Cow genome map


           Conread name:
           Tra1-TCH01F040078
        

               Conread position:
               520-801
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               32, 81
               

               Conread position:
               530-801
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 162
               

               Conread position:
               530-802
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               538-798
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 225
               

               Conread position:
               538-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               540-785
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               540-785
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               540-786
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-787
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 164
               

               Conread position:
               540-787
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               540-789
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-792
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               540-792
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 197
               

               Conread position:
               540-792
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               145, 163
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               9, 68
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 15
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               14, 113
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 223
               

               Conread position:
               540-800
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 211
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 10
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 30
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               14, 111
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 111
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               147, 10
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 115
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 50
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               147, 10
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               540-802
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               540-802
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               541-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               541-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               542-798
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 109
               

               Conread position:
               542-802
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               542-802
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               542-802
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               543-795
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               144, 20
               

               Conread position:
               543-801
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               545-795
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               142, 10
               

               Conread position:
               549-799
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 10
               

               Conread position:
               550-787
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               550-792
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               186, 57
               

               Conread position:
               550-795
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               140, 64
               

               Conread position:
               550-795
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               157, 0
               

               Conread position:
               550-795
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               63, 79
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               550-802
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               553-801
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               141, 19
               

               Conread position:
               558-801
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               560-801
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               134, 30
               

               Conread position:
               560-801
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               133, 129
               

               Conread position:
               560-801
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               189, 53
               

               Conread position:
               565-802
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               147, 86
               

               Conread position:
               580-801
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               591-798
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 50
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               593-801
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               94, 57
               

               Conread position:
               596-801
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               601-801
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               601-801
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               613-798
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               616-792
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               616-792
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               620-801
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               620-801
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               625-802
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               630-787
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 134
               

               Conread position:
               635-801
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 127
               

               Conread position:
               635-802
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               644-795
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               650-801
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               658-801
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               32, 85
               
Show alignments to all cow chromosomes.