Cow genome map
| Conread name: | Tra1-TCH01E120085 |
| Conread position: | 1-451 |
| Cow position: | chr6:49396548-49396998 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-524 |
| Cow position: | chr6:49362342-49362853 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 138, 145 |
| Conread position: | 1-543 |
| Cow position: | chr6:49428987-49429527 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 322 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 138, 145 |
| Conread position: | 1-561 |
| Cow position: | chr6:49340911-49341469 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 302 |
| Conread position: | 1-605 |
| Cow position: | chr6:49340827-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 464, 459 |
| Conread position: | 1-681 |
| Cow position: | chr6:49340743-49341423 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 370 |
| Conread position: | 1-702 |
| Cow position: | chr6:49396296-49396997 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 139 |
| Conread position: | 1-702 |
| Cow position: | chr6:49428567-49429268 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 131 |
| Conread position: | 1-725 |
| Cow position: | chr6:49428315-49429039 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 426 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 151, 140 |
| Conread position: | 1-747 |
| Cow position: | chr6:49428735-49429481 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 432 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 1-755 |
| Cow position: | chr6:49362102-49362832 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 440 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 467, 226 |
| Conread position: | 1-764 |
| Cow position: | chr6:49340659-49341422 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 717, 702 |
| Conread position: | 1-791 |
| Cow position: | chr6:49340407-49341197 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 308 |
| Conread position: | 1-791 |
| Cow position: | chr6:49340491-49341281 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-794 |
| Cow position: | chr6:49340575-49341368 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 47 |
| Conread position: | 1-799 |
| Cow position: | chr6:49428483-49429281 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 471 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 137, 144 |
| Conread position: | 2-769 |
| Cow position: | chr6:49396135-49396896 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 96 |
| Conread position: | 4-791 |
| Cow position: | chr6:49396053-49396834 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 142 |
| Conread position: | 13-535 |
| Cow position: | chr6:49396476-49396998 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 125, 133 |
| Conread position: | 16-759 |
| Cow position: | chr6:49396227-49396970 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 287 |
| Conread position: | 19-791 |
| Cow position: | chr6:49428249-49429021 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 454 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 120, 126 |
| Conread position: | 61-791 |
| Cow position: | chr6:49340385-49341113 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 71-677 |
| Cow position: | chr6:49428469-49429075 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 361 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 68, 74 |
| Conread position: | 72-707 |
| Cow position: | chr6:49428217-49428853 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 383 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 84-793 |
| Cow position: | chr6:49395882-49396584 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 417 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 212-799 |
| Cow position: | chr6:49340366-49340953 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.