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Cow genome map

           
Conread name:
           
Tra1-TCH01G050016
        

               
Conread position:
               
1-126
               

               
Cow position:
               
chr2:46971141-46971015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr2:67927776-67927906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr2:24859029-24858895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr2:48635026-48635159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr2:19137871-19138010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr2:32989750-32989884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr2:28750947-28750812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr2:81894322-81894466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr2:46406344-46406193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr2:39597985-39597837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr2:12682643-12682789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 35
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr2:29930899-29931054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr2:83233913-83233755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr2:19156165-19156322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
140, 44
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr2:67745271-67745111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr2:45719154-45719321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr2:54968027-54967858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr2:69367108-69367282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr2:66563212-66563386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr2:47055927-47055754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr2:69199301-69199469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
160, 21
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr2:63709125-63708946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr2:46119745-46119918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr2:31460312-31460488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr2:67313670-67313856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr2:70781113-70780927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr2:9325018-9324823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr2:47065127-47064940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
141, 14
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr2:12686771-12686965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 64
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr2:43857063-43856869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 55
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr2:26170764-26170566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
136, 38
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:13709488-13709289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:17328769-17328567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
166, 69
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:70495291-70495085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:19328566-19328355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr2:61421149-61421365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr2:46353467-46353690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:5130435-5130648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:16505457-16505678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:43790119-43789904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:71622028-71622254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr2:1708992-1708782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
180, 54
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:82019108-82019327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr2:29159925-29159693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr2:42936190-42936426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
180, 123
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr2:44232433-44232668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 45
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr2:46948872-46949100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr2:69823608-69823373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr2:15597456-15597690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr2:41145334-41145090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr2:47808747-47808507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr2:55960592-55960830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr2:5998966-5998722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 52
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr2:39368844-39368589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr2:44229671-44229921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr2:68716649-68716901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr2:45535485-45535236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr2:85926077-85925826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
152, 52
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr2:13604488-13604230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
166, 45
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr2:34535138-34535393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
133, 42
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr2:64323257-64323014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 41
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr2:36105287-36105031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:19494233-19493973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:25597476-25597733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
253, 29
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr2:42183391-42183131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 98
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr2:4273247-4273506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 139
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr2:10319936-10320195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
176, 43
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr2:47990456-47990199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr2:66480167-66480419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:6901797-6901558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
251, 45
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:27337756-27338016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr2:41185488-41185228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
144, 51
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:1364871-1365135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:1658516-1658256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 135
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:4223249-4223508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
134, 37
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:10655837-10656080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:11617114-11616856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 35
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:12237224-12237482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:14826295-14826042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:16839655-16839390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
44, 139
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:18858125-18858377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
197, 54
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:28118520-28118258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 137
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:29802110-29802351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
251, 51
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:32115099-32114822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
56, 140
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:38781727-38781468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 40
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:39263509-39263249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:40691505-40691245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
167, 32
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:40882091-40881843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:46194814-46194552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:46204535-46204265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:46344710-46344445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:48361591-48361326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:49428400-49428143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
243, 80
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:49467648-49467376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 53
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:57393273-57393538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:57932756-57932489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
106, 44
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:61974819-61974551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
177, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:62978654-62978908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:69676512-69676778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:73353815-73353545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:74249209-74249470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
158, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:80839109-80839373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:82609910-82610184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:82957697-82957432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr2:16428377-16428645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
51, 119
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr2:82262357-82262625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 66
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr2:62644606-62644352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
253, 45
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr2:14555729-14555999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr2:53851456-53851185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:18621429-18621159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
50, 122
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:25283134-25282858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:32048499-32048239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:36878199-36878467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
176, 96
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:41248590-41248319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 140
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:42226247-42226515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 131
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:45880757-45881016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
213, 138
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:46230744-46231017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:51594784-51594516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr2:76110415-76110146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
144, 29
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr2:6539219-6539491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
182, 45
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr2:37920766-37921032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr2:37113170-37113453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr2:45470026-45469749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr2:69250646-69250934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 262
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr2:76182792-76183065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr2:46331082-46330793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:79939-80223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
171, 138
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:9063293-9063006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:26102786-26102516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
181, 44
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:26500914-26501204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:27178672-27178394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
172, 45
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:32416842-32417121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
182, 54
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:42927431-42927715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
163, 56
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:46189077-46189354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:52344770-52344498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:54700475-54700185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 132
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr2:64292696-64292963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr2:54790300-54790011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
182, 45
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr2:59397034-59397334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr2:13354695-13354378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:36575754-36575410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
168, 42
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:74353918-74353581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr2:45439458-45439130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
271, 51
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr2:56350898-56351255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
134, 100
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr2:48525523-48525881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr2:22125261-22125642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr2:30642644-30643013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr2:45478578-45478947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
156, 51
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr2:65931984-65931618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
170, 54
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr2:65269671-65270063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 65
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr2:16513877-16513489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
154, 59
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr2:13001818-13001441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 53
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr2:23847806-23848181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 86
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr2:21171400-21171021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr2:46379075-46379469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr2:15298558-15298153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr2:50445921-50445506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr2:29269087-29268676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr2:45499183-45499581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 45
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr2:38273569-38273129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr2:28710980-28711399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 80
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr2:15059043-15059486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 44
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr2:44081456-44081021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 137
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr2:44986307-44986753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr2:61485642-61485207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr2:6697476-6697899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 45
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr2:53532793-53533235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 81
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr2:56828549-56828998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 61
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr2:7524113-7524570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 434
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr2:988712-988249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 54
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr2:34695264-34694796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr2:11806338-11805873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 45
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr2:14854328-14853880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 7
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr2:21416319-21415864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 32
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr2:42384427-42383958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr2:70674747-70674291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 54
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr2:50565953-50565494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr2:33402466-33402942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 38
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr2:45912613-45913092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 138
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr2:6039032-6038558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 364
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr2:32660196-32659735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr2:39815265-39815737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:7194230-7193743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 99
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:11697146-11696672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:12802655-12803110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:13580255-13579784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:19212036-19212503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 52
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:19294613-19294188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 133
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:28820383-28819905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 62
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:39281214-39280738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:40728369-40727907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 52
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:41147887-41147415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 64
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:41452252-41451768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 19
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:44191499-44191020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:44482629-44483094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 52
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:46202281-46201829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:47115900-47116365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:55278579-55279039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 97
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:55632795-55632316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:67596001-67596458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr2:72527979-72527494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr2:26438705-26439186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 54
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr2:70579684-70580180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr2:23493556-23493071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 51
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr2:85091014-85091510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr2:18997738-18997257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
2-128
               

