Cow genome map

Conread name: Tra1-TCH01F040078

Conread position: 520-795
Cow position:
Alignm length: 289
Alignm identity: 194
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 526-795
Cow position:
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 7

Conread position: 528-802
Cow position:
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 117

Conread position: 538-801
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 539-801
Cow position:
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 540-672
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 540-755
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 74, 10

Conread position: 540-772
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 30

Conread position: 540-782
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 131, 45

Conread position: 540-788
Cow position:
Alignm length: 255
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 540-789
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 167

Conread position: 540-792
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 29

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 540-795
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 51

Conread position: 540-795
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 14, 221

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 68

Conread position: 540-796
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-799
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 195

Conread position: 540-799
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 540-799
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 41

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 540-801
Cow position:
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 167

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 33

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 94

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 18

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 122

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 260

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 12, 105

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 208

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 73

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 219

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 147, 23

Conread position: 540-801
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 230

Conread position: 540-801
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 105

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-802
Cow position:
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 48

Conread position: 541-799
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 541-801
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 541-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 76

Conread position: 541-801
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 541-801
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 542-778
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 40

Conread position: 542-789
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 542-792
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 49

Conread position: 542-795
Cow position:
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 542-795
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 191

Conread position: 542-801
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 542-801
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 7, 108

Conread position: 542-801
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 11, 17

Conread position: 542-801
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 17

Conread position: 542-801
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 542-801
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 86

Conread position: 542-805
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 38

Conread position: 543-795
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 49

Conread position: 546-793
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 550-787
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 140, 37

Conread position: 550-792
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 550-792
Cow position:
Alignm length: 250
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 169

Conread position: 550-801
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 550-801
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 550-801
Cow position:
Alignm length: 252
Alignm identity: 173
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 550-801
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 165, 110

Conread position: 550-801
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 137, 192

Conread position: 550-801
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 140, 156

Conread position: 550-801
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 60, 19

Conread position: 550-801
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 137, 54

Conread position: 550-802
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 124

Conread position: 560-801
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 120, 0

Conread position: 573-787
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 118, 77

Conread position: 573-789
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 114, 41

Conread position: 575-802
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 115, 180

Conread position: 580-801
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 107, 195

Conread position: 580-802
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 110, 101

Conread position: 582-801
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 0

Conread position: 591-794
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 591-801
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 96, 123

Conread position: 591-801
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 34

Conread position: 591-801
Cow position:
Alignm length: 217
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 96, 171

Conread position: 591-801
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 37

Conread position: 591-801
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 96, 0

Conread position: 598-798
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 599-795
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 56

Conread position: 599-801
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 88, 28

Conread position: 605-795
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 607-792
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 137

Conread position: 613-795
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 98, 38

Conread position: 615-801
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 119, 71

Conread position: 620-802
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 85

Conread position: 624-789
Cow position:
Alignm length: 172
Alignm identity: 132
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 627-798
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 630-801
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 134

Conread position: 630-801
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 129

Conread position: 634-801
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 34

Conread position: 636-792
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 640-801
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 646-802
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 647-801
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.