Cow genome map
| Conread name: | Tra1-TCH01F040078 |
| Conread position: | 519-795 |
| Cow position: | chr26:1620872-1621145 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 520-801 |
| Cow position: | chr26:25393005-25393292 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 527-789 |
| Cow position: | chr26:6429808-6430075 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 527-798 |
| Cow position: | chr26:9694572-9694296 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 249 |
| Conread position: | 527-801 |
| Cow position: | chr26:9835692-9835975 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 17, 6 |
| Conread position: | 530-786 |
| Cow position: | chr26:5679756-5680021 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 530-800 |
| Cow position: | chr26:9100754-9100491 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 12, 111 |
| Conread position: | 530-801 |
| Cow position: | chr26:23590921-23591199 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 12, 78 |
| Conread position: | 539-801 |
| Cow position: | chr26:29433468-29433736 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 540-768 |
| Cow position: | chr26:9558643-9558409 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-774 |
| Cow position: | chr26:3157352-3157592 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-789 |
| Cow position: | chr26:12662495-12662250 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 540-789 |
| Cow position: | chr26:26238239-26238491 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 540-798 |
| Cow position: | chr26:15199265-15199528 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 14, 100 |
| Conread position: | 540-799 |
| Cow position: | chr26:23889649-23889909 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 228 |
| Conread position: | 540-801 |
| Cow position: | chr26:386917-387184 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:1088421-1088681 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 14, 167 |
| Conread position: | 540-801 |
| Cow position: | chr26:1346757-1346490 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:2201767-2202032 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 540-801 |
| Cow position: | chr26:3186996-3187260 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 540-801 |
| Cow position: | chr26:3564802-3564535 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:4729087-4728821 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:6843983-6843716 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:7559379-7559112 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:8084063-8084330 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:12585301-12585034 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:13183547-13183814 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:13806790-13806525 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 14, 209 |
| Conread position: | 540-801 |
| Cow position: | chr26:14488018-14487757 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 147, 10 |
| Conread position: | 540-801 |
| Cow position: | chr26:15145731-15145998 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:17182320-17182565 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 540-801 |
| Cow position: | chr26:17429238-17428971 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:18857357-18857619 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:22691627-22691890 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 204 |
| Conread position: | 540-801 |
| Cow position: | chr26:22831799-22831535 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 540-801 |
| Cow position: | chr26:26286096-26286364 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:30594392-30594125 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 540-801 |
| Cow position: | chr26:34015079-34015341 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 540-801 |
| Cow position: | chr26:35191310-35191044 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 540-802 |
| Cow position: | chr26:17393658-17393394 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 540-802 |
| Cow position: | chr26:20255866-20256128 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 542-793 |
| Cow position: | chr26:27987351-27987103 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 148 |
| Conread position: | 542-801 |
| Cow position: | chr26:1885251-1885514 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 542-801 |
| Cow position: | chr26:13773290-13773555 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 221 |
| Conread position: | 542-801 |
| Cow position: | chr26:20496775-20497031 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 12, 108 |
| Conread position: | 546-800 |
| Cow position: | chr26:20218498-20218746 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 550-789 |
| Cow position: | chr26:16781422-16781667 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 550-792 |
| Cow position: | chr26:3230716-3230961 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 550-795 |
| Cow position: | chr26:10490492-10490737 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 137, 57 |
| Conread position: | 550-801 |
| Cow position: | chr26:6038439-6038184 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 141, 35 |
| Conread position: | 551-801 |
| Cow position: | chr26:17288059-17288315 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 553-789 |
| Cow position: | chr26:19795304-19795545 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 134, 201 |
| Conread position: | 559-786 |
| Cow position: | chr26:17169087-17169319 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 560-801 |
| Cow position: | chr26:30725660-30725413 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 560-801 |
| Cow position: | chr26:30786187-30786431 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 572-801 |
| Cow position: | chr26:2670547-2670316 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 115, 76 |
| Conread position: | 591-801 |
| Cow position: | chr26:3556822-3556614 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 96, 111 |
| Conread position: | 593-792 |
| Cow position: | chr26:11362390-11362197 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 63 |
| Conread position: | 593-794 |
| Cow position: | chr26:21350788-21350998 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 604-802 |
| Cow position: | chr26:8810159-8810359 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 610-792 |
| Cow position: | chr26:614882-614701 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 618-787 |
| Cow position: | chr26:8352057-8352228 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 635-795 |
| Cow position: | chr26:18934012-18933845 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 126 |
| Conread position: | 637-798 |
| Cow position: | chr26:6098229-6098063 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 637-801 |
| Cow position: | chr26:16719809-16719980 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 124 |
| Conread position: | 652-796 |
| Cow position: | chr26:3756554-3756703 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.