Cow genome map

Conread name: Tra1-TCH01G050016

Conread position: 1-133
Cow position: chr18:46047856-46047723 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 65

Conread position: 1-136
Cow position: chr18:22274852-22274983 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 1-140
Cow position: chr18:5632253-5632114 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-145
Cow position: chr18:14521887-14521748 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 52, 0

Conread position: 1-145
Cow position: chr18:19688009-19687864 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 1-145
Cow position: chr18:44027106-44026968 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-145
Cow position: chr18:52387458-52387600 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 1-148
Cow position: chr18:51643380-51643528 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 136, 92

Conread position: 1-163
Cow position: chr18:51850575-51850733 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 134, 20

Conread position: 1-165
Cow position: chr18:55747671-55747508 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 139, 43

Conread position: 1-168
Cow position: chr18:43555539-43555703 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 1-180
Cow position: chr18:27109307-27109487 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 45

Conread position: 1-182
Cow position: chr18:19896466-19896648 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 1-187
Cow position: chr18:35886870-35886681 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 104

Conread position: 1-191
Cow position: chr18:48828789-48828983 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 59

Conread position: 1-197
Cow position: chr18:36183920-36184114 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 140, 45

Conread position: 1-201
Cow position: chr18:18961850-18962054 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 172, 43

Conread position: 1-213
Cow position: chr18:18592458-18592247 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 154, 45

Conread position: 1-218
Cow position: chr18:35777941-35777728 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 1-221
Cow position: chr18:33896439-33896656 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 120

Conread position: 1-230
Cow position: chr18:24945820-24946055 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 134, 95

Conread position: 1-230
Cow position: chr18:33008048-33007814 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 172, 138

Conread position: 1-236
Cow position: chr18:26355043-26355281 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 138, 45

Conread position: 1-254
Cow position: chr18:2480641-2480376 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 50

Conread position: 1-254
Cow position: chr18:11691423-11691678 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 176, 73

Conread position: 1-259
Cow position: chr18:48453673-48453422 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 52

Conread position: 1-263
Cow position: chr18:11183927-11183667 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 52

Conread position: 1-263
Cow position: chr18:39662764-39662510 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 1-263
Cow position: chr18:44262616-44262348 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 49, 141

Conread position: 1-264
Cow position: chr18:267830-268087 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 45, 0

Conread position: 1-264
Cow position: chr18:2592179-2592449 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 56

Conread position: 1-264
Cow position: chr18:4648762-4649011 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 134, 45

Conread position: 1-264
Cow position: chr18:4668513-4668770 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 166, 51

Conread position: 1-264
Cow position: chr18:4748897-4749159 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 136, 64

Conread position: 1-264
Cow position: chr18:5766398-5766153 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 1-264
Cow position: chr18:7487235-7486976 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 180, 51

Conread position: 1-264
Cow position: chr18:10904835-10904570 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 45

Conread position: 1-264
Cow position: chr18:22214473-22214210 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 106

Conread position: 1-264
Cow position: chr18:29371852-29371592 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 180, 52

Conread position: 1-264
Cow position: chr18:39875274-39875535 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 171, 29

Conread position: 1-264
Cow position: chr18:42747577-42747320 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 134, 45

Conread position: 1-264
Cow position: chr18:56159447-56159189 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 1-264
Cow position: chr18:56181476-56181731 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 108, 0

Conread position: 1-265
Cow position: chr18:33606616-33606355 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 52

Conread position: 1-270
Cow position: chr18:3709021-3708759 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 152

Conread position: 1-270
Cow position: chr18:5487230-5486969 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 183, 44

Conread position: 1-270
Cow position: chr18:15025658-15025397 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 77

Conread position: 1-271
Cow position: chr18:20127120-20127385 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 55

Conread position: 1-271
Cow position: chr18:29356639-29356912 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 28, 57

Conread position: 1-277
Cow position: chr18:21266491-21266219 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 180, 86

Conread position: 1-277
Cow position: chr18:43822965-43823242 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 137, 65

Conread position: 1-285
Cow position: chr18:25282568-25282852 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 45

Conread position: 1-289
Cow position: chr18:52632422-52632706 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 171, 53

Conread position: 1-337
Cow position: chr18:2774616-2774954 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 227, 52

Conread position: 1-349
Cow position: chr18:10576090-10575733 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 1-352
Cow position: chr18:1585128-1585485 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 152

