: | Tra1-TCH01E120085 |
| Conread position: | 1-283 |
| Cow position: | chr24:17013251-17013532 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 252, 0 |
| Conread position: | 1-349 |
| Cow position: | chr24:17070714-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 1-415 |
| Cow position: | chr24:17077922-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 1-497 |
| Cow position: | chr24:17078006-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 140 |
| Conread position: | 1-518 |
| Cow position: | chr24:17035451-17034933 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 1-586 |
| Cow position: | chr24:17070462-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-590 |
| Cow position: | chr24:17035619-17035030 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 308 |
| Conread position: | 1-746 |
| Cow position: | chr24:17035703-17034958 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 461, 478 |
| Conread position: | 1-748 |
| Cow position: | chr24:17078258-17077511 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 644, 635 |
| Conread position: | 1-765 |
| Cow position: | chr24:17036543-17035779 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 40 |
| Conread position: | 1-769 |
| Cow position: | chr24:17036291-17035523 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-779 |
| Cow position: | chr24:17036123-17035345 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 723, 701 |
| Conread position: | 1-780 |
| Cow position: | chr24:17036375-17035596 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 567, 578 |
| Conread position: | 1-792 |
| Cow position: | chr24:17036039-17035249 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 781, 0 |
| Conread position: | 1-793 |
| Cow position: | chr24:17036459-17035667 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 269 |
| Conread position: | 3-512 |
| Cow position: | chr24:17070548-17071058 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 507, 0 |
| Conread position: | 4-336 |
| Cow position: | chr24:17077835-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 11-221 |
| Cow position: | chr24:16986443-16986653 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 122, 99 |
| Conread position: | 13-374 |
| Cow position: | chr24:17013179-17013538 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 319, 0 |
| Conread position: | 13-766 |
| Cow position: | chr24:17035775-17035022 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 352 |
| Conread position: | 13-791 |
| Cow position: | chr24:17036612-17035837 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 63 |
| Conread position: | 58-791 |
| Cow position: | chr24:17078285-17077552 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 419 |
| Conread position: | 59-415 |
| Cow position: | chr24:17013143-17013497 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 10 |
| Conread position: | 66-666 |
| Cow position: | chr24:17070443-17071043 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 299 |
| Conread position: | 95-291 |
| Cow position: | chr24:16986443-16986639 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 137, 141 |
| Conread position: | 97-793 |
| Cow position: | chr24:17036612-17035919 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 136-799 |
| Cow position: | chr24:17078291-17077628 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 490, 498 |
| Conread position: | 145-748 |
| Cow position: | chr24:17070438-17071041 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-793 |
| Cow position: | chr24:17070358-17071002 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 152-528 |
| Cow position: | chr24:17013151-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 264-573 |
| Cow position: | chr24:17013178-17013487 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-793 |
| Cow position: | chr24:17078365-17077886 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-558 |
| Cow position: | chr24:16986425-16986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 140, 117 |
| Conread position: | 334-602 |
| Cow position: | chr24:17013164-17013432 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 432-760 |
| Cow position: | chr24:17013178-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.