               
Cow position:
               
chr2:77282039-77281914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr2:44051329-44051094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr2:46051283-46051518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr2:21078600-21078372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr2:84983260-84983018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr2:80275275-80275514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr2:5300611-5300356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 6
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr2:24434262-24434524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr2:13684717-13684463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
153, 97
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr2:24469639-24469900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 109
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr2:27173387-27173124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
179, 51
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr2:30816988-30816714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
50, 229
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr2:52484954-52485223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
140, 258
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr2:21382832-21383106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 138
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr2:305831-306110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 44
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr2:13544042-13543764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
2-285
               

               
Cow position:
               
chr2:41710882-41710617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
179, 80
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr2:24007442-24007094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 88
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr2:82656687-82656279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 43
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr2:38628927-38628477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr2:6282003-6282451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr2:70704276-70703801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
56, 138
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr2:11412616-11412430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr2:13000934-13000725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
134, 31
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr2:49248809-49249036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
150, 33
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr2:45522251-45522484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr2:38362348-38362594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr2:65902043-65901793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
150, 36
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr2:67609758-67610013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
146, 42
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr2:35483436-35483700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr2:81927871-81927612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
171, 49
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr2:47403219-47402962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
3-285
               

               
Cow position:
               
chr2:1962494-1962217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
219, 43
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr2:56821376-56821789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr2:17409990-17410381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
3-457
               

               
Cow position:
               
chr2:44170576-44170106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr2:68190622-68191064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
3-464
               

               
Cow position:
               
chr2:38259442-38259913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
4-143
               

               
Cow position:
               
chr2:12051171-12051031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
4-149
               

               
Cow position:
               
chr2:64131439-64131296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
4-179
               

               
Cow position:
               
chr2:41622500-41622327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr2:37424080-37424305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr2:82937285-82937538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
156, 51
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr2:25928472-25928214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr2:41157987-41157722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr2:17940270-17940529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr2:66614893-66615162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr2:75600738-75600454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
130, 54
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr2:57776364-57776085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:21407939-21407586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 116
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr2:42255451-42255049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 42
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr2:777664-778151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr2:4016826-4017316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
135, 8
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr2:44931243-44931713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
5-128
               