Conread position: 1-352
Cow position: chr18:33407602-33407240 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 54

Conread position: 1-377
Cow position: chr18:23062215-23062610 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 256
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 181, 51

Conread position: 1-389
Cow position: chr18:38607212-38606817 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 59, 45

Conread position: 1-399
Cow position: chr18:34621375-34621793 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 55

Conread position: 1-402
Cow position: chr18:13507751-13508156 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 138

Conread position: 1-431
Cow position: chr18:55552952-55552505 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 52

Conread position: 1-434
Cow position: chr18:3158612-3159062 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 305
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 49, 35

Conread position: 1-434
Cow position: chr18:4182202-4182663 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 80

Conread position: 1-434
Cow position: chr18:17005245-17004791 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 435

Conread position: 1-434
Cow position: chr18:22120900-22121343 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 42

Conread position: 1-434
Cow position: chr18:35636361-35636810 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 53

Conread position: 1-434
Cow position: chr18:55806648-55807064 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 290
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 132, 45

Conread position: 1-445
Cow position: chr18:28768351-28767893 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 73

Conread position: 1-456
Cow position: chr18:19646160-19645690 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 45

Conread position: 1-457
Cow position: chr18:4539896-4540358 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 45

Conread position: 1-461
Cow position: chr18:51757079-51756609 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 44

Conread position: 1-462
Cow position: chr18:10861444-10861903 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 54

Conread position: 1-464
Cow position: chr18:6609873-6610314 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 52

Conread position: 1-464
Cow position: chr18:14815357-14815834 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 45

Conread position: 1-464
Cow position: chr18:24022373-24021898 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 175

Conread position: 1-464
Cow position: chr18:37002617-37002142 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 45

Conread position: 1-464
Cow position: chr18:39709870-39709397 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 51

Conread position: 1-464
Cow position: chr18:45104456-45104920 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 332
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 50, 172

Conread position: 1-464
Cow position: chr18:55589501-55589966 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 117

Conread position: 1-479
Cow position: chr18:39001818-39002309 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 45

Conread position: 2-143
Cow position: chr18:7970356-7970217 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 54

Conread position: 2-146
Cow position: chr18:52855039-52854893 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 2-180
Cow position: chr18:18369375-18369553 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 49, 138

Conread position: 2-182
Cow position: chr18:27637196-27637018 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 130, 53

Conread position: 2-196
Cow position: chr18:39623784-39623590 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 130, 53

Conread position: 2-207
Cow position: chr18:14085448-14085242 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 118

Conread position: 2-223
Cow position: chr18:25984586-25984808 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 179, 54

Conread position: 2-262
Cow position: chr18:23766426-23766690 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 44

Conread position: 2-262
Cow position: chr18:43806439-43806177 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 151, 43

Conread position: 2-264
Cow position: chr18:33157803-33157545 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 54

Conread position: 2-269
Cow position: chr18:11684966-11684709 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 179, 56

Conread position: 2-270
Cow position: chr18:38985677-38985405 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 44

Conread position: 2-273
Cow position: chr18:49100384-49100654 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 267, 44

Conread position: 2-281
Cow position: chr18:4796957-4796676 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 151, 87

Conread position: 2-285
Cow position: chr18:26998867-26998567 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 137, 26

Conread position: 2-345
Cow position: chr18:15880860-15881229 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 49, 140

Conread position: 2-369
Cow position: chr18:55505391-55505005 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 261
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 38

Conread position: 2-412
Cow position: chr18:36098196-36097775 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 145

Conread position: 2-450
Cow position: chr18:36458918-36458449 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 53

Conread position: 2-464
Cow position: chr18:56150659-56151147 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 326
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 141

Conread position: 2-466
Cow position: chr18:55015352-55014896 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 38

Conread position: 3-123
Cow position: chr18:37303129-37303010 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 42, 0

Conread position: 3-202
Cow position: chr18:54056533-54056344 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 169, 45

Conread position: 3-224
Cow position: chr18:42479603-42479828 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 170, 51

Conread position: 3-226
Cow position: chr18:41005083-41005302 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 3-264
Cow position: chr18:21192427-21192686 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 44

Conread position: 3-264
Cow position: chr18:25647265-25647525 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 55, 137

Conread position: 3-464
Cow position: chr18:21251965-21251503 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 41

Conread position: 4-154
Cow position: chr18:35874063-35873910 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 4-207
Cow position: chr18:39434809-39434604 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 147, 71

