Cow genome map

Conread name: Tra1-TCH01F040078

Conread position: 274-551
Cow position: chr11:7695588-7695863 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 101

Conread position: 520-795
Cow position: chr11:41106507-41106225 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 107

Conread position: 524-801
Cow position: chr11:21853359-21853076 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 9

Conread position: 526-755
Cow position: chr11:32956925-32956686 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 526-755
Cow position: chr11:32978111-32977872 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 527-785
Cow position: chr11:41599793-41599529 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 16, 6

Conread position: 527-789
Cow position: chr11:27922689-27922959 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 0

Conread position: 527-792
Cow position: chr11:4206067-4206338 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 14

Conread position: 527-801
Cow position: chr11:70030316-70030594 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 6

Conread position: 529-795
Cow position: chr11:64843970-64844240 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 151
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 153, 121

Conread position: 530-795
Cow position: chr11:25336036-25336307 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 249

Conread position: 530-801
Cow position: chr11:12317173-12316895 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 530-801
Cow position: chr11:31865530-31865811 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 12, 183

Conread position: 530-801
Cow position: chr11:47972955-47972677 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 534-801
Cow position: chr11:67746316-67746587 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 20, 9

Conread position: 539-801
Cow position: chr11:59369128-59368860 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 0

Conread position: 540-708
Cow position: chr11:52128117-52128288 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 540-781
Cow position: chr11:46412542-46412790 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 9, 68

Conread position: 540-792
Cow position: chr11:4053429-4053186 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 167, 51

Conread position: 540-792
Cow position: chr11:5482538-5482280 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 540-792
Cow position: chr11:26122013-26121754 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 540-792
Cow position: chr11:68130320-68130567 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 105

Conread position: 540-795
Cow position: chr11:5273666-5273405 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 540-795
Cow position: chr11:41093954-41093693 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 540-795
Cow position: chr11:43361811-43361562 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 166

Conread position: 540-795
Cow position: chr11:53429114-53428854 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 204

Conread position: 540-798
Cow position: chr11:7229268-7229532 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-799
Cow position: chr11:7719607-7719342 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:417565-417298 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 242

Conread position: 540-801
Cow position: chr11:1505088-1504821 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:2294152-2293885 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 223

Conread position: 540-801
Cow position: chr11:3238209-3238477 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:3495951-3496218 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 198

Conread position: 540-801
Cow position: chr11:3999581-3999326 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position: chr11:4024441-4024180 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 12, 73

Conread position: 540-801
Cow position: chr11:4267247-4266980 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:6343368-6343634 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 14, 37

Conread position: 540-801
Cow position: chr11:9388245-9388512 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 540-801
Cow position: chr11:9432294-9432549 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 30

Conread position: 540-801
Cow position: chr11:10958737-10959004 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 540-801
Cow position: chr11:11591885-11592155 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:12353984-12353717 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:13087759-13087492 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:14260049-14259786 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 147, 15

Conread position: 540-801
Cow position: chr11:15495296-15495563 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:15835820-15836087 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 540-801
Cow position: chr11:15988196-15988463 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:16548042-16547775 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:17854002-17854269 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:17998025-17997759 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 12, 79

Conread position: 540-801
Cow position: chr11:19099577-19099310 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:20731314-20731048 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 252

Conread position: 540-801
Cow position: chr11:23494660-23494920 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 167

Conread position: 540-801
Cow position: chr11:23883255-23883522 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 540-801
Cow position: chr11:26550385-26550651 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 5

Conread position: 540-801
Cow position: chr11:26592869-26592602 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 540-801
Cow position: chr11:27660139-27660413 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 9, 81

Conread position: 540-801
Cow position: chr11:27724993-27724726 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:28226870-28226603 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:30087784-30088051 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:30200785-30200524 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position: chr11:30255341-30255613 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 540-801
Cow position: chr11:30700402-30700669 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:31834353-31834086 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:32454962-32455229 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 540-801
Cow position: chr11:32762360-32762626 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 14, 252

