Cow genome map
| Conread name: | Tra1-TCH01G050069 |
| Conread position: | 5-266 |
| Cow position: | chr14:12609314-12609571 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 127, 18 |
| Conread position: | 10-903 |
| Cow position: | chr14:44257281-44256359 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 640 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 28-608 |
| Cow position: | chr14:47654888-47655449 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 61 |
| Conread position: | 28-893 |
| Cow position: | chr14:44776340-44775430 (view UCSC Genome Browser custom track) |
| Alignm length: | 919 |
| Alignm identity: | 616 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 30-213 |
| Cow position: | chr14:17764728-17764543 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 139, 63 |
| Conread position: | 30-903 |
| Cow position: | chr14:44377544-44378416 (view UCSC Genome Browser custom track) |
| Alignm length: | 896 |
| Alignm identity: | 655 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 64 |
| Conread position: | 32-511 |
| Cow position: | chr14:35387087-35386597 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 38-894 |
| Cow position: | chr14:38146730-38147616 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 616 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 31 |
| Conread position: | 56-611 |
| Cow position: | chr14:9101954-9101405 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 38 |
| Conread position: | 57-471 |
| Cow position: | chr14:37457651-37457234 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 37 |
| Conread position: | 93-495 |
| Cow position: | chr14:37413653-37413245 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 238 |
| Conread position: | 94-266 |
| Cow position: | chr14:48824975-48825149 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 104-475 |
| Cow position: | chr14:14308762-14308379 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 211 |
| Conread position: | 117-470 |
| Cow position: | chr14:33341949-33342305 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 117-782 |
| Cow position: | chr14:45303135-45302482 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 160 |
| Conread position: | 117-901 |
| Cow position: | chr14:44581180-44581967 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 118-856 |
| Cow position: | chr14:13302843-13303591 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 118-894 |
| Cow position: | chr14:41474920-41475724 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 5 |
| Conread position: | 122-558 |
| Cow position: | chr14:38815988-38815540 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 122-783 |
| Cow position: | chr14:41408701-41409358 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 133-897 |
| Cow position: | chr14:30706447-30705715 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 63 |
| Conread position: | 149-901 |
| Cow position: | chr14:46529075-46529839 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 168-369 |
| Cow position: | chr14:23690350-23690158 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 5 |
| Conread position: | 171-889 |
| Cow position: | chr14:48970558-48971280 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 15 |
| Conread position: | 202-489 |
| Cow position: | chr14:46464982-46465281 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 176, 11 |
| Conread position: | 203-901 |
| Cow position: | chr14:17760995-17760265 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 143 |
| Conread position: | 206-435 |
| Cow position: | chr14:16919781-16919554 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 151, 35 |
| Conread position: | 206-901 |
| Cow position: | chr14:20782367-20783074 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 15 |
| Conread position: | 207-608 |
| Cow position: | chr14:37223811-37224214 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 34 |
| Conread position: | 207-901 |
| Cow position: | chr14:17001152-17000444 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 34 |
| Conread position: | 215-901 |
| Cow position: | chr14:5511740-5512439 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 220-356 |
| Cow position: | chr14:15276657-15276523 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 220-894 |
| Cow position: | chr14:5528985-5529679 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 38 |
| Conread position: | 220-894 |
| Cow position: | chr14:13778878-13779547 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 220-894 |
| Cow position: | chr14:48254382-48253703 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 220-903 |
| Cow position: | chr14:11154243-11153540 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr14:17685319-17686017 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr14:19328345-19327649 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr14:22031502-22030828 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 125 |
| Conread position: | 221-395 |
| Cow position: | chr14:23900884-23900709 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 137, 125 |
| Conread position: | 221-415 |
| Cow position: | chr14:28993930-28993736 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 136, 29 |
| Conread position: | 221-441 |
| Cow position: | chr14:46474762-46474981 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 221-669 |
| Cow position: | chr14:50110489-50110944 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 222-889 |
| Cow position: | chr14:45161021-45161693 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 117 |
| Conread position: | 222-901 |
| Cow position: | chr14:7472293-7472972 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 29 |
| Conread position: | 222-901 |
| Cow position: | chr14:44551806-44552495 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 33 |
| Conread position: | 222-903 |
| Cow position: | chr14:12743143-12742449 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 222-903 |
| Cow position: | chr14:44226319-44227017 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 119 |
| Conread position: | 223-339 |
| Cow position: | chr14:7830615-7830498 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 223-375 |
| Cow position: | chr14:19620145-19620297 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 223-493 |
| Cow position: | chr14:29047985-29047714 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 121 |
| Conread position: | 223-592 |
| Cow position: | chr14:45712068-45711697 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 223-901 |
| Cow position: | chr14:9045484-9046190 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-901 |
| Cow position: | chr14:13864157-13863482 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 108 |
| Conread position: | 223-903 |
| Cow position: | chr14:17491538-17490841 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 123 |
| Conread position: | 223-903 |
| Cow position: | chr14:23257277-23257971 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-903 |
| Cow position: | chr14:30596459-30595747 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 224-649 |
| Cow position: | chr14:44685969-44686396 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 115 |
| Conread position: | 224-901 |
| Cow position: | chr14:16273370-16272681 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 122 |
| Conread position: | 224-903 |
| Cow position: | chr14:44287324-44286633 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 225-894 |
| Cow position: | chr14:45080972-45081658 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 94 |
| Conread position: | 234-595 |
| Cow position: | chr14:45029195-45028836 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 110 |
| Conread position: | 234-903 |
| Cow position: | chr14:45672116-45671429 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 168 |
| Conread position: | 235-889 |
| Cow position: | chr14:2284268-2284940 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 187 |
| Conread position: | 240-903 |
| Cow position: | chr14:30585017-30584340 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 70 |
| Conread position: | 241-903 |
| Cow position: | chr14:750506-751184 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 102 |
| Conread position: | 241-903 |
| Cow position: | chr14:33393843-33393169 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 245-477 |
| Cow position: | chr14:45834095-45834324 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 25 |
| Conread position: | 261-902 |
| Cow position: | chr14:12610419-12611066 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 268-640 |
| Cow position: | chr14:38531769-38531399 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 271-536 |
| Cow position: | chr14:34860653-34860923 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 274-493 |
| Cow position: | chr14:45917617-45917838 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 72, 149 |
| Conread position: | 274-901 |
| Cow position: | chr14:48825269-48825898 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 69 |
| Conread position: | 274-903 |
| Cow position: | chr14:45189795-45189161 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 65 |
| Conread position: | 275-652 |
| Cow position: | chr14:50138569-50138944 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 275-672 |
| Cow position: | chr14:29777527-29777123 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 71 |
| Conread position: | 280-891 |
| Cow position: | chr14:45206292-45206928 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 281-712 |
| Cow position: | chr14:30735282-30734846 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 58 |
Show alignments to all cow chromosomes.