               
Cow position:
               
chr2:26880101-26879978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-140
               

               
Cow position:
               
chr2:387761-387893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr2:6267762-6267904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
5-160
               

               
Cow position:
               
chr2:43907173-43907322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr2:14218666-14218492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 135
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr2:83410524-83410343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr2:76122445-76122649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr2:26851180-26850976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
5-237
               

               
Cow position:
               
chr2:13877467-13877233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr2:46020920-46020674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
5-255
               

               
Cow position:
               
chr2:80963631-80963879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr2:25283827-25283567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr2:25285571-25285311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
176, 48
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr2:41954901-41954636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
172, 249
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr2:45935945-45936200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
183, 41
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr2:21720-21988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
131, 24
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr2:81791556-81791825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
128, 41
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr2:70163615-70163348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr2:13582599-13582320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
176, 134
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr2:32264377-32264660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr2:75791298-75791580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
5-359
               

               
Cow position:
               
chr2:22371937-22372300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
176, 49
               

               
Conread position:
               
5-393
               

               
Cow position:
               
chr2:49344725-49344325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 48
               

               
Conread position:
               
5-433
               

               
Cow position:
               
chr2:70945419-70944970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 85
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr2:13369669-13369223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 47
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr2:47097924-47098356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
5-450
               

               
Cow position:
               
chr2:1303964-1303504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 50
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr2:34575233-34574779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 39
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr2:46909421-46909881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 112
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr2:69238294-69237814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 175
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr2:76313853-76314310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 48
               

               
Conread position:
               
5-466
               

               
Cow position:
               
chr2:39662720-39662235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr2:26574555-26574428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
6-140
               

               
Cow position:
               
chr2:36376286-36376154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
6-175
               

               
Cow position:
               
chr2:85498780-85498951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr2:14901153-14900980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
169, 51
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr2:25757613-25757827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr2:73637158-73637383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr2:21380384-21380620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr2:33531934-33532170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr2:68970753-68970511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
6-256
               

               
Cow position:
               
chr2:69770519-69770268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
6-259
               

               
Cow position:
               
chr2:55480224-55480476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr2:20940454-20940198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 40
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr2:80797679-80797432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
6-270
               

               
Cow position:
               
chr2:42608080-42607822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr2:1756055-1755782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr2:27076724-27076452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
175, 40
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr2:66403917-66404195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr2:64473625-64474005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 40
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr2:46294032-46294419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 40
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr2:1210749-1211156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 339
               

               
Conread position:
               
6-434
               

               
Cow position:
               
chr2:58247861-58248292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
6-446
               

               
Cow position:
               
chr2:46184251-46184716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr2:31125794-31125324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr2:36007572-36008038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 49
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr2:69223206-69223691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
6-465
               

               
Cow position:
               
chr2:47047740-47048207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
7-194
               

               
Cow position:
               
chr2:84970701-84970880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr2:36017396-36017648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr2:39489788-39489546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
146, 38
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr2:43474188-43473947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr2:70539359-70539619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr2:43835547-43835812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
174, 46
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr2:44550828-44551083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
7-373
               

               
Cow position:
               
chr2:27600532-27600915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 39
               

               
Conread position:
               
7-464
               

               
Cow position:
               
chr2:36072949-36073415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 47
               

               
Conread position:
               
8-175
               

               
Cow position:
               
chr2:38590491-38590335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr2:78220111-78219937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
154, 131
               

               
Conread position:
               
8-372
               

               
Cow position:
               
chr2:39078390-39078008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr2:45624026-45623638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 44
               

               
Conread position:
               
11-134
               

               
Cow position:
               
chr2:29734834-29734711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr2:60903153-60902973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
123, 143
               

               
Conread position:
               
11-191
               

               
Cow position:
               
chr2:38134255-38134080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
11-201
               

               
Cow position:
               
chr2:70656956-70656774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
170, 35
               

               
Conread position:
               
11-230
               

               
Cow position:
               
chr2:16564695-16564474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
11-258
               

               
Cow position:
               
chr2:15250191-15249946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
11-262
               

               
Cow position:
               
chr2:78766491-78766241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr2:32402958-32403206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
11-264
               

               
Cow position:
               
chr2:61187124-61187367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr2:59906033-59906277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
11-276
               

               
Cow position:
               
chr2:76340642-76340914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
11-277
               

               
Cow position:
               
chr2:15653304-15653566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
11-285
               

               
Cow position:
               
chr2:21644440-21644717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
11-285
               