Conread position: 540-801
Cow position: chr11:33601732-33601464 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:35241961-35241704 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 206

Conread position: 540-801
Cow position: chr11:35542160-35541895 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 14, 119

Conread position: 540-801
Cow position: chr11:35738434-35738169 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 73

Conread position: 540-801
Cow position: chr11:36930622-36930359 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 12, 30

Conread position: 540-801
Cow position: chr11:38505323-38505056 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 540-801
Cow position: chr11:38599806-38599539 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:41167786-41167519 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 540-801
Cow position: chr11:43511067-43510800 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:47758080-47757813 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 540-801
Cow position: chr11:49171590-49171321 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 226

Conread position: 540-801
Cow position: chr11:51034184-51034451 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:52846382-52846650 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:56463270-56463538 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:58050017-58049752 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 22, 40

Conread position: 540-801
Cow position: chr11:61397713-61397446 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:62009893-62009626 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:62791803-62792069 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 204

Conread position: 540-801
Cow position: chr11:63390571-63390307 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position: chr11:63860735-63860469 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:67296099-67295832 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 540-801
Cow position: chr11:67453563-67453828 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:71332409-71332674 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 220

Conread position: 540-801
Cow position: chr11:72368961-72369229 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:73137500-73137753 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 126

Conread position: 540-801
Cow position: chr11:73798790-73798527 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 29

Conread position: 540-801
Cow position: chr11:74990528-74990795 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:80591271-80591532 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 105

Conread position: 540-801
Cow position: chr11:83000937-83001204 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:83284801-83285056 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position: chr11:84967016-84967283 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr11:85390942-85390687 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 40

Conread position: 540-802
Cow position: chr11:27938518-27938769 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 148

Conread position: 540-802
Cow position: chr11:44106593-44106858 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 540-802
Cow position: chr11:56652331-56652066 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 540-802
Cow position: chr11:74928711-74928972 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 100

Conread position: 540-802
Cow position: chr11:80789483-80789214 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-805
Cow position: chr11:17782119-17781852 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 541-801
Cow position: chr11:10093783-10094044 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 541-801
Cow position: chr11:25759662-25759917 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 76

Conread position: 541-801
Cow position: chr11:38574576-38574310 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 8, 0

Conread position: 541-801
Cow position: chr11:38832568-38832304 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 29

Conread position: 541-801
Cow position: chr11:66944280-66944034 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 541-801
Cow position: chr11:67849062-67848797 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 542-773
Cow position: chr11:87155093-87154863 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 19

Conread position: 542-782
Cow position: chr11:26482482-26482726 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 31

Conread position: 542-787
Cow position: chr11:26068208-26067949 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 542-792
Cow position: chr11:37279664-37279415 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 12, 28

Conread position: 542-801
Cow position: chr11:4675705-4675458 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 170, 27

Conread position: 542-801
Cow position: chr11:21372171-21371906 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 220

Conread position: 542-801
Cow position: chr11:28693060-28692798 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 28

Conread position: 542-801
Cow position: chr11:30164482-30164746 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 542-801
Cow position: chr11:32108685-32108941 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 48

Conread position: 542-801
Cow position: chr11:38235859-38235595 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 542-801
Cow position: chr11:67920428-67920167 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 12, 165

Conread position: 542-801
Cow position: chr11:73513462-73513198 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 202

Conread position: 542-801
Cow position: chr11:86578831-86579100 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 543-758
Cow position: chr11:26400395-26400613 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 72

Conread position: 545-801
Cow position: chr11:35142419-35142157 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 550-779
Cow position: chr11:38069214-38069451 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 550-782
Cow position: chr11:38640870-38641105 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 137, 100

Conread position: 550-782
Cow position: chr11:50949867-50950106 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 7

Conread position: 550-785
Cow position: chr11:33688125-33687890 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 54

Conread position: 550-795
Cow position: chr11:3230243-3230489 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 69

Conread position: 550-795
Cow position: chr11:12111846-12112095 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 550-795
Cow position: chr11:76566383-76566634 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 550-798
Cow position: chr11:75354123-75354379 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 29, 109

