• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Tra1-TCH01G050016
        

               
Conread position:
               
1-128
               

               
Cow position:
               
chr10:52881624-52881750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr10:52120731-52120605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr10:37442302-37442162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr10:21015993-21016142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr10:21923526-21923675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
140, 44
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr10:42123599-42123749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr10:15750789-15750639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr10:2202127-2202286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr10:38241077-38240917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr10:2538090-2537926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr10:4164264-4164095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr10:60237099-60237266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr10:11463672-11463850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr10:42892972-42893148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr10:48513087-48513273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
178, 131
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr10:4184190-4183996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 184
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr10:36285498-36285301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 140
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr10:12486259-12486062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr10:24375543-24375342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr10:24781183-24780979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
187, 57
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr10:25149893-25149688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr10:41254576-41254773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr10:45871509-45871302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr10:17836946-17836732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr10:24276737-24276949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr10:11576763-11576547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr10:46493000-46493225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr10:47412109-47412339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
183, 45
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr10:45379010-45379242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
152, 54
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr10:2853645-2853885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr10:37415784-37415546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr10:13163454-13163687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr10:22396250-22396008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr10:29252162-29251907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
176, 138
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr10:37668161-37668416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr10:29919844-29920089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr10:50183049-50183304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr10:64042079-64041826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr10:23576541-23576284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr10:24560993-24561246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
180, 57
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr10:40163939-40164190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
233, 106
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr10:48316952-48317216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr10:52029620-52029362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
139, 187
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr10:65071306-65071049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr10:60960929-60960676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr10:5889768-5890036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 67
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr10:42312897-42312642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 45
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr10:52113675-52113931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr10:57059287-57059547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
182, 7
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr10:38133489-38133750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 44
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr10:41255979-41255721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr10:45371051-45370791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
182, 138
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:1088024-1087752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 141
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:1423825-1423564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:2449345-2449084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:5543254-5543518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 60
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:6642883-6642613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:10751994-10752248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:11009404-11009158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:12315151-12314901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:16598683-16598421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:23912509-23912764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:24753141-24752890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
183, 59
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:25699644-25699398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:34430231-34430482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:34554097-34554356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:37444223-37444484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 153
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:37529270-37529537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:38014361-38014105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:42745912-42745645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
135, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:43287874-43288137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:43508985-43508731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:49038579-49038292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:49045840-49045576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
141, 187
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:53084168-53083897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:56080177-56080441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 59
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:56733028-56732779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr10:66127853-66127589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
135, 40
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr10:2462491-2462747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr10:50359911-50359642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr10:57461351-57461093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr10:17073370-17073626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
181, 45
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr10:31374094-31374380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr10:35802377-35802643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
182, 48
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr10:37235558-37235825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
169, 31
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr10:14947256-14946987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr10:27749667-27749395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
182, 45
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr10:35752967-35753240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr10:57457330-57457052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 54
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr10:68829290-68829546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr10:21037303-21037029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr10:9798199-9798476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 140
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr10:15318879-15318597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 54
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr10:21082375-21082107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr10:23936475-23936195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 51
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr10:30441052-30441332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr10:30523068-30523345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr10:35767090-35767367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr10:53248006-53248297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 179
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr10:60032575-60032864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
93, 245
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr10:13391053-13391347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr10:24732302-24731970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr10:39268590-39268256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
169, 53
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr10:31791265-31791608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 11
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr10:55122801-55122435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr10:59675260-59675634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
131, 44
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr10:33891089-33891472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr10:34906707-34906317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
136, 88
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr10:24871159-24870760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr10:50533870-50534271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr10:14817167-14817564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 19
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr10:16093208-16092803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr10:65423909-65424313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr10:65748944-65748543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
271, 57
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr10:17176030-17175617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 54
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr10:51306337-51305909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr10:35902961-35903365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr10:23886465-23886867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 51
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr10:35862233-35862670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr10:51944358-51943920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 141
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr10:52569586-52569145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr10:16645192-16645645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 399
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr10:31527969-31527542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 32
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr10:8923274-8922827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 138
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr10:15817796-15818245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr10:28395307-28395738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr10:6489866-6489424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr10:19895393-19894941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr10:34655116-34655581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr10:10468976-10468502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 71
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr10:2613363-2612905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 138
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr10:8093322-8093797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr10:40107099-40106636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr10:24022287-24022766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:2849344-2848870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 57
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:2974092-2974555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:9288046-9287586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 52
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:12392614-12393079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 57
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:13311730-13311244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:19372342-19372804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 57
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:20372130-20372601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 54
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:21462241-21461754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 206
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:22509185-22509667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:24312892-24313349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:25342593-25342103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:26209253-26209731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:31005021-31005530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:31466741-31466268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 57
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:37818559-37819045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:39875159-39875614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 29
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:41626590-41626120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 114
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:53336410-53336886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr10:59164103-59164569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 43
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr10:28105085-28105550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 139
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr10:20391445-20391642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
108, 104
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr10:35778907-35779110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
171, 44
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr10:6365478-6365258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr10:28840949-28840719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr10:22341569-22341308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 142
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr10:59151871-59152130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr10:15115607-15115348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr10:22049254-22048984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr10:37014627-37014371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
176, 92
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr10:39228141-39227889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr10:59663979-59664232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr10:54962729-54962989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 165
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr10:1976320-1976594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr10:24132826-24133097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 44
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr10:67626999-67627265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr10:56475459-56475180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 51
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr10:15462485-15462208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
250, 137
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr10:35911753-35912040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr10:36896396-36896035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
179, 130
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr10:31779275-31779659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 149
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr10:20095754-20095326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr10:31362220-31362645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 32
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr10:21657420-21656962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 138
               

