Cow genome map

Conread name: Tra1-TCH01F040078

Conread position: 514-801
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 21

Conread position: 516-795
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 516-801
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 26, 17

Conread position: 520-792
Cow position:
Alignm length: 278
Alignm identity: 159
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 15

Conread position: 527-787
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 6

Conread position: 528-805
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 53

Conread position: 530-801
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 530-801
Cow position:
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 41

Conread position: 535-792
Cow position:
Alignm length: 263
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 152, 34

Conread position: 538-801
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 538-802
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 33

Conread position: 539-801
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 154

Conread position: 540-747
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 42

Conread position: 540-774
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-785
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 32

Conread position: 540-787
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 111

Conread position: 540-789
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 540-792
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 73

Conread position: 540-794
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 30

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 540-795
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 75

Conread position: 540-798
Cow position:
Alignm length: 265
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-798
Cow position:
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 148, 30

Conread position: 540-799
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 14, 123

Conread position: 540-801
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 210

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 116

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 111

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 182

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 30

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 40

Conread position: 540-801
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 145

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 192

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 28

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 90

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 51

Conread position: 540-801
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 136

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 145, 61

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 12, 167

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 52

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 116

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 77

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 147, 100

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 540-801
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 203

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 9, 40

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 190
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 21, 59

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 30

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-802
Cow position:
Alignm length: 274
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 540-802
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 14, 169

Conread position: 540-802
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 11, 30

Conread position: 540-802
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 541-747
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 13, 74

Conread position: 541-778
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 15, 29

Conread position: 541-789
Cow position:
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 541-801
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 541-801
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 234

Conread position: 542-713
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 12, 60

Conread position: 542-773
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 89

Conread position: 542-789
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 12, 103

Conread position: 542-799
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 12, 38

Conread position: 542-800
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 12, 59

Conread position: 542-801
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 78

Conread position: 542-801
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 121

Conread position: 542-801
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 19, 127

Conread position: 542-801
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 543-801
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 5

Conread position: 545-798
Cow position:
Alignm length: 262
Alignm identity: 176
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 549-801
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 138, 18

Conread position: 549-802
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 8

Conread position: 550-799
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 57

Conread position: 550-801
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 140, 17

Conread position: 550-801
Cow position:
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 94

Conread position: 550-801
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 139, 57

Conread position: 550-801
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 143, 0

Conread position: 550-801
Cow position:
Alignm length: 264
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 128, 0

Conread position: 550-801
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 137, 29

Conread position: 550-801
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 137, 116

Conread position: 550-802
Cow position:
Alignm length: 258
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 137, 105

Conread position: 550-802
Cow position:
Alignm length: 255
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 162, 17

Conread position: 550-802
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 157, 75

Conread position: 553-794
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 16

Conread position: 554-802
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 5, 32

Conread position: 560-775
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 127, 19

Conread position: 560-789
Cow position:
Alignm length: 235
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 105

Conread position: 562-792
Cow position:
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 59

Conread position: 562-795
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 201

Conread position: 564-781
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 564-801
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 123, 6

Conread position: 565-801
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 568-792
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 15

Conread position: 570-789
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 573-801
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 114, 0

Conread position: 574-789
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 186

Conread position: 574-801
Cow position:
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 580-801
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 107, 62

Conread position: 583-801
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 56

Conread position: 587-801
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 57

Conread position: 591-801
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 16

Conread position: 591-801
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 117

Conread position: 593-801
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 94, 23

Conread position: 594-801
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 0

Conread position: 598-801
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 130

Conread position: 607-795
Cow position:
Alignm length: 191
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 107

Conread position: 613-801
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 613-801
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 614-801
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 60

Conread position: 615-801
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 35

Conread position: 616-789
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 620-801
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 0

Conread position: 622-801
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 58

Conread position: 622-801
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 55

Conread position: 622-801
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 624-795
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 66, 26

Conread position: 625-795
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 627-801
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 161

Conread position: 630-802
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 59, 132

Conread position: 637-801
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 638-801
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 49, 35

Conread position: 639-801
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 131

Conread position: 655-802
Cow position:
Alignm length: 153
Alignm identity: 124
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 5

Conread position: 657-795
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.