Conread position: 550-801
Cow position: chr11:8444069-8443816 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 137, 0

Conread position: 550-801
Cow position: chr11:30057126-30057370 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 50

Conread position: 550-801
Cow position: chr11:31836103-31836359 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 550-801
Cow position: chr11:32077864-32077608 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 550-801
Cow position: chr11:56227848-56228104 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 121

Conread position: 550-802
Cow position: chr11:33000799-33001047 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 161, 17

Conread position: 550-802
Cow position: chr11:49935829-49935572 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 550-802
Cow position: chr11:77746288-77746030 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 119, 0

Conread position: 551-801
Cow position: chr11:17832284-17832033 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 136, 21

Conread position: 551-801
Cow position: chr11:53772603-53772842 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 160, 10

Conread position: 552-801
Cow position: chr11:76767338-76767591 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 555-802
Cow position: chr11:40402846-40402597 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 132, 59

Conread position: 556-798
Cow position: chr11:8246114-8246355 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 5, 18

Conread position: 559-801
Cow position: chr11:8498995-8499241 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 21

Conread position: 560-801
Cow position: chr11:70602348-70602108 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 562-785
Cow position: chr11:38638394-38638169 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 88

Conread position: 562-787
Cow position: chr11:77236793-77237025 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 563-795
Cow position: chr11:65281946-65282179 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 82, 32

Conread position: 563-801
Cow position: chr11:70424324-70424565 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 88, 27

Conread position: 564-799
Cow position: chr11:40773137-40772897 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 0

Conread position: 566-801
Cow position: chr11:38842561-38842795 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 141

Conread position: 569-801
Cow position: chr11:52298225-52297987 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 118, 0

Conread position: 577-782
Cow position: chr11:66859042-66858832 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 580-795
Cow position: chr11:54728405-54728632 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 591-795
Cow position: chr11:48411487-48411697 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 99, 47

Conread position: 591-798
Cow position: chr11:12763220-12763015 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 96

Conread position: 591-801
Cow position: chr11:8844139-8844354 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 591-801
Cow position: chr11:31236439-31236228 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 78

Conread position: 591-801
Cow position: chr11:37345903-37346118 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 591-802
Cow position: chr11:44915721-44915509 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 93, 141

Conread position: 592-798
Cow position: chr11:53280439-53280228 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 39

Conread position: 592-801
Cow position: chr11:58139655-58139869 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 95, 0

Conread position: 592-802
Cow position: chr11:48658692-48658906 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 97, 22

Conread position: 595-786
Cow position: chr11:7307018-7307208 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 34

Conread position: 598-789
Cow position: chr11:14469476-14469661 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 599-789
Cow position: chr11:64904056-64904251 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 8

Conread position: 601-792
Cow position: chr11:14650266-14650070 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 89, 0

Conread position: 608-785
Cow position: chr11:33687496-33687313 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 608-787
Cow position: chr11:28381649-28381828 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 85, 55

Conread position: 611-792
Cow position: chr11:9079354-9079175 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 110

Conread position: 613-782
Cow position: chr11:4032495-4032321 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 616-801
Cow position: chr11:71078415-71078598 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 17, 73

Conread position: 617-801
Cow position: chr11:10100034-10100223 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 70, 0

Conread position: 620-795
Cow position: chr11:44233412-44233590 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 620-801
Cow position: chr11:25332747-25332563 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 620-801
Cow position: chr11:51477625-51477809 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 140

Conread position: 622-801
Cow position: chr11:66664428-66664245 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 111

Conread position: 622-801
Cow position: chr11:81576689-81576507 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 626-780
Cow position: chr11:10303146-10302991 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 28

Conread position: 634-795
Cow position: chr11:21820397-21820232 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 635-798
Cow position: chr11:63167517-63167351 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 651-805
Cow position: chr11:37304209-37304367 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 109

Conread position: 657-801
Cow position: chr11:45632932-45632783 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.