Cow genome map
| Conread name: | Tra1-TCH01G050069 |
| Conread position: | 13-892 |
| Cow position: | chr19:32182922-32182031 (view UCSC Genome Browser custom track) |
| Alignm length: | 915 |
| Alignm identity: | 595 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 20 |
| Conread position: | 20-608 |
| Cow position: | chr19:136860-136264 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 74 |
| Conread position: | 28-209 |
| Cow position: | chr19:44224759-44224579 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 169, 51 |
| Conread position: | 30-231 |
| Cow position: | chr19:44532624-44532833 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 30-497 |
| Cow position: | chr19:352472-352010 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 19 |
| Conread position: | 30-654 |
| Cow position: | chr19:162917-162308 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 39 |
| Conread position: | 30-903 |
| Cow position: | chr19:3138104-3138992 (view UCSC Genome Browser custom track) |
| Alignm length: | 906 |
| Alignm identity: | 666 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 123 |
| Conread position: | 32-308 |
| Cow position: | chr19:43193-43469 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 147, 62 |
| Conread position: | 32-396 |
| Cow position: | chr19:377403-377034 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 81-338 |
| Cow position: | chr19:32222796-32222536 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 99-901 |
| Cow position: | chr19:27052265-27051451 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 117-327 |
| Cow position: | chr19:35377418-35377635 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 131 |
| Conread position: | 117-767 |
| Cow position: | chr19:39669250-39668576 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 109 |
| Conread position: | 173-339 |
| Cow position: | chr19:28376813-28376974 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 186-901 |
| Cow position: | chr19:439108-438379 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 55 |
| Conread position: | 194-894 |
| Cow position: | chr19:75908-75216 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 19 |
| Conread position: | 204-555 |
| Cow position: | chr19:39698788-39699138 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 216-894 |
| Cow position: | chr19:341582-342271 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 220-894 |
| Cow position: | chr19:33941977-33942659 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 33 |
| Conread position: | 220-901 |
| Cow position: | chr19:28581294-28580602 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 21 |
| Conread position: | 220-903 |
| Cow position: | chr19:39185179-39184476 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 220-903 |
| Cow position: | chr19:39390875-39391571 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 221-433 |
| Cow position: | chr19:5208532-5208745 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 221-775 |
| Cow position: | chr19:172579-173138 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 20 |
| Conread position: | 222-761 |
| Cow position: | chr19:204324-204876 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 121 |
| Conread position: | 222-761 |
| Cow position: | chr19:7488681-7489229 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 222-768 |
| Cow position: | chr19:5729198-5729750 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 222-818 |
| Cow position: | chr19:893240-892628 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 124 |
| Conread position: | 222-903 |
| Cow position: | chr19:33873795-33874488 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 222-903 |
| Cow position: | chr19:40852070-40851388 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 121 |
| Conread position: | 223-358 |
| Cow position: | chr19:417029-417163 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 223-370 |
| Cow position: | chr19:32665891-32666038 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 223-556 |
| Cow position: | chr19:40817334-40817026 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 223-605 |
| Cow position: | chr19:28593626-28594008 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-903 |
| Cow position: | chr19:52151468-52150772 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 120 |
| Conread position: | 230-901 |
| Cow position: | chr19:2274009-2273326 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 11 |
| Conread position: | 234-464 |
| Cow position: | chr19:38268-38499 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 120, 109 |
| Conread position: | 235-894 |
| Cow position: | chr19:43144089-43144762 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 91 |
| Conread position: | 235-901 |
| Cow position: | chr19:772970-773657 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 108 |
| Conread position: | 235-901 |
| Cow position: | chr19:32211700-32211017 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 244-903 |
| Cow position: | chr19:20105087-20105787 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 276-765 |
| Cow position: | chr19:168185-167682 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 70 |
Show alignments to all cow chromosomes.