Cow genome map
| Conread name: | Tra1-TCH01G050069 |
| Conread position: | 12-903 |
| Cow position: | chr1:88270100-88269217 (view UCSC Genome Browser custom track) |
| Alignm length: | 915 |
| Alignm identity: | 600 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 9 |
| Conread position: | 13-396 |
| Cow position: | chr1:5319268-5319635 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 7 |
| Conread position: | 13-893 |
| Cow position: | chr1:15026467-15027364 (view UCSC Genome Browser custom track) |
| Alignm length: | 911 |
| Alignm identity: | 618 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 7 |
| Conread position: | 23-872 |
| Cow position: | chr1:31418416-31417532 (view UCSC Genome Browser custom track) |
| Alignm length: | 902 |
| Alignm identity: | 650 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 63 |
| Conread position: | 25-330 |
| Cow position: | chr1:91445400-91445704 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 28-356 |
| Cow position: | chr1:44101240-44100917 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 75 |
| Conread position: | 28-629 |
| Cow position: | chr1:33389248-33389861 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 74 |
| Conread position: | 28-657 |
| Cow position: | chr1:77111884-77111275 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 37 |
| Conread position: | 29-330 |
| Cow position: | chr1:25886620-25886335 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 155, 37 |
| Conread position: | 30-542 |
| Cow position: | chr1:40512920-40512410 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 64 |
| Conread position: | 31-396 |
| Cow position: | chr1:21720342-21720703 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 118, 35 |
| Conread position: | 31-727 |
| Cow position: | chr1:29033248-29033954 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 46 |
| Conread position: | 34-893 |
| Cow position: | chr1:63501984-63502832 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 36-903 |
| Cow position: | chr1:67286967-67287835 (view UCSC Genome Browser custom track) |
| Alignm length: | 890 |
| Alignm identity: | 635 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 58 |
| Conread position: | 38-751 |
| Cow position: | chr1:46836106-46836800 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 11 |
| Conread position: | 39-902 |
| Cow position: | chr1:29609526-29608674 (view UCSC Genome Browser custom track) |
| Alignm length: | 882 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 46 |
| Conread position: | 44-455 |
| Cow position: | chr1:78361282-78361693 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 145 |
| Conread position: | 70-340 |
| Cow position: | chr1:29413975-29413708 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 73-313 |
| Cow position: | chr1:58179530-58179293 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 78-477 |
| Cow position: | chr1:22344109-22344485 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 92-511 |
| Cow position: | chr1:30059110-30059526 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 98-632 |
| Cow position: | chr1:9382358-9381819 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 99-359 |
| Cow position: | chr1:38387151-38386897 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 40 |
| Conread position: | 102-493 |
| Cow position: | chr1:31330189-31329801 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 229, 93 |
| Conread position: | 104-901 |
| Cow position: | chr1:98659682-98658896 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 133 |
| Conread position: | 111-771 |
| Cow position: | chr1:55321940-55321278 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 114-455 |
| Cow position: | chr1:33712287-33712617 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 117-330 |
| Cow position: | chr1:77656305-77656512 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 122-315 |
| Cow position: | chr1:59934364-59934566 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 136-903 |
| Cow position: | chr1:32661977-32662741 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 502 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 138-359 |
| Cow position: | chr1:86610069-86610288 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 148-611 |
| Cow position: | chr1:30518934-30519401 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 149-470 |
| Cow position: | chr1:31421328-31421013 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 152-901 |
| Cow position: | chr1:31811329-31812064 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 153-820 |
| Cow position: | chr1:56446064-56446735 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 418 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 79 |
| Conread position: | 154-531 |
| Cow position: | chr1:18013257-18012874 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 127 |
| Conread position: | 168-369 |
| Cow position: | chr1:97124083-97124274 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 5 |
| Conread position: | 168-415 |
| Cow position: | chr1:61309278-61309519 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 179-903 |
| Cow position: | chr1:63605502-63604759 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 184-903 |
| Cow position: | chr1:23052072-23052777 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 103 |
| Conread position: | 186-361 |
| Cow position: | chr1:45019592-45019421 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 187-469 |
| Cow position: | chr1:89770378-89770095 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 107, 14 |
| Conread position: | 191-903 |
| Cow position: | chr1:12061923-12061199 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 50 |
| Conread position: | 193-549 |
