Cow genome map
| Conread name: | Tra1-TCH01G050016 |
| Conread position: | 1-122 |
| Cow position: | chr12:10942267-10942146 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-137 |
| Cow position: | chr12:7882274-7882139 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 1-137 |
| Cow position: | chr12:38184574-38184443 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:4820935-4820794 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-145 |
| Cow position: | chr12:42174397-42174259 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-150 |
| Cow position: | chr12:9894762-9894616 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 135, 45 |
| Conread position: | 1-159 |
| Cow position: | chr12:44920015-44919859 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-175 |
| Cow position: | chr12:11587754-11587576 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 138, 62 |
| Conread position: | 1-180 |
| Cow position: | chr12:2670246-2670067 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-180 |
| Cow position: | chr12:37536510-37536685 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-182 |
| Cow position: | chr12:33976179-33976005 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-183 |
| Cow position: | chr12:29921805-29921976 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-196 |
| Cow position: | chr12:22540187-22539987 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 105 |
| Conread position: | 1-197 |
| Cow position: | chr12:33851341-33851140 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 1-202 |
| Cow position: | chr12:3060107-3060310 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 1-203 |
| Cow position: | chr12:3057044-3056840 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 1-203 |
| Cow position: | chr12:12030848-12031055 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-203 |
| Cow position: | chr12:15762931-15763131 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 135, 64 |
| Conread position: | 1-203 |
| Cow position: | chr12:31948095-31947902 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-207 |
| Cow position: | chr12:730956-731160 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-207 |
| Cow position: | chr12:12579053-12579250 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 172, 28 |
| Conread position: | 1-207 |
| Cow position: | chr12:25452467-25452667 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 74, 54 |
| Conread position: | 1-207 |
| Cow position: | chr12:28748922-28748709 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 136, 153 |
| Conread position: | 1-213 |
| Cow position: | chr12:4162383-4162602 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 109 |
| Conread position: | 1-215 |
| Cow position: | chr12:15163120-15162916 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 180, 45 |
| Conread position: | 1-218 |
| Cow position: | chr12:30476462-30476241 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 180, 51 |
| Conread position: | 1-218 |
| Cow position: | chr12:43582755-43582542 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 1-219 |
| Cow position: | chr12:13996044-13996272 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 130, 51 |
| Conread position: | 1-224 |
| Cow position: | chr12:23574743-23574528 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 181, 54 |
| Conread position: | 1-235 |
| Cow position: | chr12:23798081-23797850 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 180, 52 |
| Conread position: | 1-240 |
| Cow position: | chr12:43351812-43351582 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-241 |
| Cow position: | chr12:24107565-24107797 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 178, 51 |
| Conread position: | 1-254 |
| Cow position: | chr12:21393686-21393433 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 1-256 |
| Cow position: | chr12:17624845-17625092 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 134, 98 |
| Conread position: | 1-258 |
| Cow position: | chr12:30661970-30662226 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 143, 44 |
| Conread position: | 1-259 |
| Cow position: | chr12:34333090-34332829 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 143, 62 |
| Conread position: | 1-260 |
| Cow position: | chr12:44846366-44846115 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 19 |
| Conread position: | 1-262 |
| Cow position: | chr12:1773685-1773943 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 131, 54 |
| Conread position: | 1-262 |
| Cow position: | chr12:30590744-30590497 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-262 |
| Cow position: | chr12:32169521-32169255 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 152, 81 |
| Conread position: | 1-262 |
| Cow position: | chr12:34466024-34466281 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 1-263 |
| Cow position: | chr12:2711478-2711211 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 1-263 |
| Cow position: | chr12:37993752-37994006 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 182, 51 |
| Conread position: | 1-264 |
| Cow position: | chr12:1443762-1444030 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 1-264 |
| Cow position: | chr12:4866797-4866534 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 128, 64 |
| Conread position: | 1-264 |
| Cow position: | chr12:5906036-5905775 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 124 |
| Conread position: | 1-264 |
| Cow position: | chr12:9710228-9710486 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 64 |
| Conread position: | 1-264 |
| Cow position: | chr12:9914769-9914507 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 136, 45 |
| Conread position: | 1-264 |
| Cow position: | chr12:18518653-18518389 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 44, 109 |
| Conread position: | 1-264 |
| Cow position: | chr12:26782864-26782599 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 137, 81 |
| Conread position: | 1-264 |
| Cow position: | chr12:33458129-33457867 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 1-264 |
| Cow position: | chr12:35368622-35368361 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-264 |