               
Conread position:
               
2-463
               

               
Cow position:
               
chr10:22520168-22520637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
168, 132
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr10:43487706-43487232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 63
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr10:19549495-19549670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr10:28222915-28222721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr10:37765020-37764810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
45, 100
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr10:51069054-51068850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 42
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr10:37534595-37534400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
138, 100
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr10:43531253-43531027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr10:18153834-18154072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr10:9774342-9774081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr10:8277540-8277274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr10:17844759-17844495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr10:37512252-37512522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr10:21708909-21709179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
3-429
               

               
Cow position:
               
chr10:54948145-54948577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
3-433
               

               
Cow position:
               
chr10:63940766-63940327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
3-450
               

               
Cow position:
               
chr10:11966851-11967318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr10:13050302-13050772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr10:22527909-22528385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 74
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr10:33215796-33215312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 137
               

               
Conread position:
               
3-470
               

               
Cow position:
               
chr10:20399194-20398715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
4-179
               

               
Cow position:
               
chr10:64839016-64839196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr10:39303856-39304062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 136
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr10:52175616-52175408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr10:20997293-20997544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
151, 42
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr10:40906309-40906045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr10:40420852-40421210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr10:45658136-45657961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr10:35653661-35653464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr10:48408400-48408594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr10:33732876-33733076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
5-219
               

               
Cow position:
               
chr10:42115250-42115027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 209
               

               
Conread position:
               
5-230
               

               
Cow position:
               
chr10:28152388-28152617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
176, 69
               

               
Conread position:
               
5-234
               

               
Cow position:
               
chr10:18229725-18229960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr10:36490011-36489762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
5-262
               

               
Cow position:
               
chr10:3985419-3985181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr10:8170240-8169991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr10:13586694-13586447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr10:40147643-40147902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr10:2304392-2304644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
174, 41
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr10:6173348-6173089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
176, 41
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr10:7304567-7304304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr10:51313991-51313721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr10:54848772-54848510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr10:64182438-64182183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
170, 13
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr10:14975804-14976066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
172, 25
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr10:10720682-10720965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 39
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr10:19394599-19394867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr10:24745115-24744839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr10:54477093-54476823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
171, 38
               

               
Conread position:
               
5-316
               

               
Cow position:
               
chr10:42637223-42636893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
5-433
               

               
Cow position:
               
chr10:19678864-19678418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
5-450
               

               
Cow position:
               
chr10:22616649-22617112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr10:20132538-20133015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr10:62286547-62286068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 136
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr10:15868242-15867759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 147
               

               
Conread position:
               
6-140
               

               
Cow position:
               
chr10:331370-331235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
6-151
               

               
Cow position:
               
chr10:16986321-16986177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
6-160
               

               
Cow position:
               
chr10:48500086-48499943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-182
               

               
Cow position:
               
chr10:39140172-39140001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 91
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr10:37173458-37173660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr10:55930187-55929980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr10:17983173-17982919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr10:31266343-31266593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr10:50039386-50039148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
233, 46
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr10:19655895-19655641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
172, 59
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr10:29166269-29166011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr10:29188366-29188628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr10:37287182-37287445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr10:54799606-54799350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr10:66211301-66211565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
131, 66
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr10:48388281-48388543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
175, 49
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr10:64876509-64876230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr10:20505535-20505253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
43, 243
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr10:34607551-34607269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 134
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr10:64437918-64437638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr10:61839586-61839188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 40
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr10:5607634-5607234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr10:24096383-24096799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr10:28721775-28721315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
6-463
               

