Cow genome map

Conread name: Tra1-TCH01F040078

Conread position: 508-801
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 15

Conread position: 526-801
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 155, 109

Conread position: 537-801
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 41

Conread position: 539-802
Cow position:
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 30

Conread position: 540-755
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 540-779
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 14, 0

Conread position: 540-787
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 171, 0

Conread position: 540-789
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 147, 10

Conread position: 540-789
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-789
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-789
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 30

Conread position: 540-789
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 30

Conread position: 540-792
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-792
Cow position:
Alignm length: 259
Alignm identity: 191
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-793
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 540-795
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-795
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 111

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 77

Conread position: 540-795
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-798
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 30

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 135

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 14, 105

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 30

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 30

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 30

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 68

Conread position: 540-801
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 12, 0

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 14, 135

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 167, 104

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 275
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 55

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 106

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 110

Conread position: 540-801
Cow position:
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 103

Conread position: 540-801
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 40

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 540-801
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 30

Conread position: 540-801
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 540-802
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 0

Conread position: 540-802
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 14, 109

Conread position: 540-802
Cow position:
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 541-801
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 189

Conread position: 541-801
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 29

Conread position: 542-777
Cow position:
Alignm length: 242
Alignm identity: 180
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 29, 11

Conread position: 542-781
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 49

Conread position: 542-787
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 12, 90

Conread position: 542-792
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 10, 49

Conread position: 542-801
Cow position:
Alignm length: 267
Alignm identity: 191
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 73

Conread position: 542-801
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 542-801
Cow position:
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 46

Conread position: 542-802
Cow position:
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 73

Conread position: 542-803
Cow position:
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 221

Conread position: 543-801
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 7

Conread position: 544-801
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 10, 96

Conread position: 549-801
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 550-789
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 40

Conread position: 550-795
Cow position:
Alignm length: 247
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 144

Conread position: 550-795
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 137, 54

Conread position: 550-799
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 9

Conread position: 550-801
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 550-801
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 550-801
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 143, 93

Conread position: 550-801
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 90, 77

Conread position: 550-801
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 123, 137

Conread position: 550-801
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 137, 0

Conread position: 551-795
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 31, 209

Conread position: 552-799
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 88, 48

Conread position: 560-801
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 127, 0

Conread position: 560-801
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 133, 0

Conread position: 560-802
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 121, 9

Conread position: 560-803
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 172

Conread position: 561-785
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 89

Conread position: 562-798
Cow position:
Alignm length: 239
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 103

Conread position: 563-801
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 132, 64

Conread position: 572-782
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 115, 0

Conread position: 582-799
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 105, 153

Conread position: 591-789
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 93, 0

Conread position: 591-792
Cow position:
Alignm length: 206
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 96, 59

Conread position: 591-795
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 96, 37

Conread position: 598-801
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 51

Conread position: 601-801
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 21

Conread position: 605-799
Cow position:
Alignm length: 200
Alignm identity: 154
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 85, 38

Conread position: 607-799
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 80, 99

Conread position: 615-802
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 616-801
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 620-801
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 621-801
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 149

Conread position: 629-798
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 22

Conread position: 629-801
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 634-789
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 635-792
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 635-801
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 645-801
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 645-803
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 16

Conread position: 661-801
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.