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Cow genome map

           
Conread name:
           
Tra1-TCH01G050016
        

               
Conread position:
               
1-137
               

               
Cow position:
               
chr15:31928825-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr15:35205075-35204935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr15:49274025-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr15:9107105-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr15:20422711-20422543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr15:10512201-10512034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr15:12870793-12870626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:286549-286719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr15:8354112-8354289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:4295834-4296013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:10608235-10608057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:11559284-11559108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:12441754-12441576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:16904701-16904876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:22871680-22871855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr15:44658431-44658606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr15:11268777-11268958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
159, 146
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr15:5726396-5726582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr15:39316771-39316575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr15:11560444-11560248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
136, 62
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr15:16657562-16657760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
134, 43
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr15:21582853-21582649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr15:38877233-38877027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 86
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr15:16439760-16439543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr15:2968407-2968620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr15:7456767-7456984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr15:31137395-31137174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
176, 44
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr15:36773627-36773407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr15:21821853-21821629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr15:23696840-23696624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr15:11646421-11646190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 140
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr15:51898299-51898535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
152, 54
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:27900440-27900194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
166, 97
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:50341183-50341425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr15:11995956-11995714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
187, 45
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr15:10845790-10846042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:20351903-20352157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:26903260-26903519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 143
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr15:50322665-50322920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 54
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr15:35417554-35417294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:12304709-12304968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:1301207-1301468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:6462426-6462174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:22938691-22938449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr15:36782254-36782004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr15:14856396-14856149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr15:30820766-30820504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
131, 64
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr15:41000000-40999727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:17100639-17100384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:21893849-21894114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr15:21941775-21941515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 102
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:16928023-16927751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:19771203-19771457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:20487132-20486884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:21366126-21365867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:22136754-22137016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
180, 93
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:24797739-24797481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
180, 44
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:25667151-25666890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:31857662-31857925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 35
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:39621409-39621671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 166
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr15:41418762-41418484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr15:26573450-26573721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
156, 51
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr15:5632757-5633007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:23768186-23767926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:24045028-24044759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
169, 81
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:24941301-24941047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr15:41620120-41619847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr15:20725545-20725273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
142, 19
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr15:11011532-11011264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr15:45322852-45323129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr15:27247572-27247866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr15:8962078-8962354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
175, 113
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr15:25585019-25584735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
172, 67
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr15:46868644-46868358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 139
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr15:51427755-51427469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr15:13515437-13515780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
176, 138
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:13387147-13387512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 139
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr15:43626540-43626925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 51
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr15:26421531-26421124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
113, 139
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr15:50177180-50177573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr15:47280068-47279672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr15:2953063-2952663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr15:17196219-17196648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr15:45479073-45479514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 94
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr15:44256548-44256984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 50
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr15:9871346-9870889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr15:794950-794482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr15:13684197-13683756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 62
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr15:22751523-22752002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 56
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr15:21608649-21608182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
271, 44
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:1083305-1082837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 43
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:1330032-1329556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:5498963-5498482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 367
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:15041351-15040887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
166, 44
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:16112471-16112957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:17233264-17233733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:19119540-19119067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 176
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:21389096-21388622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 49
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:21832365-21831874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 446
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:26912005-26911531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:30047475-30046987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:33284948-33285417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 67
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:36391746-36392213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 44
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:37381695-37382173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr15:40798356-40797880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 45
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr15:45345-44885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
164, 45
               

               
Conread position:
               
2-143
               

               
Cow position:
               
chr15:39326444-39326304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
2-144
               

               
Cow position:
               
chr15:43673862-43673726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr15:23572614-23572415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr15:26919203-26918974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr15:26404354-26404601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr15:9928431-9928689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr15:35642092-35642353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
2-376
               

               
Cow position:
               
chr15:20391203-20390827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
2-462
               

               
Cow position:
               
chr15:37716861-37716391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 246
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr15:36435277-36435754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr15:42142931-42143399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr15:47843179-47842718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
3-150
               

               
Cow position:
               
chr15:37749278-37749132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr15:51374080-51374257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr15:9622262-9622484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr15:39373362-39373138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
174, 55
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr15:2145063-2144805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
3-258
               

               
Cow position:
               
chr15:49922207-49922466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr15:35839016-35838757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
180, 42
               

               
Conread position:
               
3-270
               

               
Cow position:
               
chr15:3572631-3572365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 138
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr15:8579055-8578635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr15:17261087-17260614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr15:39436288-39436503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 139
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr15:37777424-37777654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr15:29026809-29026547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr15:4534980-4535240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr15:23791536-23791790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
169, 41
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr15:36259530-36259253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
158, 54
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr15:5730015-5730282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr15:5535826-5536304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
5-146
               

               
Cow position:
               
chr15:1857799-1857940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
110, 135
               

               
Conread position:
               
5-160
               

               
Cow position:
               
chr15:4418325-4418174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
5-160
               

               
Cow position:
               
chr15:36725103-36724953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr15:32324133-32323929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr15:225729-225498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr15:1297814-1298069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
130, 48
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr15:10245922-10245676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
171, 38
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr15:39599518-39599773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
5-276
               