               
Cow position:
               
chr10:36247789-36247320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr10:48462350-48462825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 46
               

               
Conread position:
               
7-182
               

               
Cow position:
               
chr10:62642983-62642808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
7-257
               

               
Cow position:
               
chr10:38370468-38370723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr10:32093794-32093539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
7-262
               

               
Cow position:
               
chr10:65000119-65000380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr10:37528616-37528873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 39
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr10:47165857-47165610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr10:40924529-40924249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
146, 37
               

               
Conread position:
               
7-411
               

               
Cow position:
               
chr10:6407942-6407523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 38
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr10:9083285-9082829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr10:40737983-40737521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 39
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr10:62956305-62956087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
8-233
               

               
Cow position:
               
chr10:25882404-25882189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
173, 22
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr10:58718638-58718378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
11-177
               

               
Cow position:
               
chr10:45965484-45965322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr10:45476232-45476434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
166, 41
               

               
Conread position:
               
11-213
               

               
Cow position:
               
chr10:31000603-31000818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
11-218
               

               
Cow position:
               
chr10:66194318-66194526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
11-259
               

               
Cow position:
               
chr10:15294352-15294104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr10:721288-721032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr10:6986432-6986184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr10:63276378-63276123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 44
               

               
Conread position:
               
11-275
               

               
Cow position:
               
chr10:32417337-32417087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
11-285
               

               
Cow position:
               
chr10:19104187-19104471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
11-350
               

               
Cow position:
               
chr10:64878005-64878364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
11-353
               

               
Cow position:
               
chr10:58235239-58234895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
11-392
               

               
Cow position:
               
chr10:35904841-35905244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
11-428
               

               
Cow position:
               
chr10:46227077-46226667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr10:32583896-32583428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 20
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chr10:32834802-32834634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chr10:4109572-4109400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr10:668865-668617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
169, 50
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr10:31812450-31812683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr10:29102360-29102592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr10:47711353-47711098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
12-285
               

               
Cow position:
               
chr10:15293249-15292983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
169, 40
               

               
Conread position:
               
12-289
               

               
Cow position:
               
chr10:18042163-18041893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
12-376
               

               
Cow position:
               
chr10:14850202-14849837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
260, 33
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr10:14098339-14098717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
160, 41
               

               
Conread position:
               
12-434
               

               
Cow position:
               
chr10:22321506-22321073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
13-253
               

               
Cow position:
               
chr10:50200694-50200456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
13-264
               

               
Cow position:
               
chr10:39398534-39398786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
140, 32
               

               
Conread position:
               
13-264
               

               
Cow position:
               
chr10:63239607-63239352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr10:11080946-11080684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
164, 126
               

               
Conread position:
               
13-340
               

               
Cow position:
               
chr10:21422174-21422516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
51, 117
               

               
Conread position:
               
13-371
               

               
Cow position:
               
chr10:64961287-64960911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
164, 31
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr10:54469411-54469818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 59
               

               
Conread position:
               
13-446
               

               
Cow position:
               
chr10:6516199-6516659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 33
               

               
Conread position:
               
13-463
               

               
Cow position:
               
chr10:24971628-24972080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 126
               

               
Conread position:
               
13-465
               

               
Cow position:
               
chr10:3998888-3998428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 126
               

               
Conread position:
               
14-403
               

               
Cow position:
               
chr10:61588281-61588684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
15-152
               

               
Cow position:
               
chr10:29090711-29090847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
15-218
               

               
Cow position:
               
chr10:44730499-44730703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
166, 42
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr10:23447661-23447911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 37
               

               
Conread position:
               
16-264
               

               
Cow position:
               
chr10:23506508-23506753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
16-285
               

               
Cow position:
               
chr10:19402918-19402647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 239
               

               
Conread position:
               
16-285
               

               
Cow position:
               
chr10:35731539-35731814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
16-390
               

               
Cow position:
               
chr10:31400913-31401311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
17-391
               

               
Cow position:
               
chr10:24548237-24547846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 122
               

               
Conread position:
               
19-256
               

               
Cow position:
               
chr10:35791909-35791673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
20-241
               

