Cow genome map

Conread name: Tra1-TCH01G050069

Conread position: 12-903
Cow position:
Alignm length: 915
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 9

Conread position: 13-396
Cow position:
Alignm length: 390
Alignm identity: 254
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 7

Conread position: 13-893
Cow position:
Alignm length: 911
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 7

Conread position: 23-872
Cow position:
Alignm length: 902
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 63

Conread position: 25-330
Cow position:
Alignm length: 309
Alignm identity: 197
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 61

Conread position: 28-356
Cow position:
Alignm length: 331
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 75

Conread position: 28-629
Cow position:
Alignm length: 622
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 74

Conread position: 28-657
Cow position:
Alignm length: 636
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 37

Conread position: 29-330
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 155, 37

Conread position: 30-542
Cow position:
Alignm length: 526
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 64

Conread position: 31-396
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 118, 35

Conread position: 31-727
Cow position:
Alignm length: 722
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 46

Conread position: 34-893
Cow position:
Alignm length: 883
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 60

Conread position: 36-903
Cow position:
Alignm length: 890
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 58

Conread position: 38-751
Cow position:
Alignm length: 727
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 39-902
Cow position:
Alignm length: 882
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 46

Conread position: 44-455
Cow position:
Alignm length: 423
Alignm identity: 270
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 145

Conread position: 70-340
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 116, 24

Conread position: 73-313
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 31

Conread position: 78-477
Cow position:
Alignm length: 404
Alignm identity: 279
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 24

Conread position: 92-511
Cow position:
Alignm length: 428
Alignm identity: 273
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 57

Conread position: 98-632
Cow position:
Alignm length: 552
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 39

Conread position: 99-359
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 40

Conread position: 102-493
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 229, 93

Conread position: 104-901
Cow position:
Alignm length: 815
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 111-771
Cow position:
Alignm length: 684
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 114-455
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 27

Conread position: 117-330
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 32, 44

Conread position: 122-315
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 129

Conread position: 136-903
Cow position:
Alignm length: 796
Alignm identity: 502
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 59

Conread position: 138-359
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 87

Conread position: 148-611
Cow position:
Alignm length: 482
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 92

Conread position: 149-470
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 37, 68

Conread position: 152-901
Cow position:
Alignm length: 768
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 33

Conread position: 153-820
Cow position:
Alignm length: 688
Alignm identity: 418
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 7, 79

Conread position: 154-531
Cow position:
Alignm length: 391
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 127

Conread position: 168-369
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 5

Conread position: 168-415
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 5

Conread position: 179-903
Cow position:
Alignm length: 754
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 184-903
Cow position:
Alignm length: 738
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 103

Conread position: 186-361
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 187-469
Cow position:
Alignm length: 292
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 14

Conread position: 191-903
Cow position:
Alignm length: 739
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 50

Conread position: 193-549
Cow position:
Alignm length: 364
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 23

Conread position: 199-605
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 17

Conread position: 203-887
Cow position:
Alignm length: 705
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 13

Conread position: 206-903
Cow position:
Alignm length: 713
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 22

Conread position: 207-903
Cow position:
Alignm length: 719
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 34

Conread position: 212-367
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 150, 29

Conread position: 212-784
Cow position:
Alignm length: 596
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 135

Conread position: 212-894
Cow position:
Alignm length: 702
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 131

Conread position: 215-903
Cow position:
Alignm length: 713
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 36

Conread position: 215-903
Cow position:
Alignm length: 707
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 26

Conread position: 215-903
Cow position:
Alignm length: 712
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 26

Conread position: 215-903
Cow position:
Alignm length: 710
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 26

Conread position: 215-903
Cow position:
Alignm length: 713
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 23

Conread position: 216-611
Cow position:
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 13

Conread position: 220-339
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 220-477
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 220-477
Cow position:
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 42

Conread position: 220-569
Cow position:
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 21

Conread position: 220-655
Cow position:
Alignm length: 443
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 21

Conread position: 220-841
Cow position:
Alignm length: 642
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 21

Conread position: 220-892
Cow position:
Alignm length: 695
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 21

Conread position: 220-901
Cow position:
Alignm length: 704
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 21

Conread position: 220-901
Cow position:
Alignm length: 702
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 220-903
Cow position:
Alignm length: 706
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 220-903
Cow position:
Alignm length: 706
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 30

Conread position: 220-903
Cow position:
Alignm length: 705
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 220-903
Cow position:
Alignm length: 719
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 21

