Cow genome map
| Conread name: | Tra1-TCH01E120085 |
| Conread position: | 1-411 |
| Cow position: | chr8:6957993-6957586 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 204, 218 |
| Conread position: | 1-494 |
| Cow position: | chr8:48406703-48406201 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 1-586 |
| Cow position: | chr8:48406871-48406287 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 143 |
| Conread position: | 1-605 |
| Cow position: | chr8:45201441-45202038 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 372 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 304, 292 |
| Conread position: | 1-665 |
| Cow position: | chr8:46816720-46817384 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 1-711 |
| Cow position: | chr8:46816636-46817347 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 697, 0 |
| Conread position: | 1-738 |
| Cow position: | chr8:45201189-45201926 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-746 |
| Cow position: | chr8:48407039-48406294 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 293 |
| Conread position: | 1-746 |
| Cow position: | chr8:55580909-55581654 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 303 |
| Conread position: | 1-747 |
| Cow position: | chr8:55580993-55581739 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 1-769 |
| Cow position: | chr8:45201105-45201873 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 1-777 |
| Cow position: | chr8:48407543-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 124 |
| Conread position: | 1-791 |
| Cow position: | chr8:45201021-45201811 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 30 |
| Conread position: | 1-791 |
| Cow position: | chr8:46816468-46817258 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 136 |
| Conread position: | 1-791 |
| Cow position: | chr8:55580740-55581531 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 1-793 |
| Cow position: | chr8:48407207-48406415 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 134 |
| Conread position: | 1-802 |
| Cow position: | chr8:46816048-46816847 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 472, 458 |
| Conread position: | 1-804 |
| Cow position: | chr8:46816132-46816934 (view UCSC Genome Browser custom track) |
| Alignm length: | 806 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 461, 472 |
| Conread position: | 1-812 |
| Cow position: | chr8:46815799-46816606 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 3-617 |
| Cow position: | chr8:45201359-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 3-767 |
| Cow position: | chr8:48407121-48406357 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-794 |
| Cow position: | chr8:46816386-46817177 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 120 |
| Conread position: | 6-865 |
| Cow position: | chr8:46815882-46816753 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 7-802 |
| Cow position: | chr8:46816558-46817353 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 403 |
| Conread position: | 8-793 |
| Cow position: | chr8:48407620-48406835 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 19-444 |
| Cow position: | chr8:6958059-6957635 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 278, 257 |
| Conread position: | 19-792 |
| Cow position: | chr8:46816318-46817090 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 286 |
| Conread position: | 20-793 |
| Cow position: | chr8:55580844-55581617 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 118 |
| Conread position: | 50-506 |
| Cow position: | chr8:48406738-48406280 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 413 |
| Conread position: | 60-791 |
| Cow position: | chr8:45200912-45201643 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 65-791 |
| Cow position: | chr8:48407647-48406921 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 466, 477 |
| Conread position: | 102-533 |
| Cow position: | chr8:6958060-6957630 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 280 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 233-796 |
| Cow position: | chr8:48407647-48407084 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 228 |
| Conread position: | 268-574 |
| Cow position: | chr8:6958062-6957757 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 321-791 |
| Cow position: | chr8:55580725-55581195 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 69, 46 |
| Conread position: | 432-804 |
| Cow position: | chr8:48407616-48407245 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 201, 197 |
| Conread position: | 438-680 |
| Cow position: | chr8:6958060-6957818 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 523-810 |
| Cow position: | chr8:6958059-6957772 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.