               
Cow position:
               
chr15:40009579-40009305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
46, 135
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr15:11692965-11692690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr15:39490581-39490222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 40
               

               
Conread position:
               
5-376
               

               
Cow position:
               
chr15:13554428-13554803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
5-446
               

               
Cow position:
               
chr15:363100-363545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
5-463
               

               
Cow position:
               
chr15:20534375-20533900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 89
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr15:5234926-5234456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 49
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr15:6970062-6970527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 50
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr15:31467137-31467262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr15:53036895-53036715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr15:2522909-2523102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr15:34145078-34144862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
175, 35
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr15:1804259-1804031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr15:10088395-10088633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr15:12785504-12785766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr15:4501062-4501311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr15:48851416-48851165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 40
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr15:21803585-21803324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr15:28126969-28126716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr15:53680684-53680435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
174, 39
               

               
Conread position:
               
6-315
               

               
Cow position:
               
chr15:21421013-21421325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
6-354
               

               
Cow position:
               
chr15:23927398-23927049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr15:20472472-20472087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 95
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr15:23798454-23798063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
6-442
               

               
Cow position:
               
chr15:32204823-32204381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
236, 23
               

               
Conread position:
               
6-450
               

               
Cow position:
               
chr15:608222-608691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
6-456
               

               
Cow position:
               
chr15:7430054-7430525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr15:39862-40330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr15:4918993-4918510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 201
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr15:50957724-50957243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr15:52778451-52777985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr15:38898499-38898972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
7-371
               

               
Cow position:
               
chr15:45351206-45350837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr15:15881003-15881469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr15:33976612-33976143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 78
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr15:38837825-38837996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr15:23114914-23115132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 175
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr15:52740048-52739793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
8-330
               

               
Cow position:
               
chr15:27280949-27281279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 28
               

               
Conread position:
               
8-446
               

               
Cow position:
               
chr15:6331961-6331529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 50
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr15:44640975-44641444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
10-256
               

               
Cow position:
               
chr15:16603898-16604147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 99
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr15:18671375-18671199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr15:85167-84990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 29
               

               
Conread position:
               
11-192
               

               
Cow position:
               
chr15:12655835-12655655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
11-252
               

               
Cow position:
               
chr15:38806421-38806174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr15:27973136-27972876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
11-332
               

               
Cow position:
               
chr15:46611013-46611337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
255, 44
               

               
Conread position:
               
11-339
               

               
Cow position:
               
chr15:47105122-47105441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
11-345
               

               
Cow position:
               
chr15:22939244-22938913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
11-376
               

               
Cow position:
               
chr15:16936767-16936404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr15:8610239-8610031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr15:25306627-25306831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
12-234
               

               
Cow position:
               
chr15:1722768-1722548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
12-254
               

               
Cow position:
               
chr15:51632955-51632727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr15:35112800-35112560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
12-260
               

               
Cow position:
               
chr15:11629804-11629553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr15:38883229-38883489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr15:42415340-42415591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
141, 39
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr15:43914009-43913751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
12-270
               

               
Cow position:
               
chr15:51460307-51460566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr15:8428092-8428411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
12-327
               

               
Cow position:
               
chr15:53101672-53102002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr15:18720391-18720826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 33
               

               
Conread position:
               
12-451
               

               
Cow position:
               
chr15:32226790-32226351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 91
               

               
Conread position:
               
12-464
               

               
Cow position:
               
chr15:20459224-20458752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
12-464
               

               
Cow position:
               
chr15:43827690-43827227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
13-258
               

               
Cow position:
               
chr15:21908018-21908261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
164, 33
               

               
Conread position:
               
13-262
               

               
Cow position:
               
chr15:10456931-10456682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
13-343
               

               
Cow position:
               
chr15:47990688-47990332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
13-446
               

               
Cow position:
               
chr15:10335838-10336280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 13
               

               
Conread position:
               
13-464
               

               
Cow position:
               
chr15:34207111-34206651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
15-143
               

               
Cow position:
               
chr15:23865984-23865860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
15-203
               

               
Cow position:
               
chr15:23598227-23598036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
15-243
               

               
Cow position:
               
chr15:53402906-53402686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
16-253
               

               
Cow position:
               
chr15:39598328-39598560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
16-264
               

               
Cow position:
               
chr15:23487082-23486840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
16-391
               

               
Cow position:
               
chr15:20370374-20369994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
16-467
               

               
Cow position:
               
chr15:16639872-16640345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
144, 36
               

               
Conread position:
               
18-270
               

               
Cow position:
               
chr15:29340151-29340401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
19-460
               

               
Cow position:
               
chr15:31949082-31949545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
20-262
               

               
Cow position:
               
chr15:5683230-5683465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr15:21522876-21523123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
161, 33
               

               
Conread position:
               
20-285
               

               
Cow position:
               
chr15:36621499-36621772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
20-343
               

               
Cow position:
               
chr15:3700199-3699854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
20-429
               