| Cow position: | chr12:36012633-36012890 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 1-264 |
| Cow position: | chr12:41091513-41091247 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 1-265 |
| Cow position: | chr12:27562848-27563120 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 134, 15 |
| Conread position: | 1-267 |
| Cow position: | chr12:18388310-18388567 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 180, 52 |
| Conread position: | 1-270 |
| Cow position: | chr12:6241299-6241021 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 49, 87 |
| Conread position: | 1-270 |
| Cow position: | chr12:20479351-20479600 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 131, 51 |
| Conread position: | 1-270 |
| Cow position: | chr12:35771041-35771321 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 134, 45 |
| Conread position: | 1-270 |
| Cow position: | chr12:41474069-41473807 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-274 |
| Cow position: | chr12:25320898-25320632 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 173, 10 |
| Conread position: | 1-283 |
| Cow position: | chr12:30805833-30805554 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 243, 43 |
| Conread position: | 1-343 |
| Cow position: | chr12:25561350-25560992 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 179, 45 |
| Conread position: | 1-355 |
| Cow position: | chr12:3568921-3568559 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 1-359 |
| Cow position: | chr12:30438220-30437856 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 271, 52 |
| Conread position: | 1-362 |
| Cow position: | chr12:31959866-31959496 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 152, 51 |
| Conread position: | 1-371 |
| Cow position: | chr12:3510540-3510187 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 50 |
| Conread position: | 1-376 |
| Cow position: | chr12:42181149-42181550 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 145 |
| Conread position: | 1-378 |
| Cow position: | chr12:42254647-42254247 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 11 |
| Conread position: | 1-384 |
| Cow position: | chr12:4116469-4116092 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 180, 45 |
| Conread position: | 1-388 |
| Cow position: | chr12:19508579-19508993 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-413 |
| Cow position: | chr12:21486559-21486146 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 1-418 |
| Cow position: | chr12:40910309-40910733 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 74 |
| Conread position: | 1-433 |
| Cow position: | chr12:7960603-7961030 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 277, 5 |
| Conread position: | 1-434 |
| Cow position: | chr12:3950365-3950805 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 45 |
| Conread position: | 1-434 |
| Cow position: | chr12:36500968-36501415 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 1-437 |
| Cow position: | chr12:42966980-42966528 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 1-446 |
| Cow position: | chr12:11583370-11582927 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 41 |
| Conread position: | 1-446 |
| Cow position: | chr12:42602263-42602717 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 44 |
| Conread position: | 1-464 |
| Cow position: | chr12:3039491-3039017 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 174 |
| Conread position: | 1-464 |
| Cow position: | chr12:11056855-11056394 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 45 |
| Conread position: | 1-464 |
| Cow position: | chr12:19691251-19691737 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 139 |
| Conread position: | 1-464 |
| Cow position: | chr12:27563397-27563882 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 74 |
| Conread position: | 2-183 |
| Cow position: | chr12:7299481-7299667 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 2-228 |
| Cow position: | chr12:24211392-24211170 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 179, 44 |
| Conread position: | 2-262 |
| Cow position: | chr12:17717048-17716803 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 2-264 |
| Cow position: | chr12:19866218-19865960 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 157, 50 |
| Conread position: | 2-264 |
| Cow position: | chr12:47804136-47803873 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 2-277 |
| Cow position: | chr12:40110361-40110094 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 180, 42 |
| Conread position: | 2-285 |
| Cow position: | chr12:37770856-37770568 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 2-285 |
| Cow position: | chr12:45820387-45820660 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 175, 110 |
| Conread position: | 2-384 |
| Cow position: | chr12:5631900-5632294 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 2-403 |
| Cow position: | chr12:6720306-6719885 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 2-434 |
| Cow position: | chr12:2512506-2512059 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 43 |
| Conread position: | 2-464 |
| Cow position: | chr12:18420943-18421424 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 88 |
| Conread position: | 3-202 |
| Cow position: | chr12:36544665-36544869 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 126 |
| Conread position: | 3-213 |
| Cow position: | chr12:29899451-29899668 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 138, 42 |
| Conread position: | 3-258 |
| Cow position: | chr12:34274442-34274188 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 150, 38 |
| Conread position: | 3-264 |
| Cow position: | chr12:6698754-6698498 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 149, 26 |
| Conread position: | 3-264 |
| Cow position: | chr12:15358312-15358046 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 174, 60 |
| Conread position: | 3-264 |
| Cow position: | chr12:22882034-22881770 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 84, 161 |
| Conread position: | 3-264 |
