Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               1-409
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               1-771
               

               Cow position:
               
               

               Alignm length:
               788
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               3-330
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               183, 9
               

               Conread position:
               20-464
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 74
               

               Conread position:
               26-237
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               122, 67
               

               Conread position:
               30-231
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               119, 46
               

               Conread position:
               30-903
               

               Cow position:
               
               

               Alignm length:
               906
               

               Alignm identity:
               664
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               31-592
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               32-611
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               48-247
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               138, 46
               

               Conread position:
               48-247
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               138, 46
               

               Conread position:
               62-437
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 32
               

               Conread position:
               82-459
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               272, 23
               

               Conread position:
               92-508
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               101-903
               

               Cow position:
               
               

               Alignm length:
               835
               

               Alignm identity:
               623
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               110-664
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 93
               

               Conread position:
               114-901
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               117-365
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               117-545
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               294
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               65, 133
               

               Conread position:
               133-327
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 114
               

               Conread position:
               133-547
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               38, 113
               

               Conread position:
               149-498
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 175
               

               Conread position:
               149-545
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 89
               

               Conread position:
               158-329
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               26, 87
               

               Conread position:
               168-339
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 5
               

               Conread position:
               168-369
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               168-893
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 15
               

               Conread position:
               183-523
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 33
               

               Conread position:
               196-361
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               199-901
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               216-901
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               220-356
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               220-356
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-902
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               221-444
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               157, 20
               

               Conread position:
               221-464
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               133, 110
               

               Conread position:
               221-735
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               221-735
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 20
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 20
               

               Conread position:
               222-356
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               223-369
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               223-537
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 100
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 130
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 640
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 123
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 18
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 94
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 87
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               224-901
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 17
               

               Conread position:
               230-901
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 11
               

               Conread position:
               231-903
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 86
               

               Conread position:
               235-493
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               235-572
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               241-894
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               244-903
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 95
               

               Conread position:
               246-893
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 54
               

               Conread position:
               257-669
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 89
               

               Conread position:
               258-537
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               259-731
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 20
               

               Conread position:
               264-530
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               268-894
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               274-485
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               80, 69
               

               Conread position:
               282-512
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               98, 140
               

               Conread position:
               282-903
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               284-635
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               96, 123
               
Show alignments to all cow chromosomes.