Conread position: 220-903
Cow position:
Alignm length: 708
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 220-903
Cow position:
Alignm length: 706
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 126

Conread position: 220-903
Cow position:
Alignm length: 707
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 21

Conread position: 220-903
Cow position:
Alignm length: 701
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 31

Conread position: 221-356
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 20

Conread position: 221-768
Cow position:
Alignm length: 563
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 122

Conread position: 221-901
Cow position:
Alignm length: 697
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 29

Conread position: 221-903
Cow position:
Alignm length: 711
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 125

Conread position: 221-903
Cow position:
Alignm length: 694
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 9

Conread position: 221-903
Cow position:
Alignm length: 705
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 108

Conread position: 222-605
Cow position:
Alignm length: 391
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 36

Conread position: 222-608
Cow position:
Alignm length: 394
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 19

Conread position: 222-889
Cow position:
Alignm length: 694
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 9

Conread position: 222-901
Cow position:
Alignm length: 694
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 19

Conread position: 222-901
Cow position:
Alignm length: 700
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 101

Conread position: 222-901
Cow position:
Alignm length: 703
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 19

Conread position: 222-901
Cow position:
Alignm length: 697
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 28

Conread position: 222-903
Cow position:
Alignm length: 708
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 222-903
Cow position:
Alignm length: 704
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 9

Conread position: 222-903
Cow position:
Alignm length: 704
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 28

Conread position: 222-903
Cow position:
Alignm length: 704
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 124

Conread position: 222-903
Cow position:
Alignm length: 700
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 125

Conread position: 223-339
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 223-369
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 121

Conread position: 223-584
Cow position:
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-664
Cow position:
Alignm length: 457
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-669
Cow position:
Alignm length: 451
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 116

Conread position: 223-740
Cow position:
Alignm length: 535
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 119

Conread position: 223-872
Cow position:
Alignm length: 672
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 200

Conread position: 223-889
Cow position:
Alignm length: 688
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-894
Cow position:
Alignm length: 694
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 118

Conread position: 223-894
Cow position:
Alignm length: 698
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 223-894
Cow position:
Alignm length: 703
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 211

Conread position: 223-894
Cow position:
Alignm length: 698
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 199

Conread position: 223-897
Cow position:
Alignm length: 703
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 223-901
Cow position:
Alignm length: 718
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 119

Conread position: 223-901
Cow position:
Alignm length: 702
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 47

Conread position: 223-901
Cow position:
Alignm length: 702
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 18

Conread position: 223-901
Cow position:
Alignm length: 699
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 120

Conread position: 223-903
Cow position:
Alignm length: 701
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 199

Conread position: 224-903
Cow position:
Alignm length: 696
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 34

Conread position: 233-659
Cow position:
Alignm length: 440
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 196

Conread position: 234-456
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 122, 112

Conread position: 235-894
Cow position:
Alignm length: 684
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 235-894
Cow position:
Alignm length: 683
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 41

Conread position: 235-899
Cow position:
Alignm length: 687
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 109

Conread position: 235-903
Cow position:
Alignm length: 695
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 109

Conread position: 235-903
Cow position:
Alignm length: 702
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 117

Conread position: 241-556
Cow position:
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 181

Conread position: 241-664
Cow position:
Alignm length: 431
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 90

Conread position: 241-813
Cow position:
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 12

Conread position: 241-848
Cow position:
Alignm length: 629
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 241-894
Cow position:
Alignm length: 675
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 241-903
Cow position:
Alignm length: 685
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 244-894
Cow position:
Alignm length: 670
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 99

Conread position: 245-894
Cow position:
Alignm length: 670
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 98

Conread position: 245-894
Cow position:
Alignm length: 671
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 100

Conread position: 245-901
Cow position:
Alignm length: 673
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 94

Conread position: 246-903
Cow position:
Alignm length: 682
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 248-901
Cow position:
Alignm length: 674
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 83

Conread position: 249-556
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 98

Conread position: 257-894
Cow position:
Alignm length: 658
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 89

Conread position: 269-901
Cow position:
Alignm length: 652
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 47

Conread position: 275-812
Cow position:
Alignm length: 557
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 68

Conread position: 275-894
Cow position:
Alignm length: 641
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 275-902
Cow position:
Alignm length: 648
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 83

Conread position: 276-665
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 65

Conread position: 281-888
Cow position:
Alignm length: 621
Alignm identity: 388
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 283, 49

Conread position: 285-493
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 93, 132

Show alignments to all cow chromosomes.