Cow genome map

Conread name: Tra1-TCH01E120085

Conread position: 1-190
Cow position:
Alignm length: 190
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 140

Conread position: 1-287
Cow position:
Alignm length: 291
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 131, 136

Conread position: 1-289
Cow position:
Alignm length: 290
Alignm identity: 183
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 55, 61

Conread position: 1-426
Cow position:
Alignm length: 431
Alignm identity: 273
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 44

Conread position: 1-455
Cow position:
Alignm length: 456
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 298

Conread position: 1-486
Cow position:
Alignm length: 487
Alignm identity: 279
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 29

Conread position: 1-512
Cow position:
Alignm length: 514
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 304

Conread position: 1-584
Cow position:
Alignm length: 584
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-617
Cow position:
Alignm length: 618
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 461, 476

Conread position: 1-617
Cow position:
Alignm length: 622
Alignm identity: 380
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 30

Conread position: 1-620
Cow position:
Alignm length: 621
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 295

Conread position: 1-621
Cow position:
Alignm length: 629
Alignm identity: 388
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 138, 145

Conread position: 1-627
Cow position:
Alignm length: 635
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 61

Conread position: 1-671
Cow position:
Alignm length: 675
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 128

Conread position: 1-708
Cow position:
Alignm length: 709
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 635, 646

Conread position: 1-759
Cow position:
Alignm length: 762
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 644, 630

Conread position: 1-776
Cow position:
Alignm length: 792
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 42

Conread position: 1-789
Cow position:
Alignm length: 796
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 145

Conread position: 1-790
Cow position:
Alignm length: 798
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 141

Conread position: 1-791
Cow position:
Alignm length: 793
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 457, 374

Conread position: 1-791
Cow position:
Alignm length: 796
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 124

Conread position: 1-791
Cow position:
Alignm length: 796
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 122

Conread position: 1-791
Cow position:
Alignm length: 801
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 45

Conread position: 1-792
Cow position:
Alignm length: 793
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 210

Conread position: 1-792
Cow position:
Alignm length: 798
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 115

Conread position: 1-792
Cow position:
Alignm length: 795
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 52

Conread position: 1-794
Cow position:
Alignm length: 805
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 62

Conread position: 1-794
Cow position:
Alignm length: 805
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 134

Conread position: 1-794
Cow position:
Alignm length: 796
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 298

Conread position: 1-805
Cow position:
Alignm length: 808
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 289

Conread position: 3-540
Cow position:
Alignm length: 542
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 120

Conread position: 3-543
Cow position:
Alignm length: 546
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 3-768
Cow position:
Alignm length: 777
Alignm identity: 464
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 27

Conread position: 3-791
Cow position:
Alignm length: 794
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 133

Conread position: 3-791
Cow position:
Alignm length: 797
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 3-793
Cow position:
Alignm length: 802
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 41

Conread position: 4-578
Cow position:
Alignm length: 576
Alignm identity: 330
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 475, 464

Conread position: 5-791
Cow position:
Alignm length: 793
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 138

Conread position: 11-791
Cow position:
Alignm length: 785
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 293

Conread position: 13-789
Cow position:
Alignm length: 788
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 49

Conread position: 13-793
Cow position:
Alignm length: 784
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 19-621
Cow position:
Alignm length: 607
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 27

Conread position: 44-539
Cow position:
Alignm length: 497
Alignm identity: 287
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 87

Conread position: 46-791
Cow position:
Alignm length: 750
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 35

Conread position: 52-533
Cow position:
Alignm length: 486
Alignm identity: 284
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 67

Conread position: 56-791
Cow position:
Alignm length: 739
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 74

Conread position: 61-791
Cow position:
Alignm length: 733
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 232

Conread position: 62-791
Cow position:
Alignm length: 737
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 17

Conread position: 65-791
Cow position:
Alignm length: 731
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 62

Conread position: 78-791
Cow position:
Alignm length: 717
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 574, 536

Conread position: 82-791
Cow position:
Alignm length: 712
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 138

Conread position: 83-791
Cow position:
Alignm length: 712
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 376

Conread position: 84-791
Cow position:
Alignm length: 712
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 130

Conread position: 88-791
Cow position:
Alignm length: 711
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 58

Conread position: 95-632
Cow position:
Alignm length: 539
Alignm identity: 313
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 27

Conread position: 112-792
Cow position:
Alignm length: 693
Alignm identity: 420
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 14, 22

Conread position: 137-793
Cow position:
Alignm length: 657
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 145-526
Cow position:
Alignm length: 382
Alignm identity: 229
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 146-804
Cow position:
Alignm length: 662
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 155

Conread position: 150-781
Cow position:
Alignm length: 634
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 486, 393

Conread position: 163-794
Cow position:
Alignm length: 639
Alignm identity: 391
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 50

Conread position: 171-791
Cow position:
Alignm length: 628
Alignm identity: 372
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 39

Conread position: 194-791
Cow position:
Alignm length: 601
Alignm identity: 366
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 106, 111

Conread position: 212-793
Cow position:
Alignm length: 586
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 166

Conread position: 213-793
Cow position:
Alignm length: 584
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 424-794
Cow position:
Alignm length: 376
Alignm identity: 233
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 58

Show alignments to all cow chromosomes.