Cow genome map
| Conread name: | Tra1-TCH01F040078 |
| Conread position: | 514-801 |
| Cow position: | chr21:13749506-13749797 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 520-792 |
| Cow position: | chr21:38450638-38450366 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 525-801 |
| Cow position: | chr21:28476659-28476931 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 526-796 |
| Cow position: | chr21:1766157-1765896 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 527-802 |
| Cow position: | chr21:4722015-4722276 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 530-795 |
| Cow position: | chr21:34255218-34254959 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 530-801 |
| Cow position: | chr21:25156660-25156922 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 530-802 |
| Cow position: | chr21:45782365-45782093 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 537-802 |
| Cow position: | chr21:17418269-17417998 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 538-792 |
| Cow position: | chr21:3046707-3046954 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 538-792 |
| Cow position: | chr21:17474087-17474345 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 538-801 |
| Cow position: | chr21:22315900-22316162 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 24 |
| Conread position: | 538-802 |
| Cow position: | chr21:31252355-31252626 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 540-780 |
| Cow position: | chr21:27375477-27375723 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 540-786 |
| Cow position: | chr21:12153194-12153441 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 540-786 |
| Cow position: | chr21:29423434-29423684 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 540-789 |
| Cow position: | chr21:33832608-33832350 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 540-792 |
| Cow position: | chr21:13302577-13302824 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 540-792 |
| Cow position: | chr21:27620129-27619882 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 540-795 |
| Cow position: | chr21:33316995-33316734 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-795 |
| Cow position: | chr21:33728479-33728739 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 540-795 |
| Cow position: | chr21:48530539-48530803 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 540-796 |
| Cow position: | chr21:2878466-2878207 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 540-797 |
| Cow position: | chr21:4898593-4898330 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-799 |
| Cow position: | chr21:39417448-39417711 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 540-801 |
| Cow position: | chr21:45074-45340 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 540-801 |
| Cow position: | chr21:149518-149785 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:470660-470930 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 540-801 |
| Cow position: | chr21:2514222-2514485 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 205 |
| Conread position: | 540-801 |
| Cow position: | chr21:3782144-3782410 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 9, 189 |
| Conread position: | 540-801 |
| Cow position: | chr21:4559699-4559436 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 540-801 |
| Cow position: | chr21:4586308-4586039 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 224 |
| Conread position: | 540-801 |
| Cow position: | chr21:4812967-4812706 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 540-801 |
| Cow position: | chr21:5020517-5020780 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 223 |
| Conread position: | 540-801 |
| Cow position: | chr21:6623185-6623451 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 15 |
| Conread position: | 540-801 |
| Cow position: | chr21:6966101-6965834 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:7047809-7047544 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 540-801 |
| Cow position: | chr21:9010737-9010469 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:10570658-10570925 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:10853636-10853903 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:11144479-11144212 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 223 |
| Conread position: | 540-801 |
| Cow position: | chr21:11509312-11509579 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:13300199-13300455 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 540-801 |
| Cow position: | chr21:17144059-17144326 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:20244229-20243962 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:25986787-25987052 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 99 |
| Conread position: | 540-801 |
| Cow position: | chr21:26400393-26400131 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 147, 30 |
| Conread position: | 540-801 |
| Cow position: | chr21:26874963-26875229 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 540-801 |
| Cow position: | chr21:27066228-27065961 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:27287350-27287611 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 540-801 |
| Cow position: | chr21:27608329-27608064 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 10 |
| Conread position: | 540-801 |
| Cow position: | chr21:28259041-28259299 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 540-801 |
| Cow position: | chr21:28915604-28915338 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:29499909-29500176 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:30966572-30966305 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:31512899-31512633 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 126 |
| Conread position: | 540-801 |
| Cow position: | chr21:33256927-33257194 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:33934534-33934276 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 130 |
| Conread position: | 540-801 |
| Cow position: | chr21:33965348-33965093 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 14, 151 |
| Conread position: | 540-801 |
| Cow position: | chr21:34657365-34657628 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 540-801 |
| Cow position: | chr21:34900303-34900036 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:36376361-36376619 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 151 |
| Conread position: | 540-801 |
| Cow position: | chr21:36534837-36534570 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:37923558-37923814 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 540-801 |
| Cow position: | chr21:42917164-42917431 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr21:43404066-43403800 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 540-801 |
| Cow position: | chr21:46974359-46974096 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 540-801 |
| Cow position: | chr21:47648711-47648980 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-802 |
| Cow position: | chr21:49655812-49655544 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-804 |
| Cow position: | chr21:9895733-9895998 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 540-804 |
| Cow position: | chr21:32534200-32534461 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 540-805 |
| Cow position: | chr21:28881044-28881310 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 541-801 |
| Cow position: | chr21:5642464-5642199 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 136, 15 |
| Conread position: | 541-801 |
| Cow position: | chr21:15546316-15546055 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 541-801 |
| Cow position: | chr21:26633857-26633592 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 541-801 |
| Cow position: | chr21:30565126-30565383 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 541-801 |
| Cow position: | chr21:30595718-30595452 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 222 |
| Conread position: | 541-801 |
