Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               4-540
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               4-903
               

               Cow position:
               
               

               Alignm length:
               949
               

               Alignm identity:
               659
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               7-266
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               10-452
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               13-329
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               172, 7
               

               Conread position:
               13-375
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               28-857
               

               Cow position:
               
               

               Alignm length:
               854
               

               Alignm identity:
               613
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 42
               

               Conread position:
               30-281
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               152, 64
               

               Conread position:
               30-415
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               31-281
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               131, 63
               

               Conread position:
               41-491
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               148, 44
               

               Conread position:
               64-894
               

               Cow position:
               
               

               Alignm length:
               845
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               104-669
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 149
               

               Conread position:
               104-842
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               111-517
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 76
               

               Conread position:
               123-592
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 139
               

               Conread position:
               133-672
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 87
               

               Conread position:
               142-786
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               151-659
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               151-735
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 97
               

               Conread position:
               151-893
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               168-369
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               168-504
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               211, 5
               

               Conread position:
               168-523
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               168-894
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               172-889
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               182-669
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               484, 32
               

               Conread position:
               185-761
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               390
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               193-901
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               211-903
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 134
               

               Conread position:
               212-903
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               215-600
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 16
               

               Conread position:
               216-903
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 123
               

               Conread position:
               220-664
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 30
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-325
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-471
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-477
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-527
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               221-616
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 101
               

               Conread position:
               221-735
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 20
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 20
               

               Conread position:
               222-487
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               222-512
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 28
               

               Conread position:
               222-601
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 124
               

               Conread position:
               222-672
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 205
               

               Conread position:
               222-791
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 101
               

               Conread position:
               222-859
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 44
               

               Conread position:
               222-894
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 124
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 19
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 28
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 125
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               223-378
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               223-448
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               223-559
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 122
               

               Conread position:
               223-889
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 27
               

               Conread position:
               223-889
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 39
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 115
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 120
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               223-901
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 123
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 108
               

               Conread position:
               224-901
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 132
               

               Conread position:
               225-552
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 114
               

               Conread position:
               234-449
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               144, 21
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               235-901
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 110
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 110
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 106
               

               Conread position:
               240-901
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               241-493
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 105
               

               Conread position:
               241-803
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               241-880
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 109
               

               Conread position:
               241-902
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 102
               

               Conread position:
               250-808
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 93
               

               Conread position:
               267-903
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 76
               

               Conread position:
               272-891
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 71
               

               Conread position:
               273-903
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 149
               

               Conread position:
               274-816
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 67
               

               Conread position:
               280-889
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 63
               

               Conread position:
               287-901
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 59
               
Show alignments to all cow chromosomes.