               
Cow position:
               
chr2:45311108-45311391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
11-286
               

               
Cow position:
               
chr2:36436216-36435935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
11-377
               

               
Cow position:
               
chr2:80116108-80115748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 44
               

               
Conread position:
               
11-391
               

               
Cow position:
               
chr2:52385907-52386309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
11-393
               

               
Cow position:
               
chr2:36137019-36136619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
12-182
               

               
Cow position:
               
chr2:41422657-41422488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
12-192
               

               
Cow position:
               
chr2:14855475-14855300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr2:25722503-25722304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr2:38272156-38272392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
12-262
               

               
Cow position:
               
chr2:46244010-46244267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr2:21764389-21764644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
141, 33
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr2:47361512-47361763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
12-285
               

               
Cow position:
               
chr2:46362833-46362559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
141, 33
               

               
Conread position:
               
12-463
               

               
Cow position:
               
chr2:51824933-51824481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 34
               

               
Conread position:
               
12-486
               

               
Cow position:
               
chr2:47784373-47783891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 34
               

               
Conread position:
               
13-137
               

               
Cow position:
               
chr2:39419578-39419701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
13-150
               

               
Cow position:
               
chr2:45281657-45281524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr2:58057071-58056879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
140, 33
               

               
Conread position:
               
13-255
               

               
Cow position:
               
chr2:1134381-1134628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
168, 42
               

               
Conread position:
               
13-259
               

               
Cow position:
               
chr2:24225819-24226064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
140, 32
               

               
Conread position:
               
13-264
               

               
Cow position:
               
chr2:62685648-62685393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr2:77378251-77377987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
160, 23
               

               
Conread position:
               
13-285
               

               
Cow position:
               
chr2:57939688-57939418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
164, 55
               

               
Conread position:
               
13-384
               

               
Cow position:
               
chr2:64212549-64212935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
13-406
               

               
Cow position:
               
chr2:54654607-54655027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
13-450
               

               
Cow position:
               
chr2:68487999-68488451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 10
               

               
Conread position:
               
13-463
               

               
Cow position:
               
chr2:55877395-55876941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 18
               

               
Conread position:
               
13-464
               

               
Cow position:
               
chr2:82580921-82581390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
14-256
               

               
Cow position:
               
chr2:78116338-78116578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
14-264
               

               
Cow position:
               
chr2:50278031-50277779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
121, 49
               

               
Conread position:
               
14-464
               

               
Cow position:
               
chr2:29041889-29041423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
15-269
               

               
Cow position:
               
chr2:17967022-17967282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
165, 124
               

               
Conread position:
               
15-276
               

               
Cow position:
               
chr2:66916710-66916978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
15-343
               

               
Cow position:
               
chr2:71922234-71921888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
117, 50
               

               
Conread position:
               
15-464
               

               
Cow position:
               
chr2:9591937-9591481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 42
               

               
Conread position:
               
16-182
               

               
Cow position:
               
chr2:45537432-45537594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
16-218
               

               
Cow position:
               
chr2:1638608-1638401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
151, 123
               

               
Conread position:
               
16-269
               

               
Cow position:
               
chr2:25964482-25964733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 123
               

               
Conread position:
               
16-354
               

               
Cow position:
               
chr2:80324848-80325198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
256, 42
               

               
Conread position:
               
16-466
               

               
Cow position:
               
chr2:46357840-46357385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
19-143
               

               
Cow position:
               
chr2:67386476-67386598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr2:56937683-56937484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
162, 36
               

               
Conread position:
               
19-264
               

               
Cow position:
               
chr2:74030985-74031231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 17
               

               
Conread position:
               
20-153
               

               
Cow position:
               
chr2:45907275-45907148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
20-218
               

               
Cow position:
               
chr2:3309025-3309226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
20-222
               

               
Cow position:
               
chr2:4655102-4655301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 9
               

               
Conread position:
               
20-264
               

               
Cow position:
               
chr2:24393689-24393932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
157, 88
               

               
Conread position:
               
20-269
               

               
Cow position:
               
chr2:42872274-42872019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
20-282
               

               
Cow position:
               
chr2:26157709-26157971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
114, 70
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr2:4070922-4070564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
20-391
               

               
Cow position:
               
chr2:15674543-15674158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
162, 24
               

               
Conread position:
               
20-402
               

               
Cow position:
               
chr2:21355849-21356244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 53
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr2:12979013-12979265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr2:28653531-28653774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr2:14710113-14710355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
21-434
               

