Cow genome map


           Conread name:
           Tra1-TCH01G020096
        

               Conread position:
               4-117
               

               Cow position:
               chr17:25742924-25743036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               4-351
               

               Cow position:
               chr17:2806091-2805744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 46
               

               Conread position:
               11-438
               

               Cow position:
               chr17:31602565-31602126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 16
               

               Conread position:
               15-161
               

               Cow position:
               chr17:29040328-29040470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               47-308
               

               Cow position:
               chr17:4189171-4188898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               52-390
               

               Cow position:
               chr17:26096502-26096152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               68-267
               

               Cow position:
               chr17:20894440-20894230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 77
               

               Conread position:
               431-653
               

               Cow position:
               chr17:31601818-31601601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               456-681
               

               Cow position:
               chr17:2805746-2805540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               545-675
               

               Cow position:
               chr17:24983418-24983288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.