Cow genome map
Conread name: | Tra1-TCH01G050069 |
Conread position: | 1-409 |
Cow position: | chr10:15860775-15860390 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 290 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 19, 88 |
Conread position: | 1-771 |
Cow position: | chr10:31524228-31524980 (view UCSC Genome Browser custom track) |
Alignm length: | 788 |
Alignm identity: | 564 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 22 |
Conread position: | 3-330 |
Cow position: | chr10:46191847-46192151 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 240 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 183, 9 |
Conread position: | 20-464 |
Cow position: | chr10:28931251-28930805 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 74 |
Conread position: | 26-237 |
Cow position: | chr10:33347168-33347381 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 168 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 122, 67 |
Conread position: | 30-231 |
Cow position: | chr10:42629103-42629308 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 119, 46 |
Conread position: | 30-903 |
Cow position: | chr10:38545750-38544881 (view UCSC Genome Browser custom track) |
Alignm length: | 906 |
Alignm identity: | 664 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 65 |
Conread position: | 31-592 |
Cow position: | chr10:14861412-14861962 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 42 |
Conread position: | 32-611 |
Cow position: | chr10:3543070-3542496 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 26 |
Conread position: | 48-247 |
Cow position: | chr10:13364347-13364144 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 138, 46 |
Conread position: | 48-247 |
Cow position: | chr10:13365537-13365334 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 148 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 138, 46 |
Conread position: | 62-437 |
Cow position: | chr10:38847900-38848270 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 32 |
Conread position: | 82-459 |
Cow position: | chr10:44294694-44294338 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 262 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 272, 23 |
Conread position: | 92-508 |
Cow position: | chr10:21900569-21900152 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 16 |
Conread position: | 101-903 |
Cow position: | chr10:26596825-26597650 (view UCSC Genome Browser custom track) |
Alignm length: | 835 |
Alignm identity: | 623 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 72 |
Conread position: | 110-664 |
Cow position: | chr10:38403953-38403406 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 93 |
Conread position: | 114-901 |
Cow position: | chr10:22101477-22102272 (view UCSC Genome Browser custom track) |
Alignm length: | 811 |
Alignm identity: | 589 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 27 |
Conread position: | 117-365 |
Cow position: | chr10:20370982-20370748 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 183 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 68, 31 |
Conread position: | 117-545 |
Cow position: | chr10:41775002-41774571 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 294 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 65, 133 |
Conread position: | 133-327 |
Cow position: | chr10:42749017-42749218 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 149 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 20, 114 |
Conread position: | 133-547 |
Cow position: | chr10:41388861-41388439 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 279 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 38, 113 |
Conread position: | 149-498 |
Cow position: | chr10:21077158-21077511 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 248 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 36, 175 |
Conread position: | 149-545 |
Cow position: | chr10:289094-288690 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 269 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 31, 89 |
Conread position: | 158-329 |
Cow position: | chr10:42110609-42110785 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 26, 87 |
Conread position: | 168-339 |
Cow position: | chr10:62778647-62778810 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 79, 5 |
Conread position: | 168-369 |
Cow position: | chr10:34686193-34686389 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 145 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 68, 8 |
Conread position: | 168-893 |
Cow position: | chr10:24977471-24976742 (view UCSC Genome Browser custom track) |
Alignm length: | 742 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 15 |
Conread position: | 183-523 |
Cow position: | chr10:17432951-17432614 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 33 |
Conread position: | 196-361 |
Cow position: | chr10:8339714-8339879 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 134 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 32, 16 |
Conread position: | 199-901 |
Cow position: | chr10:30685190-30684478 (view UCSC Genome Browser custom track) |
Alignm length: | 724 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 23 |
Conread position: | 215-903 |
Cow position: | chr10:8290316-8291016 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 535 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 26 |
Conread position: | 216-901 |
Cow position: | chr10:19511943-19512625 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 26 |
Conread position: | 220-356 |
Cow position: | chr10:25359742-25359876 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 109 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 220-356 |
Cow position: | chr10:32651076-32651209 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 220-901 |
Cow position: | chr10:16925878-16926563 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 220-902 |
