Cow genome map
| Conread name: | Tra1-TCH01G050069 |
| Conread position: | 29-289 |
| Cow position: | chr18:29237314-29237566 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 195, 64 |
| Conread position: | 93-262 |
| Cow position: | chr18:51275699-51275529 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 104-330 |
| Cow position: | chr18:36257198-36256970 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 108-512 |
| Cow position: | chr18:46868316-46867912 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 80, 187 |
| Conread position: | 117-600 |
| Cow position: | chr18:8168957-8169448 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 144 |
| Conread position: | 119-268 |
| Cow position: | chr18:16878361-16878512 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 121-507 |
| Cow position: | chr18:54003795-54004163 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 137-901 |
| Cow position: | chr18:54171263-54170481 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 152-620 |
| Cow position: | chr18:29765254-29765739 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 203 |
| Conread position: | 166-356 |
| Cow position: | chr18:24700796-24700616 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 168-358 |
| Cow position: | chr18:16534297-16534476 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 173-903 |
| Cow position: | chr18:33269148-33269879 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 13 |
| Conread position: | 203-894 |
| Cow position: | chr18:33750361-33751058 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 18 |
| Conread position: | 207-667 |
| Cow position: | chr18:27987413-27987882 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 34 |
| Conread position: | 215-894 |
| Cow position: | chr18:27837959-27837262 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 215-903 |
| Cow position: | chr18:25351106-25351814 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 216-903 |
| Cow position: | chr18:54023768-54023076 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 220-644 |
| Cow position: | chr18:51481197-51481624 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 21 |
| Conread position: | 220-901 |
| Cow position: | chr18:14416338-14417040 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 220-901 |
| Cow position: | chr18:16176255-16175561 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 220-901 |
| Cow position: | chr18:41840462-41839747 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 21 |
| Conread position: | 220-903 |
| Cow position: | chr18:32652565-32653275 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr18:36508695-36509400 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 220-903 |
| Cow position: | chr18:40478745-40479446 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 221-660 |
| Cow position: | chr18:22602843-22603285 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 221-901 |
| Cow position: | chr18:14130754-14131448 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 221-903 |
| Cow position: | chr18:33953219-33952523 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 125 |
| Conread position: | 222-603 |
| Cow position: | chr18:37505427-37505809 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 222-901 |
| Cow position: | chr18:33336226-33336922 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 124 |
| Conread position: | 222-903 |
| Cow position: | chr18:28973538-28972826 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 222-903 |
| Cow position: | chr18:52651283-52651970 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 49 |
| Conread position: | 223-369 |
| Cow position: | chr18:17992056-17991911 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 223-369 |
| Cow position: | chr18:51310943-51311089 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 235-784 |
| Cow position: | chr18:24040363-24039788 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 112 |
| Conread position: | 235-894 |
| Cow position: | chr18:19352751-19353406 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 235-903 |
| Cow position: | chr18:51342055-51342743 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 236-610 |
| Cow position: | chr18:15855765-15856145 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 241-889 |
| Cow position: | chr18:55088548-55087883 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 586 |
| Conread position: | 241-903 |
| Cow position: | chr18:11274730-11274049 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 105 |
| Conread position: | 241-903 |
| Cow position: | chr18:51462703-51462031 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 76 |
| Conread position: | 252-903 |
| Cow position: | chr18:16088539-16089197 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 91 |
| Conread position: | 259-903 |
| Cow position: | chr18:51660741-51661399 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 84 |
| Conread position: | 280-889 |
| Cow position: | chr18:54270929-54271537 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 284-531 |
| Cow position: | chr18:22385120-22385368 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 55 |
Show alignments to all cow chromosomes.