| Cow position: | chr12:26317443-26317177 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 3-264 |
| Cow position: | chr12:30170647-30170385 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 152, 48 |
| Conread position: | 3-464 |
| Cow position: | chr12:3071087-3070613 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 43 |
| Conread position: | 4-389 |
| Cow position: | chr12:34473641-34474026 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 4-463 |
| Cow position: | chr12:31429591-31430064 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 135 |
| Conread position: | 5-151 |
| Cow position: | chr12:23916822-23916675 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 5-153 |
| Cow position: | chr12:4719923-4719776 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 5-157 |
| Cow position: | chr12:15050640-15050791 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 5-180 |
| Cow position: | chr12:23855815-23855638 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 5-202 |
| Cow position: | chr12:30210459-30210258 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 5-262 |
| Cow position: | chr12:2286559-2286301 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 150, 39 |
| Conread position: | 5-262 |
| Cow position: | chr12:12682173-12682433 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 55, 34 |
| Conread position: | 5-264 |
| Cow position: | chr12:2241913-2242167 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 5-264 |
| Cow position: | chr12:7000627-7000871 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 5-264 |
| Cow position: | chr12:16851030-16851291 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 135 |
| Conread position: | 5-264 |
| Cow position: | chr12:19715060-19715309 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 129 |
| Conread position: | 5-267 |
| Cow position: | chr12:34429180-34429429 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 148, 41 |
| Conread position: | 5-270 |
| Cow position: | chr12:19664556-19664803 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 127, 28 |
| Conread position: | 5-276 |
| Cow position: | chr12:28582528-28582786 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 5-405 |
| Cow position: | chr12:29483910-29484326 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 5-413 |
| Cow position: | chr12:22047446-22047036 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 5-464 |
| Cow position: | chr12:15938287-15938749 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 5-483 |
| Cow position: | chr12:19869439-19868944 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 12 |
| Conread position: | 6-137 |
| Cow position: | chr12:17666278-17666146 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 6-137 |
| Cow position: | chr12:46692708-46692581 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 6-149 |
| Cow position: | chr12:20354951-20354804 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 6-165 |
| Cow position: | chr12:10491247-10491091 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 96 |
| Conread position: | 6-178 |
| Cow position: | chr12:30227255-30227422 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 6-195 |
| Cow position: | chr12:34533389-34533572 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 6-207 |
| Cow position: | chr12:25820455-25820658 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 6-208 |
| Cow position: | chr12:18021567-18021367 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 40 |
| Conread position: | 6-235 |
| Cow position: | chr12:35779950-35780180 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 176, 40 |
| Conread position: | 6-243 |
| Cow position: | chr12:4182716-4182957 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 176, 40 |
| Conread position: | 6-259 |
| Cow position: | chr12:12699789-12700052 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 135, 59 |
| Conread position: | 6-259 |
| Cow position: | chr12:29779939-29780179 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 128, 39 |
| Conread position: | 6-264 |
| Cow position: | chr12:6210183-6210439 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 40 |
| Conread position: | 6-269 |
| Cow position: | chr12:41214346-41214605 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 69, 77 |
| Conread position: | 6-270 |
| Cow position: | chr12:25456094-25455826 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 6-271 |
| Cow position: | chr12:19039635-19039900 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 6-277 |
| Cow position: | chr12:28650932-28650662 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 147, 244 |
| Conread position: | 6-285 |
| Cow position: | chr12:29995487-29995765 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 159, 40 |
| Conread position: | 6-285 |
| Cow position: | chr12:37481140-37481433 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 128, 40 |
| Conread position: | 6-364 |
| Cow position: | chr12:46714346-46713996 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 144, 40 |
| Conread position: | 6-419 |
| Cow position: | chr12:34385532-34385955 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 6-446 |
| Cow position: | chr12:7978015-7977572 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 6-450 |
| Cow position: | chr12:15173798-15173335 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 38 |
| Conread position: | 6-464 |
| Cow position: | chr12:18937381-18936900 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 385 |
| Conread position: | 6-464 |
| Cow position: | chr12:24440790-24440313 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 39 |
| Conread position: | 7-136 |
| Cow position: | chr12:15039002-15039129 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 7-182 |
| Cow position: | chr12:29945355-29945526 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 134, 44 |
| Conread position: | 7-264 |
| Cow position: | chr12:28257082-28257337 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 135, 38 |
| Conread position: | 7-365 |
| Cow position: | chr12:10895579-10895949 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 174, 74 |
| Conread position: | 7-368 |