Cow position: | chr10:21487258-21487954 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 220-903 |
Cow position: | chr10:39040959-39040270 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 21 |
Conread position: | 220-903 |
Cow position: | chr10:57989651-57988959 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 21 |
Conread position: | 220-903 |
Cow position: | chr10:62408508-62407806 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 21 |
Conread position: | 221-444 |
Cow position: | chr10:10582147-10582367 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 165 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 157, 20 |
Conread position: | 221-464 |
Cow position: | chr10:54978909-54978675 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 183 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 133, 110 |
Conread position: | 221-735 |
Cow position: | chr10:5849290-5848763 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 125 |
Conread position: | 221-735 |
Cow position: | chr10:56065009-56065537 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 122 |
Conread position: | 221-901 |
Cow position: | chr10:38345017-38344325 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 20 |
Conread position: | 221-903 |
Cow position: | chr10:38538160-38537463 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 20 |
Conread position: | 222-356 |
Cow position: | chr10:124654-124787 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 101 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 223-369 |
Cow position: | chr10:62216952-62217097 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 13, 121 |
Conread position: | 223-537 |
Cow position: | chr10:25564920-25564605 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 100 |
Conread position: | 223-894 |
Cow position: | chr10:41157785-41158468 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 130 |
Conread position: | 223-894 |
Cow position: | chr10:55093603-55094293 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 640 |
Conread position: | 223-901 |
Cow position: | chr10:21400333-21399638 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 123 |
Conread position: | 223-903 |
Cow position: | chr10:7281749-7281053 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 529 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 18 |
Conread position: | 223-903 |
Cow position: | chr10:14804174-14804881 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 94 |
Conread position: | 223-903 |
Cow position: | chr10:39180121-39180826 (view UCSC Genome Browser custom track) |
Alignm length: | 710 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 87 |
Conread position: | 223-903 |
Cow position: | chr10:41567440-41568137 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 120 |
Conread position: | 224-901 |
Cow position: | chr10:29846305-29845613 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 17 |
Conread position: | 230-901 |
Cow position: | chr10:2120660-2119978 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 11 |
Conread position: | 231-903 |
Cow position: | chr10:280277-279570 (view UCSC Genome Browser custom track) |
Alignm length: | 711 |
Alignm identity: | 532 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 86 |
Conread position: | 235-493 |
Cow position: | chr10:32578637-32578896 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 69 |
Conread position: | 235-572 |
Cow position: | chr10:51952273-51951934 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 112 |
Conread position: | 235-894 |
Cow position: | chr10:41877267-41877944 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 63 |
Conread position: | 235-903 |
Cow position: | chr10:21740403-21739712 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 109 |
Conread position: | 235-903 |
Cow position: | chr10:28641888-28642571 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 109 |
Conread position: | 241-894 |
Cow position: | chr10:19495930-19495254 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 105 |
Conread position: | 244-903 |
Cow position: | chr10:11698602-11699281 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 95 |
Conread position: | 246-893 |
Cow position: | chr10:11821128-11821779 (view UCSC Genome Browser custom track) |
Alignm length: | 671 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 54 |
Conread position: | 257-669 |
Cow position: | chr10:4191866-4191458 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 89 |
Conread position: | 258-537 |
Cow position: | chr10:64287980-64287692 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 197 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 113, 23 |
Conread position: | 259-731 |
Cow position: | chr10:19715187-19714705 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 20 |
Conread position: | 264-530 |
Cow position: | chr10:37770752-37771022 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 10 |
Conread position: | 268-894 |
Cow position: | chr10:47907313-47907957 (view UCSC Genome Browser custom track) |
Alignm length: | 648 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 75 |
Conread position: | 274-485 |
Cow position: | chr10:39816097-39815886 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 160 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 80, 69 |
Conread position: | 282-512 |
Cow position: | chr10:60193074-60193303 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 165 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 98, 140 |
Conread position: | 282-903 |
Cow position: | chr10:14335444-14334811 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 64 |
Conread position: | 284-635 |
Cow position: | chr10:41632039-41632382 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 244 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 96, 123 |
Show alignments to all cow chromosomes.