Cow genome map

Conread name: Tra1-TCH01G050069

Conread position: 4-540
Cow position: chr15:24794071-24794595 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 4-903
Cow position: chr15:36626564-36625651 (view UCSC Genome Browser custom track)
Alignm length: 949
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 77

Conread position: 7-266
Cow position: chr15:23264784-23265039 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 22

Conread position: 10-452
Cow position: chr15:12615202-12615619 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 12, 20

Conread position: 13-329
Cow position: chr15:11298677-11298366 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 172, 7

Conread position: 13-375
Cow position: chr15:24716594-24716942 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 7

Conread position: 28-857
Cow position: chr15:9429683-9430512 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 42

Conread position: 30-281
Cow position: chr15:35648177-35647922 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 64

Conread position: 30-415
Cow position: chr15:36642672-36643052 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 65

Conread position: 31-281
Cow position: chr15:369622-369369 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 63

Conread position: 41-491
Cow position: chr15:9739898-9739456 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 288
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 148, 44

Conread position: 64-894
Cow position: chr15:21449468-21450271 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 70

Conread position: 104-669
Cow position: chr15:16507793-16508364 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 104-842
Cow position: chr15:40105676-40106397 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 13

Conread position: 111-517
Cow position: chr15:686733-687153 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 76

Conread position: 123-592
Cow position: chr15:11625424-11625899 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 139

Conread position: 133-672
Cow position: chr15:51714789-51715334 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 87

Conread position: 142-786
Cow position: chr15:35735420-35736080 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 14

Conread position: 151-659
Cow position: chr15:2413716-2413206 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 79

Conread position: 151-735
Cow position: chr15:6622941-6623531 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 97

Conread position: 151-893
Cow position: chr15:20357045-20356312 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 73

Conread position: 168-369
Cow position: chr15:10787248-10787056 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 5

Conread position: 168-504
Cow position: chr15:9912512-9912843 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 211, 5

Conread position: 168-523
Cow position: chr15:17218530-17218176 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 48

Conread position: 168-894
Cow position: chr15:19738173-19737439 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 5

Conread position: 172-889
Cow position: chr15:7966093-7965343 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 182-669
Cow position: chr15:32673660-32673187 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 32

Conread position: 185-761
Cow position: chr15:3842540-3841984 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 390
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 15, 47

Conread position: 193-901
Cow position: chr15:4961540-4962251 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 211-903
Cow position: chr15:8099400-8100090 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 134

Conread position: 212-903
Cow position: chr15:1772403-1773118 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 135

Conread position: 215-600
Cow position: chr15:4385187-4385568 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 16

Conread position: 216-903
Cow position: chr15:44828713-44829421 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 123

Conread position: 220-664
Cow position: chr15:42936638-42937079 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 30

Conread position: 220-901
Cow position: chr15:21665822-21665129 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 21

Conread position: 220-903
Cow position: chr15:7837168-7837870 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 220-903
Cow position: chr15:15347195-15346494 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 21

Conread position: 220-903
Cow position: chr15:31358810-31359497 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 21

Conread position: 221-325
Cow position: chr15:6553932-6553828 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 221-471
Cow position: chr15:29009757-29010008 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 133, 122

Conread position: 221-477
Cow position: chr15:36077165-36077422 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 133, 122

Conread position: 221-527
Cow position: chr15:48322734-48323038 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 23

Conread position: 221-616
Cow position: chr15:12421242-12420843 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 101

Conread position: 221-735
Cow position: chr15:1882588-1882060 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 125

Conread position: 221-903
Cow position: chr15:4142900-4142198 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 122

Conread position: 221-903
Cow position: chr15:24295021-24295718 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 20

Conread position: 221-903
Cow position: chr15:44069849-44070548 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 20

Conread position: 222-487
Cow position: chr15:41366095-41366358 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 88

Conread position: 222-512
Cow position: chr15:51216514-51216805 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 28

Conread position: 222-601
Cow position: chr15:35753672-35753284 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 124

Conread position: 222-672
Cow position: chr15:17292363-17292838 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 205

Conread position: 222-791
Cow position: chr15:1764015-1764593 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 101

Conread position: 222-859
Cow position: chr15:37392417-37393066 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 44

Conread position: 222-894
Cow position: chr15:8750351-8751011 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 124

Conread position: 222-901
Cow position: chr15:315934-315242 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 19

Conread position: 222-901
Cow position: chr15:2076574-2077275 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 28

Conread position: 222-903
Cow position: chr15:4671354-4672054 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 125

Conread position: 222-903
Cow position: chr15:4922076-4922769 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 19

Conread position: 222-903
Cow position: chr15:6156028-6155323 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 125

Conread position: 222-903
Cow position: chr15:18576640-18577331 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 222-903
Cow position: chr15:32494461-32493767 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 19

Conread position: 223-378
Cow position: chr15:4682157-4682311 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 223-448
Cow position: chr15:53338950-53339168 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 40

Conread position: 223-559
Cow position: chr15:7260553-7260886 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 223-889
Cow position: chr15:444528-445209 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 27

Conread position: 223-889
Cow position: chr15:7544808-7545467 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 39

Conread position: 223-894
Cow position: chr15:328353-329028 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 115

Conread position: 223-894
Cow position: chr15:1834541-1833847 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 21

Conread position: 223-894
Cow position: chr15:50146998-50147675 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 120

Conread position: 223-901
Cow position: chr15:524935-524242 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 223-901
Cow position: chr15:18268067-18267371 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 223-901
Cow position: chr15:50124022-50123327 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 123

Conread position: 223-903
Cow position: chr15:28490221-28489528 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 108

Conread position: 224-901
Cow position: chr15:10888532-10889231 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 132

Conread position: 225-552
Cow position: chr15:4765133-4765465 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 114

Conread position: 234-449
Cow position: chr15:2012013-2012227 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 144, 21

Conread position: 235-894
Cow position: chr15:1519219-1518545 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 112

Conread position: 235-901
Cow position: chr15:17080271-17079595 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 110

Conread position: 235-903
Cow position: chr15:2647725-2647035 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 110

Conread position: 235-903
Cow position: chr15:4196394-4197082 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 106

Conread position: 240-901
Cow position: chr15:7234242-7234874 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 34

Conread position: 241-493
Cow position: chr15:42320483-42320231 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 105

Conread position: 241-803
Cow position: chr15:36970862-36971435 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 102

Conread position: 241-880
Cow position: chr15:56424-57080 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 109

Conread position: 241-902
Cow position: chr15:3009913-3009236 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 102

Conread position: 250-808
Cow position: chr15:7894280-7893717 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 93

Conread position: 267-903
Cow position: chr15:5980326-5980968 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 76

Conread position: 272-891
Cow position: chr15:35647692-35647062 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 71

Conread position: 273-903
Cow position: chr15:3261358-3260698 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 149

Conread position: 274-816
Cow position: chr15:30810974-30811508 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 67

Conread position: 280-889
Cow position: chr15:4812585-4813203 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 63

Conread position: 287-901
Cow position: chr15:32720753-32720129 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 59

Show alignments to all cow chromosomes.