Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               5-266
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               127, 18
               

               Conread position:
               10-903
               

               Cow position:
               
               

               Alignm length:
               940
               

               Alignm identity:
               640
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               28-608
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               28-893
               

               Cow position:
               
               

               Alignm length:
               919
               

               Alignm identity:
               616
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               30-213
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               139, 63
               

               Conread position:
               30-903
               

               Cow position:
               
               

               Alignm length:
               896
               

               Alignm identity:
               655
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 64
               

               Conread position:
               32-511
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 51
               

               Conread position:
               38-894
               

               Cow position:
               
               

               Alignm length:
               907
               

               Alignm identity:
               616
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 31
               

               Conread position:
               56-611
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 38
               

               Conread position:
               57-471
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 37
               

               Conread position:
               93-495
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 238
               

               Conread position:
               94-266
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               104-475
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 211
               

               Conread position:
               117-470
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               117-782
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 160
               

               Conread position:
               117-901
               

               Cow position:
               
               

               Alignm length:
               810
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 96
               

               Conread position:
               118-856
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               118-894
               

               Cow position:
               
               

               Alignm length:
               817
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 5
               

               Conread position:
               122-558
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               297
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               122-783
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 32
               

               Conread position:
               133-897
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 63
               

               Conread position:
               149-901
               

               Cow position:
               
               

               Alignm length:
               779
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 99
               

               Conread position:
               168-369
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 5
               

               Conread position:
               171-889
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 15
               

               Conread position:
               202-489
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               176, 11
               

               Conread position:
               203-901
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 143
               

               Conread position:
               206-435
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               151, 35
               

               Conread position:
               206-901
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 15
               

               Conread position:
               207-608
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 34
               

               Conread position:
               207-901
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               215-901
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 26
               

               Conread position:
               220-356
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               220-894
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 38
               

               Conread position:
               220-894
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               220-894
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 125
               

               Conread position:
               221-395
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               221-415
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               136, 29
               

               Conread position:
               221-441
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               137, 20
               

               Conread position:
               221-669
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 121
               

               Conread position:
               222-889
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 117
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 29
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 119
               

               Conread position:
               223-339
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               223-375
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               223-493
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 121
               

               Conread position:
               223-592
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 108
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               224-649
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 115
               

               Conread position:
               224-901
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 122
               

               Conread position:
               224-903
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               225-894
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 94
               

               Conread position:
               234-595
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               234-903
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 168
               

               Conread position:
               235-889
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 187
               

               Conread position:
               240-903
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 70
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 102
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               245-477
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               261-902
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               268-640
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 78
               

               Conread position:
               271-536
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 103
               

               Conread position:
               274-493
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               72, 149
               

               Conread position:
               274-901
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 69
               

               Conread position:
               274-903
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               275-652
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 50
               

               Conread position:
               275-672
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               280-891
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 63
               

               Conread position:
               281-712
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 58
               
Show alignments to all cow chromosomes.