| Cow position: | chr1:74859527-74859887 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 199-605 |
| Cow position: | chr1:57366833-57366422 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 17 |
| Conread position: | 203-887 |
| Cow position: | chr1:76752350-76751653 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 13 |
| Conread position: | 206-903 |
| Cow position: | chr1:72186574-72185867 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 22 |
| Conread position: | 207-903 |
| Cow position: | chr1:58336141-58336852 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 34 |
| Conread position: | 212-367 |
| Cow position: | chr1:62853541-62853390 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 150, 29 |
| Conread position: | 212-784 |
| Cow position: | chr1:95239669-95240262 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 135 |
| Conread position: | 212-894 |
| Cow position: | chr1:85791990-85792682 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 131 |
| Conread position: | 215-903 |
| Cow position: | chr1:42736766-42737472 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 36 |
| Conread position: | 215-903 |
| Cow position: | chr1:65386642-65387334 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 26 |
| Conread position: | 215-903 |
| Cow position: | chr1:76545224-76544521 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 215-903 |
| Cow position: | chr1:94659996-94660689 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 26 |
| Conread position: | 215-903 |
| Cow position: | chr1:99913731-99914440 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 23 |
| Conread position: | 216-611 |
| Cow position: | chr1:18027454-18027048 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 13 |
| Conread position: | 220-339 |
| Cow position: | chr1:57568271-57568390 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-477 |
| Cow position: | chr1:72981586-72981843 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-477 |
| Cow position: | chr1:85780461-85780204 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 42 |
| Conread position: | 220-569 |
| Cow position: | chr1:85882321-85882665 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 220-655 |
| Cow position: | chr1:69403299-69403738 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 21 |
| Conread position: | 220-841 |
| Cow position: | chr1:79456653-79456019 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 21 |
| Conread position: | 220-892 |
| Cow position: | chr1:91892804-91892117 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 21 |
| Conread position: | 220-901 |
| Cow position: | chr1:30534705-30534009 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 220-901 |
| Cow position: | chr1:88131090-88131785 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr1:21999638-21998940 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr1:28873393-28874095 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 30 |
| Conread position: | 220-903 |
| Cow position: | chr1:33551243-33551941 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr1:52358958-52358244 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 21 |
| Conread position: | 220-903 |
| Cow position: | chr1:62244328-62243629 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 220-903 |
| Cow position: | chr1:71562261-71561558 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 126 |
| Conread position: | 220-903 |
| Cow position: | chr1:73070737-73070044 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 220-903 |
| Cow position: | chr1:93854840-93855531 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 221-356 |
| Cow position: | chr1:56193613-56193479 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 221-768 |
| Cow position: | chr1:40053668-40054228 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 122 |
| Conread position: | 221-901 |
| Cow position: | chr1:56144017-56143325 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 29 |
| Conread position: | 221-903 |
| Cow position: | chr1:17012426-17011719 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 125 |
| Conread position: | 221-903 |
| Cow position: | chr1:40684378-40683725 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 221-903 |
| Cow position: | chr1:86547822-86547127 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 108 |
| Conread position: | 222-605 |
| Cow position: | chr1:86698897-86698513 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 36 |
| Conread position: | 222-608 |
| Cow position: | chr1:58883747-58883358 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 222-889 |
| Cow position: | chr1:8554641-8555327 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 222-901 |
| Cow position: | chr1:3385700-3385013 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 222-901 |
| Cow position: | chr1:8825370-8826059 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 101 |
| Conread position: | 222-901 |
| Cow position: | chr1:48246165-48246848 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 222-901 |
| Cow position: | chr1:72081099-72081778 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 222-903 |
| Cow position: | chr1:25179710-25179014 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 222-903 |
| Cow position: | chr1:28711229-28711906 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 9 |
| Conread position: | 222-903 |
| Cow position: | chr1:49973870-49973173 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 28 |
| Conread position: | 222-903 |
| Cow position: | chr1:69922118-69921420 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 124 |
| Conread position: | 222-903 |
| Cow position: | chr1:82923859-82923173 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 125 |
