Cow genome map
| Conread name: | Tra1-TCH01G050069 |
| Conread position: | 32-728 |
| Cow position: | chr12:348482-349196 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 467 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 152, 58 |
| Conread position: | 40-852 |
| Cow position: | chr12:1869358-1870186 (view UCSC Genome Browser custom track) |
| Alignm length: | 849 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 197 |
| Conread position: | 47-468 |
| Cow position: | chr12:21500557-21500968 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 92-330 |
| Cow position: | chr12:1138251-1138485 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 104-401 |
| Cow position: | chr12:369773-370071 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 76, 113 |
| Conread position: | 173-837 |
| Cow position: | chr12:8197427-8198111 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 172 |
| Conread position: | 187-328 |
| Cow position: | chr12:5861408-5861548 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 198-903 |
| Cow position: | chr12:21198208-21198924 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 23 |
| Conread position: | 206-339 |
| Cow position: | chr12:21902195-21902326 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 215-903 |
| Cow position: | chr12:22205485-22204780 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 26 |
| Conread position: | 220-670 |
| Cow position: | chr12:27932677-27932208 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 220-895 |
| Cow position: | chr12:28765754-28765065 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 220-903 |
| Cow position: | chr12:1402758-1403456 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 21 |
| Conread position: | 221-339 |
| Cow position: | chr12:251793-251676 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 221-493 |
| Cow position: | chr12:33986423-33986696 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 221-837 |
| Cow position: | chr12:4157638-4158272 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 221-848 |
| Cow position: | chr12:25100792-25100151 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 20 |
| Conread position: | 222-633 |
| Cow position: | chr12:42859558-42859143 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 222-903 |
| Cow position: | chr12:11098512-11099198 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 223-620 |
| Cow position: | chr12:37558819-37559215 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 223-894 |
| Cow position: | chr12:32653807-32654489 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 120 |
| Conread position: | 224-369 |
| Cow position: | chr12:8311452-8311594 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 138, 22 |
| Conread position: | 224-894 |
| Cow position: | chr12:6406379-6405690 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 224-894 |
| Cow position: | chr12:14662362-14661676 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 114 |
| Conread position: | 234-508 |
| Cow position: | chr12:16821749-16822028 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 109 |
| Conread position: | 234-518 |
| Cow position: | chr12:21426968-21427255 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 235-511 |
| Cow position: | chr12:21254382-21254108 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 111 |
| Conread position: | 235-903 |
| Cow position: | chr12:43031111-43030422 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 244-903 |
| Cow position: | chr12:3361188-3361889 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 188 |
Show alignments to all cow chromosomes.