Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               28-536
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 38
               

               Conread position:
               28-751
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 74
               

               Conread position:
               28-894
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               593
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 57
               

               Conread position:
               29-226
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               157, 117
               

               Conread position:
               29-250
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               31-642
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 25
               

               Conread position:
               48-470
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               55-903
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               618
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 15
               

               Conread position:
               149-735
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               167-820
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 6
               

               Conread position:
               168-369
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 5
               

               Conread position:
               173-903
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               556
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               193-903
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               204-666
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               215-894
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 26
               

               Conread position:
               215-901
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               216-373
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 124
               

               Conread position:
               216-443
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               135, 25
               

               Conread position:
               216-601
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 25
               

               Conread position:
               220-493
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 20
               

               Conread position:
               220-901
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 20
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-412
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-413
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 10
               

               Conread position:
               221-746
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 125
               

               Conread position:
               221-889
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 126
               

               Conread position:
               221-889
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 18
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 121
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 36
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 19
               

               Conread position:
               223-369
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               223-834
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 122
               

               Conread position:
               223-889
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 120
               

               Conread position:
               223-894
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 123
               

               Conread position:
               223-902
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 130
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 30
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 123
               

               Conread position:
               225-903
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               234-889
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 108
               

               Conread position:
               234-894
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 109
               

               Conread position:
               234-898
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 189
               

               Conread position:
               235-492
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               235-894
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 189
               

               Conread position:
               235-899
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               241-640
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               241-901
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 148
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               245-901
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               269-901
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 5
               

               Conread position:
               274-611
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 65
               

               Conread position:
               275-595
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 71
               

               Conread position:
               276-605
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               279-462
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 52
               
Show alignments to all cow chromosomes.