               
Cow position:
               
chr10:37709056-37709282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
20-263
               

               
Cow position:
               
chr10:43438851-43438603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
20-354
               

               
Cow position:
               
chr10:58557171-58556824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
164, 26
               

               
Conread position:
               
21-310
               

               
Cow position:
               
chr10:62219807-62219513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
29, 223
               

               
Conread position:
               
21-319
               

               
Cow position:
               
chr10:25936216-25935918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
22-264
               

               
Cow position:
               
chr10:29360883-29360640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
22-273
               

               
Cow position:
               
chr10:25045715-25045959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
22-446
               

               
Cow position:
               
chr10:54730987-54730557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
25-183
               

               
Cow position:
               
chr10:1201907-1201750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
25-285
               

               
Cow position:
               
chr10:24871861-24871599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
152, 114
               

               
Conread position:
               
26-276
               

               
Cow position:
               
chr10:48255249-48255503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 108
               

               
Conread position:
               
26-464
               

               
Cow position:
               
chr10:30360490-30360045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
28-354
               

               
Cow position:
               
chr10:57142248-57142595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
151, 54
               

               
Conread position:
               
28-465
               

               
Cow position:
               
chr10:30455880-30456335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr10:38513143-38512941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
152, 110
               

               
Conread position:
               
29-258
               

               
Cow position:
               
chr10:1719558-1719789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 42
               

               
Conread position:
               
29-262
               

               
Cow position:
               
chr10:49569171-49568938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
29-270
               

               
Cow position:
               
chr10:59675639-59675880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
29-284
               

               
Cow position:
               
chr10:15871909-15872150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
30-261
               

               
Cow position:
               
chr10:49456123-49456341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
32-390
               

               
Cow position:
               
chr10:8077179-8077559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr10:50134846-50135006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
36-262
               

               
Cow position:
               
chr10:47543042-47542825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
36-285
               

               
Cow position:
               
chr10:888884-888638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
36-446
               

               
Cow position:
               
chr10:29279403-29278992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 93
               

               
Conread position:
               
37-264
               

               
Cow position:
               
chr10:28038975-28039199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 103
               

               
Conread position:
               
37-285
               

               
Cow position:
               
chr10:24786067-24785816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
37-464
               

               
Cow position:
               
chr10:58690852-58690446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
411, 45
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr10:43450954-43451369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
40-267
               

               
Cow position:
               
chr10:10148614-10148379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 101
               

               
Conread position:
               
40-464
               

               
Cow position:
               
chr10:50332545-50332108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
41-250
               

               
Cow position:
               
chr10:33194988-33194767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 99
               

               
Conread position:
               
41-264
               

               
Cow position:
               
chr10:22472270-22472048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
139, 41
               

               
Conread position:
               
42-264
               

               
Cow position:
               
chr10:33867435-33867644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
42-373
               

               
Cow position:
               
chr10:67716940-67716592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
43-464
               

               
Cow position:
               
chr10:32503404-32502988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
45-236
               

               
Cow position:
               
chr10:38223648-38223840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
46-218
               

               
Cow position:
               
chr10:30787662-30787830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
46-263
               

               
Cow position:
               
chr10:54936158-54936379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
55-179
               

               
Cow position:
               
chr10:4484610-4484486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-193
               

               
Cow position:
               
chr10:68927096-68926961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
55-207
               

               
Cow position:
               
chr10:62293943-62293783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr10:8923881-8923667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr10:57033848-57034058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
55-269
               

               
Cow position:
               
chr10:48259289-48259503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
55-446
               

               
Cow position:
               
chr10:7737744-7737324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 393
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr10:46801063-46801488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
55-464
               

               
Cow position:
               
chr10:10048627-10048206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 326
               

               
Conread position:
               
55-464
               

               
Cow position:
               
chr10:48377698-48378116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
55-464
               

               
Cow position:
               
chr10:57016204-57016623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr10:29628009-29628218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
56-277
               

               
Cow position:
               
chr10:44817726-44817502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
56-285
               

               
Cow position:
               
chr10:29211900-29211669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
56-361
               

               
Cow position:
               
chr10:47091616-47091932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 224
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr10:56835223-56834794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr10:60936887-60936466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 113
               

               
Conread position:
               
57-256
               

               
Cow position:
               
chr10:67020567-67020367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
57-263
               

               
Cow position:
               
chr10:67443165-67443372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
57-264
               

               
Cow position:
               
chr10:20897245-20897035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
57-264
               

