Cow genome map

Conread name: Tra1-TCH01F040078

Conread position: 520-801
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 40

Conread position: 527-798
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 53

Conread position: 528-801
Cow position:
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 529-801
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 180

Conread position: 530-801
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 530-801
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 56

Conread position: 536-795
Cow position:
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 7, 150

Conread position: 537-801
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 153, 86

Conread position: 539-801
Cow position:
Alignm length: 270
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 540-774
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 115

Conread position: 540-788
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-792
Cow position:
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 540-792
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 540-792
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 51

Conread position: 540-793
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 100

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 250

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 30

Conread position: 540-798
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 47

Conread position: 540-798
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-798
Cow position:
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 230

Conread position: 540-798
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 30

Conread position: 540-799
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 142

Conread position: 540-801
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 14, 30

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 93

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 14, 86

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 15, 105

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 30

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 117

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 75

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 77

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 55

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 14, 48

Conread position: 540-801
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 51

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 86

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 40

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 241

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 111

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 21, 15

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 540-802
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 111

Conread position: 540-802
Cow position:
Alignm length: 270
Alignm identity: 197
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 9, 33

Conread position: 540-802
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 540-803
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 30

Conread position: 541-792
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 541-801
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 50

Conread position: 542-789
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 542-795
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 49

Conread position: 542-795
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 9, 63

Conread position: 542-801
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 542-801
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 542-801
Cow position:
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 542-801
Cow position:
Alignm length: 265
Alignm identity: 199
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 145, 28

Conread position: 542-801
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 66

Conread position: 542-801
Cow position:
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 543-750
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 63

Conread position: 545-801
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 98, 25

Conread position: 545-801
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 16, 171

Conread position: 549-781
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 138, 226

Conread position: 549-801
Cow position:
Alignm length: 258
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 38

Conread position: 550-785
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 101, 212

Conread position: 550-786
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 137, 0

Conread position: 550-787
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 140, 185

Conread position: 550-795
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 137, 0

Conread position: 550-801
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 101, 69

Conread position: 550-801
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 137, 84

Conread position: 550-801
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 550-801
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 137, 78

Conread position: 550-801
Cow position:
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 0

Conread position: 550-803
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 137, 84

Conread position: 586-801
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 39

Conread position: 591-793
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 120, 165

Conread position: 591-795
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 108, 87

Conread position: 591-798
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 591-801
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 99, 0

Conread position: 591-801
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 120, 99

Conread position: 591-801
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 16

Conread position: 601-801
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 86, 49

Conread position: 613-795
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 620-795
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 621-782
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 7

Conread position: 627-801
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 630-799
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 635-801
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 125

Conread position: 636-801
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 636-802
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 53, 19

Conread position: 640-801
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 14

Conread position: 644-801
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 645-801
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 647-801
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 651-801
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 686-804
Cow position:
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 698-801
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 34

Show alignments to all cow chromosomes.