Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               11-610
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               167, 13
               

               Conread position:
               30-903
               

               Cow position:
               
               

               Alignm length:
               905
               

               Alignm identity:
               674
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 64
               

               Conread position:
               46-338
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               46-362
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               127, 28
               

               Conread position:
               46-628
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 48
               

               Conread position:
               73-477
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               77-363
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               104-604
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               114-367
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               118-896
               

               Cow position:
               
               

               Alignm length:
               813
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               121-703
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 317
               

               Conread position:
               122-383
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               125-493
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               61, 118
               

               Conread position:
               149-766
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 97
               

               Conread position:
               150-369
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               24, 38
               

               Conread position:
               150-903
               

               Cow position:
               
               

               Alignm length:
               787
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 196
               

               Conread position:
               151-536
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               155-893
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 56
               

               Conread position:
               157-356
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 193
               

               Conread position:
               167-769
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               168-369
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               168-902
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 5
               

               Conread position:
               183-363
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               183-469
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               203-903
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 13
               

               Conread position:
               212-901
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 211
               

               Conread position:
               215-903
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 26
               

               Conread position:
               216-901
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               217-596
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 80
               

               Conread position:
               220-669
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               220-887
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 80
               

               Conread position:
               220-889
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 60
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 22
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-361
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               136, 125
               

               Conread position:
               221-489
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               134, 25
               

               Conread position:
               221-611
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 126
               

               Conread position:
               221-669
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-893
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-899
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-901
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 20
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               222-504
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               222-544
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 28
               

               Conread position:
               222-869
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               222-893
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 121
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 57
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               223-669
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 56
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 123
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-896
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 121
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 123
               

               Conread position:
               233-551
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 110
               

               Conread position:
               234-889
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 21
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               241-453
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               102, 89
               

               Conread position:
               241-738
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 105
               

               Conread position:
               241-893
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 139
               

               Conread position:
               241-894
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 190
               

               Conread position:
               241-894
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               241-899
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               241-901
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 68
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 103
               

               Conread position:
               246-527
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 77
               

               Conread position:
               246-642
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 104
               

               Conread position:
               265-903
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 81
               

               Conread position:
               272-772
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 107
               

               Conread position:
               273-894
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 73
               

               Conread position:
               274-488
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               280-901
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 63
               

               Conread position:
               286-894
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               293-894
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               294-863
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               297-903
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 49
               
Show alignments to all cow chromosomes.