Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               10-290
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 86
               

               Conread position:
               20-212
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               20-471
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 45
               

               Conread position:
               20-770
               

               Cow position:
               
               

               Alignm length:
               762
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 62
               

               Conread position:
               28-259
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               156, 66
               

               Conread position:
               28-496
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 59
               

               Conread position:
               30-312
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               76, 63
               

               Conread position:
               30-519
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               30-604
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               30-657
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               32-894
               

               Cow position:
               
               

               Alignm length:
               902
               

               Alignm identity:
               656
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 57
               

               Conread position:
               33-894
               

               Cow position:
               
               

               Alignm length:
               905
               

               Alignm identity:
               672
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               36-604
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 58
               

               Conread position:
               70-338
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 24
               

               Conread position:
               105-590
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               331
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               79, 73
               

               Conread position:
               124-608
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               124-894
               

               Cow position:
               
               

               Alignm length:
               799
               

               Alignm identity:
               576
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               149-659
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 99
               

               Conread position:
               150-712
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               375
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               24, 103
               

               Conread position:
               168-369
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               183-849
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 93
               

               Conread position:
               187-903
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               193-475
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               203-608
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 13
               

               Conread position:
               203-903
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 13
               

               Conread position:
               206-370
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               212-903
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 134
               

               Conread position:
               216-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               220-591
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               220-633
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               220-871
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-872
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 124
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 31
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 18
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 20
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-584
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 122
               

               Conread position:
               221-600
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-889
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 20
               

               Conread position:
               221-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               222-629
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-893
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 89
               

               Conread position:
               222-894
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 124
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 97
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 124
               

               Conread position:
               223-356
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               223-362
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               114, 121
               

               Conread position:
               223-369
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 120
               

               Conread position:
               234-431
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               124, 110
               

               Conread position:
               235-580
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               235-627
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               235-889
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 83
               

               Conread position:
               241-893
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 46
               

               Conread position:
               241-894
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 90
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 98
               

               Conread position:
               269-664
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 5
               

               Conread position:
               271-490
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               274-600
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 62
               

               Conread position:
               275-903
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               283-811
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               285-878
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 61
               
Show alignments to all cow chromosomes.