Cow genome map


           Conread name:
           Tra1-TCH01F040078
        

               Conread position:
               519-795
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               520-801
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               527-789
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               527-798
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 249
               

               Conread position:
               527-801
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               17, 6
               

               Conread position:
               530-786
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               530-800
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               12, 111
               

               Conread position:
               530-801
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               539-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               540-768
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-774
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-789
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               540-789
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               14, 100
               

               Conread position:
               540-799
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 228
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 111
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               14, 209
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               147, 10
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 48
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 204
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               540-802
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 103
               

               Conread position:
               540-802
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               542-793
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 148
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 221
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               12, 108
               

               Conread position:
               546-800
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               550-789
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               550-792
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               550-795
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               141, 35
               

               Conread position:
               551-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               553-789
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               134, 201
               

               Conread position:
               559-786
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               560-801
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               560-801
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               133, 30
               

               Conread position:
               572-801
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               115, 76
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               96, 111
               

               Conread position:
               593-792
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               593-794
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               604-802
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               610-792
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               74, 8
               

               Conread position:
               618-787
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 51
               

               Conread position:
               635-795
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 126
               

               Conread position:
               637-798
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               637-801
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               50, 124
               

               Conread position:
               652-796
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.