Conread position: 4-242
Cow position: chr18:38344791-38344546 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 136

Conread position: 4-392
Cow position: chr18:21102790-21103156 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 131, 42

Conread position: 4-429
Cow position: chr18:16417721-16418151 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 42

Conread position: 5-160
Cow position: chr18:50974313-50974466 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 128, 46

Conread position: 5-218
Cow position: chr18:219321-219102 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 5-222
Cow position: chr18:15340463-15340674 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 80, 40

Conread position: 5-222
Cow position: chr18:43020421-43020624 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 162, 41

Conread position: 5-261
Cow position: chr18:20271038-20271293 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 175, 47

Conread position: 5-263
Cow position: chr18:45573089-45572834 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 170, 41

Conread position: 5-264
Cow position: chr18:1144202-1144469 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 134, 76

Conread position: 5-264
Cow position: chr18:2608744-2609005 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 52, 41

Conread position: 5-264
Cow position: chr18:20174148-20174406 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 140, 36

Conread position: 5-264
Cow position: chr18:21528384-21528129 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 129, 47

Conread position: 5-264
Cow position: chr18:32121086-32121337 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 130, 41

Conread position: 5-264
Cow position: chr18:47525389-47525130 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 134

Conread position: 5-264
Cow position: chr18:51656061-51656329 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 132, 50

Conread position: 5-270
Cow position: chr18:55789013-55789274 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 163, 47

Conread position: 5-285
Cow position: chr18:24957282-24956999 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 162, 40

Conread position: 5-285
Cow position: chr18:54572311-54572593 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 172, 25

Conread position: 5-310
Cow position: chr18:10322787-10322480 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 130, 50

Conread position: 5-359
Cow position: chr18:55397291-55396928 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 74

Conread position: 5-364
Cow position: chr18:14586489-14586870 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 41

Conread position: 5-392
Cow position: chr18:20998642-20999036 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 48

Conread position: 5-446
Cow position: chr18:9066679-9066242 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 79

Conread position: 5-449
Cow position: chr18:37023569-37024034 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 134

Conread position: 5-450
Cow position: chr18:19849772-19850224 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 33

Conread position: 5-462
Cow position: chr18:11867318-11866858 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 48

Conread position: 5-463
Cow position: chr18:43283775-43284241 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 50

Conread position: 5-464
Cow position: chr18:11377346-11376872 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 5-464
Cow position: chr18:18918977-18919431 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 5-464
Cow position: chr18:19193384-19193838 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 40

Conread position: 5-464
Cow position: chr18:40759188-40758719 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 47

Conread position: 6-150
Cow position: chr18:4607692-4607833 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 6-223
Cow position: chr18:14871890-14872101 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 39, 0

Conread position: 6-239
Cow position: chr18:4495906-4496139 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 129, 47

Conread position: 6-250
Cow position: chr18:35582117-35582364 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 62, 134

Conread position: 6-264
Cow position: chr18:35827432-35827691 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 46

Conread position: 6-266
Cow position: chr18:3044429-3044152 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 6-270
Cow position: chr18:52658392-52658138 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 40

Conread position: 6-282
Cow position: chr18:19831290-19831003 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 118, 44

Conread position: 6-285
Cow position: chr18:7947370-7947078 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 28

Conread position: 6-285
Cow position: chr18:11166961-11166682 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 51

Conread position: 6-285
Cow position: chr18:49161456-49161753 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 67, 46

Conread position: 6-328
Cow position: chr18:36750449-36750142 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 136, 49

Conread position: 6-339
Cow position: chr18:35537250-35537579 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 6-346
Cow position: chr18:18562556-18562912 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 136, 39

Conread position: 6-418
Cow position: chr18:21205344-21204947 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 6-451
Cow position: chr18:52635090-52635562 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 241

Conread position: 7-200
Cow position: chr18:47812450-47812257 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 128, 48

Conread position: 7-218
Cow position: chr18:1859239-1859450 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 37

Conread position: 7-255
Cow position: chr18:1582291-1582542 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 100

Conread position: 7-259
Cow position: chr18:17649759-17650007 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 111

Conread position: 7-264
Cow position: chr18:22275054-22275311 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 174, 48

Conread position: 7-464
Cow position: chr18:7951094-7950617 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 325
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 146, 75

Conread position: 7-464
Cow position: chr18:7956125-7955655 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 52

Conread position: 8-230
Cow position: chr18:12809833-12809617 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 29