               
Cow position:
               
chr2:36077352-36076920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
22-390
               

               
Cow position:
               
chr2:56102464-56102856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
22-464
               

               
Cow position:
               
chr2:42394421-42393974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 112
               

               
Conread position:
               
22-465
               

               
Cow position:
               
chr2:48748728-48749179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 118
               

               
Conread position:
               
23-270
               

               
Cow position:
               
chr2:16422552-16422305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chr2:50777768-50777463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 58
               

               
Conread position:
               
25-234
               

               
Cow position:
               
chr2:39514018-39513813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
26-270
               

               
Cow position:
               
chr2:45484969-45485216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
26-464
               

               
Cow position:
               
chr2:38658788-38659237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
28-177
               

               
Cow position:
               
chr2:76764709-76764858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
28-262
               

               
Cow position:
               
chr2:23270937-23271171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
28-264
               

               
Cow position:
               
chr2:59180052-59179813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 7
               

               
Conread position:
               
29-203
               

               
Cow position:
               
chr2:58869172-58869343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
29-264
               

               
Cow position:
               
chr2:77359476-77359247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
29-403
               

               
Cow position:
               
chr2:45259087-45259476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
29-440
               

               
Cow position:
               
chr2:6884216-6883805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
30-337
               

               
Cow position:
               
chr2:82647827-82648137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
31-264
               

               
Cow position:
               
chr2:10867904-10868136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
36-257
               

               
Cow position:
               
chr2:29882755-29882973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
36-264
               

               
Cow position:
               
chr2:47073178-47072948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
38-463
               

               
Cow position:
               
chr2:49608574-49608136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
39-464
               

               
Cow position:
               
chr2:60956357-60955926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
41-250
               

               
Cow position:
               
chr2:19597779-19597564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
41-464
               

               
Cow position:
               
chr2:65603949-65604387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
42-340
               

               
Cow position:
               
chr2:41313873-41313563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
48-456
               

               
Cow position:
               
chr2:9687598-9688013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
48-464
               

               
Cow position:
               
chr2:16752179-16752596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
54-180
               

               
Cow position:
               
chr2:3761378-3761252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
99, 107
               

               
Conread position:
               
54-463
               

               
Cow position:
               
chr2:48617950-48617512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
55-203
               

               
Cow position:
               
chr2:7383712-7383863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
55-213
               

               
Cow position:
               
chr2:17493349-17493515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
55-235
               

               
Cow position:
               
chr2:78229785-78229605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
55-263
               

               
Cow position:
               
chr2:5297714-5297497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr2:16594577-16594364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr2:16632906-16632693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
55-264
               

               
Cow position:
               
chr2:29716861-29717080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
55-270
               

               
Cow position:
               
chr2:333126-333325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
55-270
               

               
Cow position:
               
chr2:45554282-45554071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
55-270
               

               
Cow position:
               
chr2:47008373-47008595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
55-285
               

               
Cow position:
               
chr2:24271200-24270963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
89, 205
               

               
Conread position:
               
55-285
               

               
Cow position:
               
chr2:64830814-64830591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
55-350
               

               
Cow position:
               
chr2:13342014-13342327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr2:85246361-85246769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 207
               

               
Conread position:
               
55-464
               

               
Cow position:
               
chr2:78744668-78744241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
56-246
               

               
Cow position:
               
chr2:60462854-60463041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
56-246
               

               
Cow position:
               
chr2:60468233-60468420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr2:14396276-14396482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr2:51638523-51638303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
56-264
               

               
Cow position:
               
chr2:76969211-76969421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 31
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr2:11900396-11900181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
56-270
               

               
Cow position:
               
chr2:50580340-50580120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 203
               

               
Conread position:
               
56-371
               

               
Cow position:
               
chr2:24709376-24709712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr2:70663979-70663659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
56-464
               

               
Cow position:
               
chr2:46312418-46311993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 83
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr2:28318889-28319072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
57-259
               

               
Cow position:
               
chr2:11599401-11599202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
57-262
               

               
Cow position:
               
chr2:53430693-53430486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
88, 198
               

               
Conread position:
               
57-270
               

               
Cow position:
               
chr2:43596208-43596419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
58-256
               

               
Cow position:
               
chr2:15329356-15329167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
58-418
               

               
Cow position:
               
chr2:26555623-26555995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
58-464
               

               
Cow position:
               
chr2:84997286-84996857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 294
               

               
Conread position:
               
