Cow genome map
| Conread name: | Tra1-TCH01G050069 |
| Conread position: | 13-903 |
| Cow position: | chr20:8215622-8216535 (view UCSC Genome Browser custom track) |
| Alignm length: | 930 |
| Alignm identity: | 654 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 27-237 |
| Cow position: | chr20:22207076-22207285 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 159, 24 |
| Conread position: | 39-903 |
| Cow position: | chr20:18315149-18314328 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 630 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 89-327 |
| Cow position: | chr20:3893301-3893544 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 193 |
| Conread position: | 121-596 |
| Cow position: | chr20:8834986-8834493 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 138 |
| Conread position: | 122-330 |
| Cow position: | chr20:11591685-11591903 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 155 |
| Conread position: | 122-608 |
| Cow position: | chr20:2790680-2790196 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 133-583 |
| Cow position: | chr20:24371567-24371111 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 121 |
| Conread position: | 138-557 |
| Cow position: | chr20:20754238-20753829 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 150-504 |
| Cow position: | chr20:37580343-37580684 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 151-882 |
| Cow position: | chr20:10840456-10839720 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 167-903 |
| Cow position: | chr20:29948778-29949525 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 6 |
| Conread position: | 168-872 |
| Cow position: | chr20:30684600-30685307 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 190-894 |
| Cow position: | chr20:35124788-35125505 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 200-857 |
| Cow position: | chr20:13679741-13679075 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 207-903 |
| Cow position: | chr20:15097566-15096859 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 34 |
| Conread position: | 211-340 |
| Cow position: | chr20:3033373-3033505 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 214-903 |
| Cow position: | chr20:21914645-21915340 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 27 |
| Conread position: | 215-903 |
| Cow position: | chr20:28565277-28564568 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 220-593 |
| Cow position: | chr20:8003902-8003528 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 21 |
| Conread position: | 220-672 |
| Cow position: | chr20:12438437-12437984 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 220-901 |
| Cow position: | chr20:13763228-13763923 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-901 |
| Cow position: | chr20:15292334-15293021 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr20:5535261-5535956 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr20:23469342-23468641 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr20:27869521-27870225 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 222-360 |
| Cow position: | chr20:10845797-10845659 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 132, 121 |
| Conread position: | 222-416 |
| Cow position: | chr20:42076736-42076545 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 136, 118 |
| Conread position: | 222-610 |
| Cow position: | chr20:25850666-25850279 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 28 |
| Conread position: | 222-627 |
| Cow position: | chr20:28161096-28161506 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 222-894 |
| Cow position: | chr20:23799211-23799895 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 19 |
| Conread position: | 223-339 |
| Cow position: | chr20:15947055-15946938 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 223-667 |
| Cow position: | chr20:21393919-21394365 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 121 |
| Conread position: | 223-903 |
| Cow position: | chr20:823086-823780 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-903 |
| Cow position: | chr20:19438258-19438937 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 235-633 |
| Cow position: | chr20:16179478-16179077 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 108 |
| Conread position: | 235-776 |
| Cow position: | chr20:25961433-25961983 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 235-901 |
| Cow position: | chr20:38351008-38351692 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 246-897 |
| Cow position: | chr20:42905561-42906212 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 269-493 |
| Cow position: | chr20:7115114-7114890 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 88, 5 |
| Conread position: | 295-503 |
| Cow position: | chr20:38624405-38624612 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 46 |
Show alignments to all cow chromosomes.