Cow genome map
Conread name: | Tra1-TCH01F040078 |
Conread position: | 516-798 |
Cow position: | chr17:731446-731165 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 17 |
Conread position: | 516-801 |
Cow position: | chr17:15438836-15439127 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 17 |
Conread position: | 520-792 |
Cow position: | chr17:29156419-29156700 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 190 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 520-795 |
Cow position: | chr17:2839074-2839348 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 196 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 23, 13 |
Conread position: | 524-801 |
Cow position: | chr17:15809040-15809323 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 204 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 18, 9 |
Conread position: | 527-801 |
Cow position: | chr17:3780711-3780986 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 184 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 16, 78 |
Conread position: | 527-801 |
Cow position: | chr17:21766953-21767226 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 200 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 15, 8 |
Conread position: | 529-795 |
Cow position: | chr17:2201355-2201627 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 530-799 |
Cow position: | chr17:29471497-29471764 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 206 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 12, 62 |
Conread position: | 530-801 |
Cow position: | chr17:4085125-4085399 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 198 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 12, 229 |
Conread position: | 538-798 |
Cow position: | chr17:20094091-20093827 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 89 |
Conread position: | 538-801 |
Cow position: | chr17:2244999-2244736 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 199 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 16, 137 |
Conread position: | 539-801 |
Cow position: | chr17:2583460-2583723 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 168 |
Conread position: | 540-779 |
Cow position: | chr17:4063409-4063652 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 176 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 14, 29 |
Conread position: | 540-781 |
Cow position: | chr17:20078598-20078359 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 185 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 14, 40 |
Conread position: | 540-789 |
Cow position: | chr17:138677-138926 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 184 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 14, 145 |
Conread position: | 540-795 |
Cow position: | chr17:1569145-1568891 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 192 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 14, 49 |
Conread position: | 540-795 |
Cow position: | chr17:31232746-31233000 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 198 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 21, 79 |
Conread position: | 540-796 |
Cow position: | chr17:2177049-2177310 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 540-798 |
Cow position: | chr17:8222774-8223038 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 540-801 |
Cow position: | chr17:147991-148242 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 178 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 14, 30 |
Conread position: | 540-801 |
Cow position: | chr17:184216-184483 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 540-801 |
Cow position: | chr17:2265258-2265524 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 75 |
Conread position: | 540-801 |
Cow position: | chr17:6262925-6263190 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 192 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 21, 110 |
Conread position: | 540-801 |
Cow position: | chr17:8212130-8212392 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 192 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 14, 47 |
Conread position: | 540-801 |
Cow position: | chr17:11084066-11083799 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 540-801 |
Cow position: | chr17:14006496-14006750 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 183 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 14, 55 |
Conread position: | 540-801 |
Cow position: | chr17:14242898-14243162 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 194 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 147, 15 |
Conread position: | 540-801 |
Cow position: | chr17:15853803-15854071 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 192 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 540-801 |
Cow position: | chr17:16447409-16447146 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 30 |
Conread position: | 540-801 |
Cow position: | chr17:16870208-16869961 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 13, 46 |
Conread position: | 540-801 |
Cow position: | chr17:16903653-16903915 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 195 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 21, 40 |
Conread position: | 540-801 |
Cow position: | chr17:17128074-17128340 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 189 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 540-801 |
Cow position: | chr17:17957666-17957933 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 195 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 540-801 |
Cow position: | chr17:18100005-18099738 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 540-801 |
Cow position: | chr17:18123601-18123340 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 14, 105 |
Conread position: | 540-801 |
Cow position: | chr17:18200806-18201057 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 189 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 11, 75 |
Conread position: | 540-801 |
Cow position: | chr17:24785259-24785526 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 540-801 |
Cow position: | chr17:25739365-25739632 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 540-801 |
Cow position: | chr17:29824892-29824624 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 75 |
Conread position: | 540-801 |
Cow position: | chr17:29950284-29950548 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 40 |
Conread position: | 540-801 |
Cow position: | chr17:37415819-37415556 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 193 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 14, 185 |
Conread position: | 540-801 |
Cow position: | chr17:40810820-40811079 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 191 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 14, 207 |
Conread position: | 540-801 |
Cow position: | chr17:43991557-43991820 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 178 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 14, 150 |
Conread position: | 540-802 |
Cow position: | chr17:16855028-16854760 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 14, 48 |
Conread position: | 540-802 |
