Cow genome map


           Conread name:
           Tra1-TCH01F040078
        

               Conread position:
               516-801
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               528-795
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               530-795
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               535-792
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               538-801
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 98
               

               Conread position:
               538-801
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               540-782
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               540-786
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-792
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               14, 118
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 134
               

               Conread position:
               540-795
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 51
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               540-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               540-799
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               21, 111
               

               Conread position:
               540-799
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               14, 226
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 205
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 30
               

               Conread position:
               540-801
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 227
               

               Conread position:
               540-802
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               541-795
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               541-798
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 9
               

               Conread position:
               542-715
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 129
               

               Conread position:
               542-795
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               542-798
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               542-798
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               15, 118
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               145, 13
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               12, 129
               

               Conread position:
               542-801
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               12, 132
               

               Conread position:
               543-776
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               544-799
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               545-799
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               142, 25
               

               Conread position:
               550-786
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               135, 48
               

               Conread position:
               550-789
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               157, 55
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 19
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               135, 29
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 187
               

               Conread position:
               550-801
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               137, 94
               

               Conread position:
               551-794
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               566-801
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               121, 35
               

               Conread position:
               573-799
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               591-789
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               591-793
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               99, 59
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               591-801
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               598-786
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 167
               

               Conread position:
               613-802
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               620-801
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 150
               

               Conread position:
               624-798
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               629-799
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               630-799
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               633-801
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 110
               

               Conread position:
               635-801
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               647-801
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 90
               

               Conread position:
               650-801
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               664-801
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               23, 0
               
Show alignments to all cow chromosomes.