               
Cow position:
               
chr15:24038312-24037895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
20-434
               

               
Cow position:
               
chr15:4138222-4138650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
21-273
               

               
Cow position:
               
chr15:17084301-17084554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
21-285
               

               
Cow position:
               
chr15:6657188-6657459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
21-464
               

               
Cow position:
               
chr15:22095215-22095657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
21-470
               

               
Cow position:
               
chr15:16583605-16583149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
266, 31
               

               
Conread position:
               
22-264
               

               
Cow position:
               
chr15:11363084-11362849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
25-264
               

               
Cow position:
               
chr15:32287660-32287425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
156, 28
               

               
Conread position:
               
28-192
               

               
Cow position:
               
chr15:43750610-43750775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
28-366
               

               
Cow position:
               
chr15:49738948-49738594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 24
               

               
Conread position:
               
30-361
               

               
Cow position:
               
chr15:27281899-27282237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
35-241
               

               
Cow position:
               
chr15:12723190-12723396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
36-264
               

               
Cow position:
               
chr15:14020573-14020804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
36-285
               

               
Cow position:
               
chr15:12316032-12316278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
143, 19
               

               
Conread position:
               
36-391
               

               
Cow position:
               
chr15:19403081-19403453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
37-285
               

               
Cow position:
               
chr15:37931658-37931415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
38-396
               

               
Cow position:
               
chr15:32979930-32979548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
41-464
               

               
Cow position:
               
chr15:144126-143683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
42-276
               

               
Cow position:
               
chr15:21836788-21837034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
46-331
               

               
Cow position:
               
chr15:4485255-4485562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
47-213
               

               
Cow position:
               
chr15:7535554-7535386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
49-285
               

               
Cow position:
               
chr15:16616317-16616548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
52-281
               

               
Cow position:
               
chr15:36346879-36347122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 240
               

               
Conread position:
               
54-431
               

               
Cow position:
               
chr15:29792788-29792403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
55-260
               

               
Cow position:
               
chr15:18018045-18018240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
55-261
               

               
Cow position:
               
chr15:7827915-7827707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
190, 114
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr15:30001808-30002022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
55-267
               

               
Cow position:
               
chr15:45216943-45217157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
117, 84
               

               
Conread position:
               
55-464
               

               
Cow position:
               
chr15:38846226-38846637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
56-256
               

               
Cow position:
               
chr15:5071975-5071773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
56-258
               

               
Cow position:
               
chr15:38394542-38394747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr15:5571515-5571303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr15:22168181-22168391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
56-285
               

               
Cow position:
               
chr15:24128775-24129002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr15:24616695-24617109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
57-175
               

               
Cow position:
               
chr15:5567063-5567184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
57-256
               

               
Cow position:
               
chr15:43248647-43248446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
57-390
               

               
Cow position:
               
chr15:22713705-22713367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
57-485
               

               
Cow position:
               
chr15:22532362-22532810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
58-434
               

               
Cow position:
               
chr15:53183452-53183066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
59-270
               

               
Cow position:
               
chr15:4093806-4093586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 80
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr15:16307540-16307770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
59-450
               

               
Cow position:
               
chr15:30985661-30985261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 168
               

               
Conread position:
               
60-464
               

               
Cow position:
               
chr15:14505554-14505975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
61-415
               

               
Cow position:
               
chr15:51822270-51822642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
76, 173
               

               
Conread position:
               
64-264
               

               
Cow position:
               
chr15:34104402-34104599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
65-264
               

               
Cow position:
               
chr15:51831465-51831259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
65-464
               

               
Cow position:
               
chr15:6082511-6082094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
68-254
               

               
Cow position:
               
chr15:33243285-33243481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
68-260
               

               
Cow position:
               
chr15:33525553-33525755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
68-264
               

               
Cow position:
               
chr15:9062460-9062261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
68-467
               

               
Cow position:
               
chr15:4676873-4676454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 148
               

               
Conread position:
               
69-236
               

               
Cow position:
               
chr15:6168384-6168210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
70-223
               

               
Cow position:
               
chr15:44436868-44437026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
70-429
               

               
Cow position:
               
chr15:5200147-5199781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
111, 156
               

               
Conread position:
               
71-264
               

               
Cow position:
               
chr15:9267914-9267731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
73-402
               

               
Cow position:
               
chr15:1885188-1884862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 96
               

               
Conread position:
               
78-344
               

               
Cow position:
               
chr15:30982070-30982345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
80-446
               

               
Cow position:
               
chr15:28924618-28924235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
82-264
               

               
Cow position:
               
chr15:26158467-26158285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
87-263
               

               
Cow position:
               
chr15:240996-241180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
90-270
               

               
Cow position:
               
chr15:31202157-31202345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
94-360
               

               
Cow position:
               
chr15:18284398-18284689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
98-429
               

               
Cow position:
               
chr15:21949124-21948787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
99-270
               

               
Cow position:
               
chr15:31085702-31085873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
141-390
               

               
Cow position:
               
chr15:3497263-3497517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
131, 0
               
Show alignments to all cow chromosomes.