Cow position: | chr17:43471522-43471254 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 193 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 541-795 |
Cow position: | chr17:21666074-21666329 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 189 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 13, 110 |
Conread position: | 541-798 |
Cow position: | chr17:13910538-13910284 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 178 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 11, 105 |
Conread position: | 541-801 |
Cow position: | chr17:4635705-4635447 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 166 |
Conread position: | 541-801 |
Cow position: | chr17:16118389-16118129 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 50 |
Conread position: | 542-795 |
Cow position: | chr17:22563216-22563474 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 187 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 12, 109 |
Conread position: | 542-799 |
Cow position: | chr17:14250037-14249771 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 196 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 542-801 |
Cow position: | chr17:8994265-8994004 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 192 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 11, 71 |
Conread position: | 542-801 |
Cow position: | chr17:15374476-15374726 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 191 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 12, 38 |
Conread position: | 542-801 |
Cow position: | chr17:38828954-38829216 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 194 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 12, 26 |
Conread position: | 542-802 |
Cow position: | chr17:29041828-29041566 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 186 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 12, 49 |
Conread position: | 550-788 |
Cow position: | chr17:20215163-20215406 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 177 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 132, 57 |
Conread position: | 550-792 |
Cow position: | chr17:5043513-5043265 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 177 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 35, 79 |
Conread position: | 550-794 |
Cow position: | chr17:20084733-20084482 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 188 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 550-795 |
Cow position: | chr17:36790150-36790396 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 177 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 75, 41 |
Conread position: | 550-798 |
Cow position: | chr17:29079460-29079690 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 180 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 140, 19 |
Conread position: | 550-799 |
Cow position: | chr17:29083258-29083502 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 167 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 550-801 |
Cow position: | chr17:254178-254429 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 184 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 137, 17 |
Conread position: | 550-801 |
Cow position: | chr17:18591503-18591746 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 175 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 137, 22 |
Conread position: | 562-800 |
Cow position: | chr17:36747429-36747194 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 177 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 138, 82 |
Conread position: | 562-801 |
Cow position: | chr17:8449805-8450046 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 169 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 125, 76 |
Conread position: | 566-801 |
Cow position: | chr17:16505651-16505411 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 577-801 |
Cow position: | chr17:36266161-36265938 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 28, 79 |
Conread position: | 591-786 |
Cow position: | chr17:33792195-33792393 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 145 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 23, 39 |
Conread position: | 591-794 |
Cow position: | chr17:20091489-20091294 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 150 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 20, 8 |
Conread position: | 591-798 |
Cow position: | chr17:15335318-15335106 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 153 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 88, 161 |
Conread position: | 591-798 |
Cow position: | chr17:29897761-29897968 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 148 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 98, 165 |
Conread position: | 591-801 |
Cow position: | chr17:27978226-27978439 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 151 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 99, 21 |
Conread position: | 591-801 |
Cow position: | chr17:40801873-40802083 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 153 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 116, 84 |
Conread position: | 596-801 |
Cow position: | chr17:42313010-42313220 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 167 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 598-803 |
Cow position: | chr17:12290359-12290148 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 172 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 89, 140 |
Conread position: | 600-802 |
Cow position: | chr17:1709489-1709689 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 148 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 87, 44 |
Conread position: | 601-801 |
Cow position: | chr17:22774329-22774127 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 157 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 86, 43 |
Conread position: | 604-798 |
Cow position: | chr17:36159900-36159701 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 142 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 608-802 |
Cow position: | chr17:16216573-16216767 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 143 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 105, 66 |
Conread position: | 613-801 |
Cow position: | chr17:13725407-13725598 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 74, 175 |
Conread position: | 618-802 |
Cow position: | chr17:980037-979848 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 145 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 619-801 |
Cow position: | chr17:3652578-3652391 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 629-801 |
Cow position: | chr17:33934660-33934485 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 58, 19 |
Conread position: | 634-801 |
Cow position: | chr17:42258042-42258216 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 9, 102 |
Conread position: | 646-801 |
Cow position: | chr17:3197454-3197294 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 661-801 |
Cow position: | chr17:41014359-41014495 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 107, 15 |
Show alignments to all cow chromosomes.