Conread position: 8-256
Cow position: chr18:19761677-19761430 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 13

Conread position: 8-262
Cow position: chr18:5995448-5995198 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 129, 97

Conread position: 8-275
Cow position: chr18:47314302-47314581 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 48, 0

Conread position: 8-447
Cow position: chr18:11322574-11322114 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 49

Conread position: 10-201
Cow position: chr18:18868731-18868530 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 11-264
Cow position: chr18:16847670-16847422 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 168, 156

Conread position: 11-264
Cow position: chr18:31586395-31586640 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 157, 41

Conread position: 11-264
Cow position: chr18:41271061-41270812 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 170, 35

Conread position: 11-269
Cow position: chr18:47868440-47868174 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 68, 41

Conread position: 11-437
Cow position: chr18:51691487-51691934 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 44

Conread position: 11-464
Cow position: chr18:33756849-33756398 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 46

Conread position: 12-170
Cow position: chr18:45185730-45185565 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 145

Conread position: 12-227
Cow position: chr18:42966840-42966615 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 43

Conread position: 12-259
Cow position: chr18:50382227-50381986 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 165, 34

Conread position: 12-264
Cow position: chr18:11680698-11680444 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 169, 40

Conread position: 12-264
Cow position: chr18:26586683-26586941 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 130, 34

Conread position: 12-464
Cow position: chr18:29388196-29387744 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 317
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 260, 127

Conread position: 13-216
Cow position: chr18:51392666-51392874 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 42

Conread position: 13-256
Cow position: chr18:49665178-49665420 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 39

Conread position: 13-269
Cow position: chr18:48290466-48290719 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 85

Conread position: 13-285
Cow position: chr18:35076366-35076090 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 131

Conread position: 14-255
Cow position: chr18:37382116-37382365 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 14-349
Cow position: chr18:1405785-1405456 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 217
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 146, 84

Conread position: 15-187
Cow position: chr18:37689114-37688939 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 30

Conread position: 15-285
Cow position: chr18:30673670-30673937 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 40

Conread position: 16-256
Cow position: chr18:33793674-33793440 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 119, 35

Conread position: 16-257
Cow position: chr18:26937691-26937463 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 107, 29

Conread position: 16-376
Cow position: chr18:21195371-21195745 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 84

Conread position: 16-383
Cow position: chr18:55461736-55462121 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 185, 30

Conread position: 16-455
Cow position: chr18:4707311-4707769 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 305
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 161, 28

Conread position: 17-333
Cow position: chr18:5578278-5577963 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 162, 118

Conread position: 19-264
Cow position: chr18:52864340-52864592 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 212

Conread position: 20-207
Cow position: chr18:53962658-53962464 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 20-241
Cow position: chr18:7059188-7058977 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 32

Conread position: 20-264
Cow position: chr18:4316278-4316031 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 157, 26

Conread position: 20-285
Cow position: chr18:51712734-51713006 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 33

Conread position: 20-465
Cow position: chr18:28101600-28101132 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 119

Conread position: 21-219
Cow position: chr18:55715882-55716079 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 114, 32

Conread position: 21-264
Cow position: chr18:31724911-31725160 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 34

Conread position: 21-276
Cow position: chr18:16045033-16045288 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 119

Conread position: 21-464
Cow position: chr18:16227528-16227074 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 295
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 156, 24

Conread position: 22-256
Cow position: chr18:21176159-21175914 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 123

Conread position: 22-264
Cow position: chr18:52382668-52382422 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 175

Conread position: 22-464
Cow position: chr18:49543440-49542996 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 23

Conread position: 25-465
Cow position: chr18:19159011-19159455 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 26

Conread position: 28-263
Cow position: chr18:18957838-18958066 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 110, 24

Conread position: 28-276
Cow position: chr18:54658270-54658013 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 27

Conread position: 29-270
Cow position: chr18:25206230-25206474 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 155, 110

Conread position: 30-354
Cow position: chr18:26286868-26286529 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 137, 24

Conread position: 30-424
Cow position: chr18:22092735-22092335 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 15

Conread position: 31-203
Cow position: chr18:18815712-18815888 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 25, 156

Conread position: 34-389
Cow position: chr18:9010672-9010313 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 238, 12

Conread position: 34-464
Cow position: chr18:35058294-35057854 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 22

Conread position: 36-203
Cow position: chr18:29188967-29188794 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 122