| Cow position: | chr12:20326746-20326371 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 45 |
| Conread position: | 7-393 |
| Cow position: | chr12:7147662-7147252 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 336 |
| Conread position: | 8-255 |
| Cow position: | chr12:18943685-18943917 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 8-264 |
| Cow position: | chr12:36954408-36954657 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 8-340 |
| Cow position: | chr12:41581087-41580741 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 134, 38 |
| Conread position: | 10-264 |
| Cow position: | chr12:48415541-48415793 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 11-141 |
| Cow position: | chr12:12637213-12637343 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-143 |
| Cow position: | chr12:6102856-6102987 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 11-145 |
| Cow position: | chr12:4596432-4596303 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 11-151 |
| Cow position: | chr12:18420442-18420303 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 11-239 |
| Cow position: | chr12:18766003-18766238 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-243 |
| Cow position: | chr12:42282869-42283098 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 170, 30 |
| Conread position: | 11-263 |
| Cow position: | chr12:8868905-8869164 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 45, 35 |
| Conread position: | 11-264 |
| Cow position: | chr12:22617005-22617259 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 166, 41 |
| Conread position: | 11-270 |
| Cow position: | chr12:5714600-5714341 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 128 |
| Conread position: | 11-285 |
| Cow position: | chr12:32391818-32391542 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 35 |
| Conread position: | 11-290 |
| Cow position: | chr12:33323526-33323806 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 166, 42 |
| Conread position: | 11-390 |
| Cow position: | chr12:21246548-21246934 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 11-440 |
| Cow position: | chr12:19154644-19155082 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 12-239 |
| Cow position: | chr12:40028785-40029012 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 158 |
| Conread position: | 12-264 |
| Cow position: | chr12:2805080-2805324 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 202, 34 |
| Conread position: | 12-264 |
| Cow position: | chr12:6410766-6411010 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 12-264 |
| Cow position: | chr12:34007274-34007017 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 12-270 |
| Cow position: | chr12:8943255-8943508 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 24 |
| Conread position: | 12-270 |
| Cow position: | chr12:26223019-26223273 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 12-285 |
| Cow position: | chr12:46143791-46143518 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 34 |
| Conread position: | 12-368 |
| Cow position: | chr12:45814293-45814668 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 12-466 |
| Cow position: | chr12:9482338-9482779 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 33 |
| Conread position: | 13-250 |
| Cow position: | chr12:17702258-17702501 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 104, 113 |
| Conread position: | 13-264 |
| Cow position: | chr12:3056099-3055854 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 242, 5 |
| Conread position: | 13-414 |
| Cow position: | chr12:34673372-34673779 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 59 |
| Conread position: | 13-464 |
| Cow position: | chr12:5801009-5800533 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 15-207 |
| Cow position: | chr12:44559554-44559361 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 147, 31 |
| Conread position: | 16-190 |
| Cow position: | chr12:6121328-6121146 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 16-264 |
| Cow position: | chr12:20776956-20777211 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 148, 123 |
| Conread position: | 16-270 |
| Cow position: | chr12:6164057-6164317 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 35, 124 |
| Conread position: | 20-206 |
| Cow position: | chr12:3906435-3906244 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 163, 35 |
| Conread position: | 20-226 |
| Cow position: | chr12:38511875-38512086 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 209 |
| Conread position: | 20-430 |
| Cow position: | chr12:30919386-30918965 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 35, 117 |
| Conread position: | 21-243 |
| Cow position: | chr12:3994918-3994688 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 23-405 |
| Cow position: | chr12:6489030-6489413 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 249, 82 |
| Conread position: | 27-264 |
| Cow position: | chr12:29694092-29694319 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 109, 14 |
| Conread position: | 31-218 |
| Cow position: | chr12:35378151-35377963 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 146, 47 |
| Conread position: | 31-462 |
| Cow position: | chr12:17472274-17472712 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 89 |
| Conread position: | 36-265 |
| Cow position: | chr12:19697349-19697135 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 173, 67 |
| Conread position: | 36-361 |
| Cow position: | chr12:7919989-7919669 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 152, 39 |
| Conread position: | 39-259 |
| Cow position: | chr12:42160599-42160834 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 40-456 |
| Cow position: | chr12:47929154-47928725 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 294 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 46-355 |
| Cow position: | chr12:28010963-28011290 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 131, 22 |
| Conread position: | 47-267 |
| Cow position: | chr12:22260886-22261099 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 94 |
| Conread position: | 55-261 |