               
Cow position:
               
chr10:21447965-21448161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
57-264
               

               
Cow position:
               
chr10:61305214-61305014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
57-369
               

               
Cow position:
               
chr10:35796387-35796696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
228, 50
               

               
Conread position:
               
57-382
               

               
Cow position:
               
chr10:65132900-65132555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
57-386
               

               
Cow position:
               
chr10:50016072-50016397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
215, 33
               

               
Conread position:
               
57-464
               

               
Cow position:
               
chr10:77324-76912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 25
               

               
Conread position:
               
57-464
               

               
Cow position:
               
chr10:6530137-6529717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 82
               

               
Conread position:
               
57-464
               

               
Cow position:
               
chr10:9445073-9445486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
57-464
               

               
Cow position:
               
chr10:20447035-20446620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 82
               

               
Conread position:
               
57-474
               

               
Cow position:
               
chr10:27362430-27361993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr10:24307975-24308378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 71
               

               
Conread position:
               
59-233
               

               
Cow position:
               
chr10:16414647-16414823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 76
               

               
Conread position:
               
59-258
               

               
Cow position:
               
chr10:318756-318956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
59-259
               

               
Cow position:
               
chr10:5502965-5502761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
59-264
               

               
Cow position:
               
chr10:34661374-34661584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
59-264
               

               
Cow position:
               
chr10:53934796-53935007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 174
               

               
Conread position:
               
59-266
               

               
Cow position:
               
chr10:51779099-51779299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 56
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr10:41397421-41397191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
60-465
               

               
Cow position:
               
chr10:1488775-1488375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
220, 15
               

               
Conread position:
               
62-262
               

               
Cow position:
               
chr10:22567506-22567703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
63-282
               

               
Cow position:
               
chr10:55097754-55097967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
64-235
               

               
Cow position:
               
chr10:60722215-60722383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
65-285
               

               
Cow position:
               
chr10:69698917-69698695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 164
               

               
Conread position:
               
66-264
               

               
Cow position:
               
chr10:49169121-49169324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
115, 192
               

               
Conread position:
               
67-171
               

               
Cow position:
               
chr10:35856419-35856522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
67-285
               

               
Cow position:
               
chr10:35857124-35857343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
114, 72
               

               
Conread position:
               
68-281
               

               
Cow position:
               
chr10:59141360-59141141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
68-285
               

               
Cow position:
               
chr10:50390708-50390494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
68-340
               

               
Cow position:
               
chr10:16986168-16985877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
70-464
               

               
Cow position:
               
chr10:20506888-20506499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 139
               

               
Conread position:
               
70-464
               

               
Cow position:
               
chr10:47493275-47493692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 70
               

               
Conread position:
               
72-264
               

               
Cow position:
               
chr10:23376537-23376731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
72-456
               

               
Cow position:
               
chr10:48594153-48594543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
76-264
               

               
Cow position:
               
chr10:39646181-39646372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
76-464
               

               
Cow position:
               
chr10:32775029-32774632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 14
               

               
Conread position:
               
77-345
               

               
Cow position:
               
chr10:6345999-6345702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
77-460
               

               
Cow position:
               
chr10:11217535-11217135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 358
               

               
Conread position:
               
83-239
               

               
Cow position:
               
chr10:23500295-23500459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
85-450
               

               
Cow position:
               
chr10:5113503-5113117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 355
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr10:32928677-32928505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
87-464
               

               
Cow position:
               
chr10:55580353-55580738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
89-285
               

               
Cow position:
               
chr10:47159014-47158817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
89, 49
               

               
Conread position:
               
89-433
               

               
Cow position:
               
chr10:2708289-2707940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 208
               

               
Conread position:
               
90-258
               

               
Cow position:
               
chr10:9586610-9586772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 49
               

               
Conread position:
               
92-464
               

               
Cow position:
               
chr10:28836128-28835754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
180, 47
               

               
Conread position:
               
94-343
               

               
Cow position:
               
chr10:55733696-55733964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
96-264
               

               
Cow position:
               
chr10:35715807-35715978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
98-264
               

               
Cow position:
               
chr10:58935292-58935457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
98-342
               

               
Cow position:
               
chr10:4311089-4310827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
102-270
               

               
Cow position:
               
chr10:42230556-42230391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
104-460
               

               
Cow position:
               
chr10:54141786-54141406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
125-270
               

               
Cow position:
               
chr10:69998072-69998221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 14
               
Show alignments to all cow chromosomes.