Cow genome map

Conread name: Tra1-TCH01F040078

Conread position: 514-786
Cow position: chr23:17403779-17404057 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 21

Conread position: 516-790
Cow position: chr23:6593757-6593488 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 17

Conread position: 516-801
Cow position: chr23:671339-671630 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 527-799
Cow position: chr23:20389843-20389565 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 16, 6

Conread position: 530-801
Cow position: chr23:1311393-1311112 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 13, 29

Conread position: 530-801
Cow position: chr23:17846178-17846449 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 67

Conread position: 530-801
Cow position: chr23:28306022-28306303 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 11, 51

Conread position: 540-680
Cow position: chr23:13536614-13536755 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 540-755
Cow position: chr23:11712476-11712254 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 123

Conread position: 540-792
Cow position: chr23:2473109-2472851 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 12, 30

Conread position: 540-792
Cow position: chr23:15215643-15215388 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 14, 40

Conread position: 540-794
Cow position: chr23:1399023-1398779 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 12, 100

Conread position: 540-795
Cow position: chr23:36028061-36027800 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-798
Cow position: chr23:30634403-30634139 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-799
Cow position: chr23:40773521-40773786 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 14, 51

Conread position: 540-800
Cow position: chr23:14265538-14265800 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 14, 117

Conread position: 540-801
Cow position: chr23:771300-771033 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:1959318-1959585 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:2320753-2320492 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 153, 36

Conread position: 540-801
Cow position: chr23:2409020-2408757 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 37

Conread position: 540-801
Cow position: chr23:2761090-2761356 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 96

Conread position: 540-801
Cow position: chr23:2791571-2791315 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 106

Conread position: 540-801
Cow position: chr23:3302046-3302313 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:4891887-4892154 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 221

Conread position: 540-801
Cow position: chr23:5396389-5396121 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:5624381-5624121 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 105

Conread position: 540-801
Cow position: chr23:8707582-8707849 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:11343688-11343955 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:11377126-11376859 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:11781976-11782244 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:14216033-14215776 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 540-801
Cow position: chr23:14959760-14959499 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 73

Conread position: 540-801
Cow position: chr23:14970760-14970496 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 127

Conread position: 540-801
Cow position: chr23:15180150-15180416 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:15528778-15529045 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:16496084-16495818 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 111

Conread position: 540-801
Cow position: chr23:19493040-19493307 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:20153030-20152762 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:24119746-24120013 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:25357537-25357804 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:26828444-26828707 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 111

Conread position: 540-801
Cow position: chr23:27313036-27313303 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:27402328-27402592 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 100

Conread position: 540-801
Cow position: chr23:28221892-28222160 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:28987534-28987800 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:29042974-29043242 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:30623307-30623043 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 15

Conread position: 540-801
Cow position: chr23:31605619-31605886 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 540-801
Cow position: chr23:37199322-37199052 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position: chr23:38935023-38934776 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 11, 64

Conread position: 540-802
Cow position: chr23:2023893-2023625 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 541-801
Cow position: chr23:21772717-21772451 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 541-801
Cow position: chr23:24098320-24098586 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 542-785
Cow position: chr23:1535319-1535565 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 37

Conread position: 542-792
Cow position: chr23:20025127-20025383 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 542-799
Cow position: chr23:36308406-36308660 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 103

Conread position: 542-801
Cow position: chr23:8290654-8290912 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 12, 115

Conread position: 542-801
Cow position: chr23:16999637-16999898 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 13, 28

Conread position: 542-801
Cow position: chr23:22144116-22143852 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 145, 0

Conread position: 542-805
Cow position: chr23:1326119-1325853 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 545-793
Cow position: chr23:32008180-32007943 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 34

Conread position: 545-801
Cow position: chr23:4516735-4516991 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 9, 46

Conread position: 549-785
Cow position: chr23:2180646-2180407 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 90

Conread position: 550-795
Cow position: chr23:4436821-4437069 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 143, 100

Conread position: 550-795
Cow position: chr23:29625176-29625431 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 550-795
Cow position: chr23:31833797-31833550 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 137, 69

Conread position: 550-799
Cow position: chr23:40825003-40825255 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 30

Conread position: 550-801
Cow position: chr23:1338288-1338035 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 140, 94

Conread position: 550-801
Cow position: chr23:11078480-11078736 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 20, 98

Conread position: 550-801
Cow position: chr23:12863907-12864157 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 137, 22

Conread position: 550-801
Cow position: chr23:25553794-25554050 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 137, 57

Conread position: 551-801
Cow position: chr23:11128223-11128476 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 560-799
Cow position: chr23:29446734-29446493 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 129, 79

Conread position: 561-792
Cow position: chr23:19057143-19056903 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 19

Conread position: 562-747
Cow position: chr23:25670566-25670380 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 69, 65

Conread position: 562-785
Cow position: chr23:40889989-40890213 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 163

Conread position: 562-798
Cow position: chr23:7359672-7359912 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 28

Conread position: 569-801
Cow position: chr23:40553901-40553664 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 0

Conread position: 580-795
Cow position: chr23:20541208-20541420 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 109, 34

Conread position: 584-801
Cow position: chr23:12977994-12978212 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 126, 92

Conread position: 607-801
Cow position: chr23:11405424-11405227 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 32

Conread position: 616-801
Cow position: chr23:39389337-39389527 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 617-801
Cow position: chr23:29472040-29471851 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 156
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 70, 0

Conread position: 620-801
Cow position: chr23:6173748-6173562 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 5

Conread position: 625-801
Cow position: chr23:1113229-1113410 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 627-795
Cow position: chr23:14839909-14839736 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 636-801
Cow position: chr23:26230418-26230588 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 645-801
Cow position: chr23:39108522-39108362 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 82

Conread position: 653-789
Cow position: chr23:25370587-25370447 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 653-801
Cow position: chr23:25412195-25412042 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Show alignments to all cow chromosomes.