| Cow position: | chr12:12017806-12017597 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 55-343 |
| Cow position: | chr12:6226721-6227010 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 101 |
| Conread position: | 55-464 |
| Cow position: | chr12:9413854-9414266 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 98 |
| Conread position: | 56-180 |
| Cow position: | chr12:27639172-27639297 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 56-242 |
| Cow position: | chr12:5940275-5940083 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 56-243 |
| Cow position: | chr12:28804922-28804732 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 56-264 |
| Cow position: | chr12:9465536-9465742 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 56-264 |
| Cow position: | chr12:18040670-18040874 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 79, 9 |
| Conread position: | 56-374 |
| Cow position: | chr12:30753651-30753316 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 115 |
| Conread position: | 56-464 |
| Cow position: | chr12:10461927-10461501 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 56-471 |
| Cow position: | chr12:24755108-24755527 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 9 |
| Conread position: | 57-243 |
| Cow position: | chr12:29161889-29162072 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 57-264 |
| Cow position: | chr12:37728066-37727865 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 57-264 |
| Cow position: | chr12:37732858-37733059 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 57-270 |
| Cow position: | chr12:40270166-40270374 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 80, 111 |
| Conread position: | 57-270 |
| Cow position: | chr12:42167574-42167358 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 110, 82 |
| Conread position: | 57-390 |
| Cow position: | chr12:1223417-1223755 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 57-434 |
| Cow position: | chr12:18123606-18123219 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 50 |
| Conread position: | 58-264 |
| Cow position: | chr12:18769148-18769357 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 56, 82 |
| Conread position: | 59-219 |
| Cow position: | chr12:5459188-5459026 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 59-264 |
| Cow position: | chr12:38010135-38010327 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 59-285 |
| Cow position: | chr12:18076458-18076231 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 122 |
| Conread position: | 60-270 |
| Cow position: | chr12:1848611-1848826 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 60-335 |
| Cow position: | chr12:31060049-31060350 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 287 |
| Conread position: | 60-392 |
| Cow position: | chr12:35218481-35218829 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 73, 194 |
| Conread position: | 60-418 |
| Cow position: | chr12:19872350-19871986 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 69 |
| Conread position: | 60-457 |
| Cow position: | chr12:36568137-36568539 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 119 |
| Conread position: | 62-254 |
| Cow position: | chr12:31841364-31841165 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 63-391 |
| Cow position: | chr12:40158318-40158661 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 192 |
| Conread position: | 66-182 |
| Cow position: | chr12:31882264-31882150 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 66-261 |
| Cow position: | chr12:4134588-4134386 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 115, 194 |
| Conread position: | 67-228 |
| Cow position: | chr12:24180812-24180652 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 7 |
| Conread position: | 68-262 |
| Cow position: | chr12:30728320-30728519 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 68, 49 |
| Conread position: | 70-264 |
| Cow position: | chr12:42698309-42698506 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 70-379 |
| Cow position: | chr12:3880339-3880667 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 111, 61 |
| Conread position: | 71-180 |
| Cow position: | chr12:32334095-32334204 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-324 |
| Cow position: | chr12:17270452-17270191 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 126 |
| Conread position: | 79-264 |
| Cow position: | chr12:12178826-12178639 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 79-285 |
| Cow position: | chr12:34148445-34148654 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 86, 60 |
| Conread position: | 82-464 |
| Cow position: | chr12:19420030-19420439 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 87-261 |
| Cow position: | chr12:23154563-23154745 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 8, 174 |
| Conread position: | 87-264 |
| Cow position: | chr12:3076720-3076905 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 87-445 |
| Cow position: | chr12:16359775-16359398 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 267 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 38, 333 |
| Conread position: | 89-277 |
| Cow position: | chr12:25805216-25805405 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 98-391 |
| Cow position: | chr12:7881831-7882135 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 98-464 |
| Cow position: | chr12:45160619-45161007 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 307 |
| Conread position: | 104-263 |
| Cow position: | chr12:37123390-37123232 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 104-285 |
| Cow position: | chr12:7109071-7108885 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 123-332 |
| Cow position: | chr12:25529895-25529680 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 58, 194 |
| Conread position: | 129-463 |
| Cow position: | chr12:27175811-27176152 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 160 |
| Conread position: | 140-401 |
| Cow position: | chr12:3600052-3600330 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 249 |
Show alignments to all cow chromosomes.