| Cow position: | chr21:47360797-47360535 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 542-781 |
| Cow position: | chr21:27522449-27522211 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 12, 84 |
| Conread position: | 542-795 |
| Cow position: | chr21:27125345-27125086 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 542-800 |
| Cow position: | chr21:18285179-18285442 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 221 |
| Conread position: | 542-801 |
| Cow position: | chr21:3766397-3766132 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 542-801 |
| Cow position: | chr21:17720956-17721216 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 139, 17 |
| Conread position: | 542-801 |
| Cow position: | chr21:18931552-18931812 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 141, 27 |
| Conread position: | 542-801 |
| Cow position: | chr21:22719724-22719463 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 542-802 |
| Cow position: | chr21:2293809-2293543 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 542-802 |
| Cow position: | chr21:19964982-19965243 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 543-801 |
| Cow position: | chr21:9208687-9208947 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 543-801 |
| Cow position: | chr21:28597966-28598228 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 544-801 |
| Cow position: | chr21:18787134-18786875 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 164 |
| Conread position: | 544-801 |
| Cow position: | chr21:39059944-39059692 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 544-801 |
| Cow position: | chr21:44862216-44861959 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 549-801 |
| Cow position: | chr21:2419578-2419832 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 139 |
| Conread position: | 550-762 |
| Cow position: | chr21:2537775-2537560 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 133, 154 |
| Conread position: | 550-768 |
| Cow position: | chr21:1284564-1284342 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 137, 70 |
| Conread position: | 550-785 |
| Cow position: | chr21:27343016-27342780 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 140, 57 |
| Conread position: | 550-789 |
| Cow position: | chr21:32573362-32573607 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 81, 57 |
| Conread position: | 550-789 |
| Cow position: | chr21:46831184-46830939 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 550-795 |
| Cow position: | chr21:81129-81370 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 550-795 |
| Cow position: | chr21:39400618-39400867 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 550-801 |
| Cow position: | chr21:2503125-2503380 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 105, 64 |
| Conread position: | 550-801 |
| Cow position: | chr21:3253005-3253271 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 241 |
| Conread position: | 550-801 |
| Cow position: | chr21:5010088-5009831 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 550-801 |
| Cow position: | chr21:13735779-13735524 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 550-801 |
| Cow position: | chr21:15585325-15585087 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 137, 78 |
| Conread position: | 550-801 |
| Cow position: | chr21:16277784-16278039 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 207 |
| Conread position: | 550-801 |
| Cow position: | chr21:31275726-31275980 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 137, 13 |
| Conread position: | 550-802 |
| Cow position: | chr21:30627697-30627444 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 153 |
| Conread position: | 550-805 |
| Cow position: | chr21:25190033-25190294 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 551-785 |
| Cow position: | chr21:28616649-28616877 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 551-798 |
| Cow position: | chr21:4733148-4732905 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 160, 43 |
| Conread position: | 551-802 |
| Cow position: | chr21:2768460-2768204 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 136, 111 |
| Conread position: | 552-789 |
| Cow position: | chr21:18819252-18819007 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 552-799 |
| Cow position: | chr21:16890454-16890204 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 141, 38 |
| Conread position: | 560-792 |
| Cow position: | chr21:1057854-1058091 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 562-792 |
| Cow position: | chr21:48234921-48234691 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 128, 53 |
| Conread position: | 569-803 |
| Cow position: | chr21:24297662-24297434 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 580-801 |
| Cow position: | chr21:43115-43340 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 34 |
| Conread position: | 580-802 |
| Cow position: | chr21:13090369-13090151 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 582-801 |
| Cow position: | chr21:39508555-39508339 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 591-795 |
| Cow position: | chr21:42558197-42558406 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 591-801 |
| Cow position: | chr21:4541755-4541549 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 591-801 |
| Cow position: | chr21:26628191-26628406 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 597-803 |
| Cow position: | chr21:26830128-26829923 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 604-795 |
| Cow position: | chr21:21217037-21216843 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 10 |
| Conread position: | 604-795 |
| Cow position: | chr21:23802002-23801805 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 612-792 |
| Cow position: | chr21:28210313-28210493 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 613-801 |
| Cow position: | chr21:44762235-44762046 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 74, 36 |
| Conread position: | 618-801 |
| Cow position: | chr21:4035829-4035645 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 618-801 |
| Cow position: | chr21:17207628-17207816 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 619-782 |
| Cow position: | chr21:33245815-33245647 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 620-792 |
| Cow position: | chr21:16768671-16768494 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 621-801 |
| Cow position: | chr21:39700980-39700795 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 625-798 |
| Cow position: | chr21:18573980-18574159 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 625-801 |
| Cow position: | chr21:4282956-4282773 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 34, 160 |
| Conread position: | 628-799 |
| Cow position: | chr21:18979705-18979533 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 91 |
| Conread position: | 629-787 |
| Cow position: | chr21:42364397-42364559 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 66 |
| Conread position: | 630-801 |
| Cow position: | chr21:2905330-2905155 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 635-788 |
| Cow position: | chr21:8126812-8126655 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 635-801 |
| Cow position: | chr21:3497039-3496868 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 636-789 |
| Cow position: | chr21:42842820-42842663 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 636-793 |
| Cow position: | chr21:20263208-20263046 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 125 |
| Conread position: | 639-801 |
| Cow position: | chr21:28028101-28028266 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 123 |
| Conread position: | 644-801 |
| Cow position: | chr21:20588183-20588344 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 651-795 |
| Cow position: | chr21:13111639-13111490 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 654-801 |
| Cow position: | chr21:744209-744066 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 682-802 |
| Cow position: | chr21:5594852-5594975 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.