59-264
               

               
Cow position:
               
chr2:15571567-15571771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
59-285
               

               
Cow position:
               
chr2:70746761-70746533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
122, 158
               

               
Conread position:
               
59-324
               

               
Cow position:
               
chr2:68877095-68876834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
117, 8
               

               
Conread position:
               
59-391
               

               
Cow position:
               
chr2:30112979-30112627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
94, 88
               

               
Conread position:
               
59-411
               

               
Cow position:
               
chr2:69581542-69581916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
59-464
               

               
Cow position:
               
chr2:52171221-52170801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
60-267
               

               
Cow position:
               
chr2:85281155-85281359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
60-279
               

               
Cow position:
               
chr2:71163752-71163970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
60-285
               

               
Cow position:
               
chr2:841126-840895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
60-392
               

               
Cow position:
               
chr2:36318415-36318767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
61-264
               

               
Cow position:
               
chr2:36630934-36630726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
61-264
               

               
Cow position:
               
chr2:73282595-73282801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
61-264
               

               
Cow position:
               
chr2:80903966-80904168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
61-270
               

               
Cow position:
               
chr2:42938338-42938549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 78
               

               
Conread position:
               
63-213
               

               
Cow position:
               
chr2:41443364-41443213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
63-245
               

               
Cow position:
               
chr2:6232569-6232393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
63-254
               

               
Cow position:
               
chr2:32406640-32406450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
63-264
               

               
Cow position:
               
chr2:34492394-34492201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
63-285
               

               
Cow position:
               
chr2:42599891-42599665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
64-213
               

               
Cow position:
               
chr2:47152575-47152731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
64-241
               

               
Cow position:
               
chr2:79404060-79403880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
65-264
               

               
Cow position:
               
chr2:16693112-16692913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
65-471
               

               
Cow position:
               
chr2:34571506-34571934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 370
               

               
Conread position:
               
66-264
               

               
Cow position:
               
chr2:73985060-73985264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
67-250
               

               
Cow position:
               
chr2:56002969-56002785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
67-262
               

               
Cow position:
               
chr2:14884239-14884044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
121, 72
               

               
Conread position:
               
67-285
               

               
Cow position:
               
chr2:46734412-46734193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
68-270
               

               
Cow position:
               
chr2:32489456-32489648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
68-292
               

               
Cow position:
               
chr2:68084468-68084245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
70-259
               

               
Cow position:
               
chr2:24722494-24722680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
70-285
               

               
Cow position:
               
chr2:37072770-37072548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
70-434
               

               
Cow position:
               
chr2:47645005-47644634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
70-460
               

               
Cow position:
               
chr2:42667013-42667399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 170
               

               
Conread position:
               
72-391
               

               
Cow position:
               
chr2:54253301-54252971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
75-264
               

               
Cow position:
               
chr2:14349733-14349553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
177, 64
               

               
Conread position:
               
75-264
               

               
Cow position:
               
chr2:28285582-28285773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
107, 120
               

               
Conread position:
               
76-260
               

               
Cow position:
               
chr2:33497251-33497443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
77-464
               

               
Cow position:
               
chr2:53575049-53574671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
250, 104
               

               
Conread position:
               
78-344
               

               
Cow position:
               
chr2:39566730-39567016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
93, 225
               

               
Conread position:
               
79-264
               

               
Cow position:
               
chr2:37347743-37347557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
82-240
               

               
Cow position:
               
chr2:38795818-38795981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
82-264
               

               
Cow position:
               
chr2:1203625-1203437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
82-264
               

               
Cow position:
               
chr2:2689107-2688930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr2:50766427-50766239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
89-354
               

               
Cow position:
               
chr2:44065524-44065241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
95, 164
               

               
Conread position:
               
90-229
               

               
Cow position:
               
chr2:23301683-23301539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
90-229
               

               
Cow position:
               
chr2:31529444-31529304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
90-264
               

               
Cow position:
               
chr2:15216553-15216366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
90-287
               

               
Cow position:
               
chr2:17444724-17444527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
91-464
               

               
Cow position:
               
chr2:20855896-20856290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 94
               

               
Conread position:
               
92-464
               

               
Cow position:
               
chr2:31783867-31783484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
96-264
               

               
Cow position:
               
chr2:80177835-80178006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
106-256
               

               
Cow position:
               
chr2:39663317-39663160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
280-464
               

               
Cow position:
               
chr2:19287839-19288022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
140, 0
               
Show alignments to all cow chromosomes.