Cow genome map
| Conread name: | Tra1-TCH01G050069 |
| Conread position: | 28-468 |
| Cow position: | chr22:41239141-41239603 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 28-511 |
| Cow position: | chr22:11782080-11781589 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 78, 66 |
| Conread position: | 29-771 |
| Cow position: | chr22:23853741-23854468 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 73 |
| Conread position: | 30-298 |
| Cow position: | chr22:41419291-41419031 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 143, 64 |
| Conread position: | 30-325 |
| Cow position: | chr22:1283245-1282947 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 64 |
| Conread position: | 30-355 |
| Cow position: | chr22:44609990-44610298 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 46 |
| Conread position: | 30-490 |
| Cow position: | chr22:1322209-1322661 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 73 |
| Conread position: | 30-533 |
| Cow position: | chr22:13917916-13918420 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 72 |
| Conread position: | 30-783 |
| Cow position: | chr22:35907315-35906568 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 64 |
| Conread position: | 30-799 |
| Cow position: | chr22:3306320-3305553 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 64 |
| Conread position: | 30-903 |
| Cow position: | chr22:6503067-6502182 (view UCSC Genome Browser custom track) |
| Alignm length: | 905 |
| Alignm identity: | 656 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 64 |
| Conread position: | 31-335 |
| Cow position: | chr22:44475955-44476254 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 142, 54 |
| Conread position: | 70-550 |
| Cow position: | chr22:1269670-1269194 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 70-903 |
| Cow position: | chr22:11031873-11032710 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 651 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 17 |
| Conread position: | 104-534 |
| Cow position: | chr22:37132581-37133007 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 108-355 |
| Cow position: | chr22:2395886-2395632 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 33, 142 |
| Conread position: | 109-471 |
| Cow position: | chr22:8875768-8876132 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 241, 46 |
| Conread position: | 114-358 |
| Cow position: | chr22:39882002-39881775 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 117-602 |
| Cow position: | chr22:36552281-36551807 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 125-893 |
| Cow position: | chr22:36269402-36270172 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 157-559 |
| Cow position: | chr22:14208210-14207804 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 183-866 |
| Cow position: | chr22:34599627-34600306 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 167 |
| Conread position: | 205-903 |
| Cow position: | chr22:36184008-36184722 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 207-657 |
| Cow position: | chr22:17328482-17328028 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 26 |
| Conread position: | 212-894 |
| Cow position: | chr22:693877-694573 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 131 |
| Conread position: | 215-889 |
| Cow position: | chr22:326908-326222 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 220-668 |
| Cow position: | chr22:5308369-5308814 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 121 |
| Conread position: | 220-901 |
| Cow position: | chr22:560435-559750 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-901 |
| Cow position: | chr22:19143429-19142729 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 220-901 |
| Cow position: | chr22:31313609-31314307 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 21 |
| Conread position: | 220-901 |
| Cow position: | chr22:42991442-42992136 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 20 |
| Conread position: | 220-903 |
| Cow position: | chr22:31334768-31334072 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 220-903 |
| Cow position: | chr22:36861260-36860572 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 220-903 |
| Cow position: | chr22:39469253-39468557 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 31 |
| Conread position: | 220-903 |
| Cow position: | chr22:44396712-44397409 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 220-903 |
| Cow position: | chr22:44934249-44934933 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 23 |
| Conread position: | 221-514 |
| Cow position: | chr22:16814149-16814447 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 221-901 |
| Cow position: | chr22:15313680-15312991 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 20 |
| Conread position: | 221-901 |
| Cow position: | chr22:34168602-34169299 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 20 |
| Conread position: | 221-903 |
| Cow position: | chr22:18816115-18815417 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 20 |
| Conread position: | 221-903 |
| Cow position: | chr22:44369362-44368654 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 96 |
| Conread position: | 222-444 |
| Cow position: | chr22:15851585-15851808 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 155, 202 |
| Conread position: | 222-659 |
| Cow position: | chr22:48004804-48005245 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 121 |
| Conread position: | 222-894 |
| Cow position: | chr22:37072808-37072131 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 104 |
| Conread position: | 223-396 |
| Cow position: | chr22:44490150-44490324 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-403 |
| Cow position: | chr22:13773166-13773345 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 140, 21 |
| Conread position: | 223-537 |
| Cow position: | chr22:525421-525104 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 223-889 |
| Cow position: | chr22:537366-538048 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 74 |
| Conread position: | 223-889 |
| Cow position: | chr22:1879058-1879741 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 102 |
| Conread position: | 223-903 |
| Cow position: | chr22:18027544-18028245 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 120 |
| Conread position: | 223-903 |
| Cow position: | chr22:27309508-27308812 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 63 |
| Conread position: | 223-903 |
| Cow position: | chr22:35672091-35671391 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 123 |
| Conread position: | 224-376 |
| Cow position: | chr22:1522283-1522435 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 134, 119 |
| Conread position: | 226-903 |
| Cow position: | chr22:1520740-1520060 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 117 |
| Conread position: | 233-903 |
| Cow position: | chr22:5233007-5232328 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 113 |
| Conread position: | 234-491 |
| Cow position: | chr22:46581312-46581054 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 121, 110 |
| Conread position: | 235-889 |
| Cow position: | chr22:3278080-3277412 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 235-903 |
| Cow position: | chr22:10909557-10908873 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 235-903 |
| Cow position: | chr22:27284307-27284990 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 110 |
| Conread position: | 241-903 |
| Cow position: | chr22:20240559-20239878 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 78 |
| Conread position: | 244-889 |
| Cow position: | chr22:6020949-6021610 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 109 |
| Conread position: | 244-903 |
| Cow position: | chr22:12731383-12730720 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 100 |
| Conread position: | 246-610 |
| Cow position: | chr22:44352683-44352328 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 12 |
| Conread position: | 258-894 |
| Cow position: | chr22:14881102-14880470 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 410 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 86 |
Show alignments to all cow chromosomes.