Cow genome map


           Conread name:
           Tra1-TCH01F040078
        

               Conread position:
               264-493
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               526-801
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 219
               

               Conread position:
               527-786
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 134
               

               Conread position:
               527-792
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               530-801
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               530-801
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               14, 150
               

               Conread position:
               530-801
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 162
               

               Conread position:
               538-795
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 79
               

               Conread position:
               538-801
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 118
               

               Conread position:
               540-745
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               540-774
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               540-789
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               540-792
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 15
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               540-799
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               151, 15
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               12, 205
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               14, 106
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 196
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 222
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-802
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               541-801
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 115
               

               Conread position:
               541-802
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               542-787
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               542-789
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               106, 48
               

               Conread position:
               542-795
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               12, 89
               

               Conread position:
               542-795
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               542-798
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 19
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               12, 49
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               543-801
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               144, 13
               

               Conread position:
               546-801
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               141, 75
               

               Conread position:
               546-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               74, 82
               

               Conread position:
               549-801
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               136, 238
               

               Conread position:
               550-782
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               140, 9
               

               Conread position:
               550-792
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 53
               

               Conread position:
               550-798
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               70, 81
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               175, 62
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               137, 100
               

               Conread position:
               552-787
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               135, 201
               

               Conread position:
               555-799
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               132, 119
               

               Conread position:
               560-801
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               564-792
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               123, 80
               

               Conread position:
               564-801
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               569-798
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               118, 52
               

               Conread position:
               572-801
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               574-789
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               177, 81
               

               Conread position:
               586-798
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               591-797
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               591-800
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               102, 32
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               96, 135
               

               Conread position:
               591-802
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               96, 53
               

               Conread position:
               592-792
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               593-801
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               595-770
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               595-770
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               596-801
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               94, 59
               

               Conread position:
               596-801
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 110
               

               Conread position:
               609-801
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               613-801
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               617-801
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               617-801
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               620-801
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               620-801
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               621-792
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               621-802
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               69, 134
               

               Conread position:
               629-801
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               634-798
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               646-802
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               662-789
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 28
               
Show alignments to all cow chromosomes.