Cow genome map


           Conread name:
           Tra1-TCH01G020096
        

               Conread position:
               4-315
               

               Cow position:
               chr15:526627-526937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               5-129
               

               Cow position:
               chr15:6173845-6173968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               6-161
               

               Cow position:
               chr15:47550952-47550799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               12-162
               

               Cow position:
               chr15:33700993-33700845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               47-281
               

               Cow position:
               chr15:33154684-33154920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               47-308
               

               Cow position:
               chr15:28978724-28978995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               99, 56
               

               Conread position:
               47-351
               

               Cow position:
               chr15:29549015-29548700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               52-281
               

               Cow position:
               chr15:15373923-15374162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               10, 14
               

               Conread position:
               122-322
               

               Cow position:
               chr15:6174178-6174378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               86, 32
               

               Conread position:
               442-678
               

               Cow position:
               chr15:6184577-6184806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               456-682
               

               Cow position:
               chr15:6174398-6174621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               516-648
               

               Cow position:
               chr15:527389-527520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 98
               
Show alignments to all cow chromosomes.