Conread position: 36-255
Cow position: chr18:21768587-21768360 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 36-266
Cow position: chr18:46436809-46437031 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 64

Conread position: 37-284
Cow position: chr18:36445388-36445136 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 8

Conread position: 39-285
Cow position: chr18:18627372-18627624 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 0

Conread position: 40-243
Cow position: chr18:56192644-56192845 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 35

Conread position: 40-273
Cow position: chr18:4529463-4529238 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 131

Conread position: 42-301
Cow position: chr18:16726595-16726338 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 67

Conread position: 45-401
Cow position: chr18:3209659-3209292 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 11, 82

Conread position: 47-434
Cow position: chr18:5189746-5190142 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 49-264
Cow position: chr18:238403-238620 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 155

Conread position: 50-431
Cow position: chr18:20864929-20864526 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 386

Conread position: 54-285
Cow position: chr18:11233367-11233134 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 90, 11

Conread position: 54-464
Cow position: chr18:13293446-13293016 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 86

Conread position: 55-252
Cow position: chr18:28823033-28823232 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 81, 181

Conread position: 55-259
Cow position: chr18:46048693-46048490 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 125, 27

Conread position: 55-264
Cow position: chr18:30341240-30341439 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 100

Conread position: 55-285
Cow position: chr18:6275753-6275519 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 82, 62

Conread position: 55-285
Cow position: chr18:13359998-13359765 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 126, 70

Conread position: 55-457
Cow position: chr18:26535577-26535993 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 269
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 59, 131

Conread position: 55-465
Cow position: chr18:3098384-3098806 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 103

Conread position: 56-431
Cow position: chr18:6290719-6290319 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 20

Conread position: 57-200
Cow position: chr18:7415094-7415242 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 57-230
Cow position: chr18:17391051-17391216 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 57-255
Cow position: chr18:29796493-29796692 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 126, 82

Conread position: 57-264
Cow position: chr18:51298411-51298205 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 128

Conread position: 57-464
Cow position: chr18:24342549-24342131 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 24

Conread position: 57-464
Cow position: chr18:25002948-25003376 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 83

Conread position: 57-465
Cow position: chr18:23807941-23808339 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 280
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 124, 107

Conread position: 58-243
Cow position: chr18:12023704-12023888 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 58-262
Cow position: chr18:15613925-15614122 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 85

Conread position: 58-393
Cow position: chr18:6881419-6881752 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 229, 32

Conread position: 59-371
Cow position: chr18:23447151-23447479 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 59-459
Cow position: chr18:56167989-56168405 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 277
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 94, 76

Conread position: 61-264
Cow position: chr18:28923910-28924108 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 191, 19

Conread position: 62-233
Cow position: chr18:42432167-42432333 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 63-345
Cow position: chr18:9818764-9818465 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 74, 199

Conread position: 66-264
Cow position: chr18:5647171-5646974 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 71, 179

Conread position: 67-464
Cow position: chr18:7930218-7930634 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 291

Conread position: 68-191
Cow position: chr18:35237002-35237128 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 68-367
Cow position: chr18:4624510-4624826 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 89, 21

Conread position: 68-418
Cow position: chr18:27388474-27388107 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 329

Conread position: 73-460
Cow position: chr18:3180336-3179931 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 62

Conread position: 75-464
Cow position: chr18:6829179-6829557 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 57

Conread position: 84-393
Cow position: chr18:19362380-19362701 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 90-262
Cow position: chr18:39115240-39115418 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 90-264
Cow position: chr18:13172617-13172799 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 90-266
Cow position: chr18:5711768-5711946 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 90-464
Cow position: chr18:21721378-21721773 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 347

Conread position: 94-464
Cow position: chr18:9008037-9007655 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 44

Conread position: 94-464
Cow position: chr18:50637564-50637955 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 45

Conread position: 97-464
Cow position: chr18:1733301-1733660 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 90

Conread position: 97-464
Cow position: chr18:4955359-4955001 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 68

Conread position: 102-271
Cow position: chr18:3422607-3422437 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 71, 37

Conread position: 102-413
Cow position: chr18:51178857-51179187 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 11, 153

Conread position: 104-464
Cow position: chr18:3417058-3416682 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 80, 35

Conread position: 108-464
Cow position: chr18:35295447-35295068 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 337

Conread position: 111-437
Cow position: chr18:24671805-24672134 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 231
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 167, 28

Show alignments to all cow chromosomes.