| Conread position: | 223-339 |
| Cow position: | chr1:87207107-87206990 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 223-369 |
| Cow position: | chr1:69537218-69537364 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 223-584 |
| Cow position: | chr1:20829204-20829570 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-664 |
| Cow position: | chr1:91899311-91899765 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-669 |
| Cow position: | chr1:97226390-97225944 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 116 |
| Conread position: | 223-740 |
| Cow position: | chr1:102549556-102550069 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 223-872 |
| Cow position: | chr1:39544084-39544748 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 200 |
| Conread position: | 223-889 |
| Cow position: | chr1:40574528-40575212 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-894 |
| Cow position: | chr1:21087728-21088417 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 118 |
| Conread position: | 223-894 |
| Cow position: | chr1:80358866-80358173 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 123 |
| Conread position: | 223-894 |
| Cow position: | chr1:82652968-82653667 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 211 |
| Conread position: | 223-894 |
| Cow position: | chr1:82912829-82912134 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 199 |
| Conread position: | 223-897 |
| Cow position: | chr1:67834826-67834128 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 123 |
| Conread position: | 223-901 |
| Cow position: | chr1:56723469-56724181 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 119 |
| Conread position: | 223-901 |
| Cow position: | chr1:57424524-57423830 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 47 |
| Conread position: | 223-901 |
| Cow position: | chr1:68607221-68606530 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 223-901 |
| Cow position: | chr1:69766777-69767465 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-903 |
| Cow position: | chr1:11291791-11291099 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 199 |
| Conread position: | 224-903 |
| Cow position: | chr1:17941465-17940783 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 34 |
| Conread position: | 233-659 |
| Cow position: | chr1:31403170-31402735 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 196 |
| Conread position: | 234-456 |
| Cow position: | chr1:30283217-30282993 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 122, 112 |
| Conread position: | 235-894 |
| Cow position: | chr1:31397016-31397695 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 235-894 |
| Cow position: | chr1:53198875-53199541 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 235-899 |
| Cow position: | chr1:5355452-5356135 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 235-903 |
| Cow position: | chr1:29362622-29363308 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 235-903 |
| Cow position: | chr1:33851603-33852302 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 241-556 |
| Cow position: | chr1:18880060-18879741 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 181 |
| Conread position: | 241-664 |
| Cow position: | chr1:17036224-17035798 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 241-813 |
| Cow position: | chr1:34692565-34693123 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 12 |
| Conread position: | 241-848 |
| Cow position: | chr1:82564836-82565457 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 102 |
| Conread position: | 241-894 |
| Cow position: | chr1:56490183-56490854 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 102 |
| Conread position: | 241-903 |
| Cow position: | chr1:89425906-89426586 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 102 |
| Conread position: | 244-894 |
| Cow position: | chr1:60339641-60340303 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 99 |
| Conread position: | 245-894 |
| Cow position: | chr1:13450543-13451208 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 98 |
| Conread position: | 245-894 |
| Cow position: | chr1:66999363-67000014 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 100 |
| Conread position: | 245-901 |
| Cow position: | chr1:31365746-31365086 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 94 |
| Conread position: | 246-903 |
| Cow position: | chr1:43985740-43985066 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 248-901 |
| Cow position: | chr1:43571062-43570404 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 83 |
| Conread position: | 249-556 |
| Cow position: | chr1:24651625-24651940 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 257-894 |
| Cow position: | chr1:59209802-59209146 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 89 |
| Conread position: | 269-901 |
| Cow position: | chr1:56163911-56164559 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 275-812 |
| Cow position: | chr1:52325766-52325232 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 68 |
| Conread position: | 275-894 |
| Cow position: | chr1:5502338-5502971 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 275-902 |
| Cow position: | chr1:26518514-26517875 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 276-665 |
| Cow position: | chr1:28278340-28278734 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 281-888 |
| Cow position: | chr1:91598286-91597701 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 388 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 283, 49 |
| Conread position: | 285-493 |
| Cow position: | chr1:18242956-18242750 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 93, 132 |
Show alignments to all cow chromosomes.