Cow genome map


           Conread name:
           Tra1-TCH01F040078
        

               Conread position:
               516-787
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               516-802
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               524-801
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               527-801
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 6
               

               Conread position:
               530-801
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               14, 216
               

               Conread position:
               538-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               538-802
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               6, 108
               

               Conread position:
               540-786
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 134
               

               Conread position:
               540-787
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               9, 122
               

               Conread position:
               540-789
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 51
               

               Conread position:
               540-789
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-792
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 28
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               540-799
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               153, 32
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               11, 100
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               12, 123
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 112
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               540-802
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               541-798
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 206
               

               Conread position:
               541-800
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 222
               

               Conread position:
               541-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               541-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               13, 19
               

               Conread position:
               541-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               541-801
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 14
               

               Conread position:
               542-730
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               542-790
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               542-798
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 126
               

               Conread position:
               544-801
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               545-801
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               549-801
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               155, 101
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               137, 76
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               135, 37
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               131, 41
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               137, 19
               

               Conread position:
               560-801
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               569-801
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               46, 84
               

               Conread position:
               572-801
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               574-799
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               609-801
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               102, 65
               

               Conread position:
               613-801
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               620-801
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               625-801
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               630-801
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               636-790
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               636-801
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 24
               
Show alignments to all cow chromosomes.