Cow genome map
| Conread name: | Tra1-TCH01G050069 |
| Conread position: | 28-605 |
| Cow position: | chr23:26836740-26837307 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 370 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 23, 88 |
| Conread position: | 29-903 |
| Cow position: | chr23:16615351-16614473 (view UCSC Genome Browser custom track) |
| Alignm length: | 898 |
| Alignm identity: | 647 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 53 |
| Conread position: | 58-290 |
| Cow position: | chr23:31650110-31649878 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 74-444 |
| Cow position: | chr23:9545699-9546068 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 98-366 |
| Cow position: | chr23:22875161-22874913 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 116-901 |
| Cow position: | chr23:1402333-1401575 (view UCSC Genome Browser custom track) |
| Alignm length: | 805 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 128 |
| Conread position: | 117-334 |
| Cow position: | chr23:19331850-19331628 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 117-607 |
| Cow position: | chr23:15877599-15877114 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 26 |
| Conread position: | 123-901 |
| Cow position: | chr23:2341258-2342037 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 120 |
| Conread position: | 147-833 |
| Cow position: | chr23:13509843-13510548 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 8 |
| Conread position: | 168-536 |
| Cow position: | chr23:29452092-29451734 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 5 |
| Conread position: | 168-642 |
| Cow position: | chr23:3014617-3015088 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 173-686 |
| Cow position: | chr23:5874415-5873912 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 183-629 |
| Cow position: | chr23:7046427-7045971 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 38 |
| Conread position: | 187-493 |
| Cow position: | chr23:25683807-25683498 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 193-901 |
| Cow position: | chr23:20155974-20155258 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 199-473 |
| Cow position: | chr23:15525860-15526133 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 219-903 |
| Cow position: | chr23:2716658-2717354 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 220-362 |
| Cow position: | chr23:30636031-30635891 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 220-541 |
| Cow position: | chr23:11778758-11779078 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 220-592 |
| Cow position: | chr23:14965482-14965106 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 21 |
| Conread position: | 220-633 |
| Cow position: | chr23:2757864-2758281 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 220-903 |
| Cow position: | chr23:4640354-4639661 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 21 |
| Conread position: | 220-903 |
| Cow position: | chr23:27399773-27400471 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 221-553 |
| Cow position: | chr23:4434722-4435057 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 221-735 |
| Cow position: | chr23:31447078-31447606 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 122 |
| Conread position: | 222-341 |
| Cow position: | chr23:5778816-5778697 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 222-444 |
| Cow position: | chr23:2026848-2026621 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 136, 124 |
| Conread position: | 222-628 |
| Cow position: | chr23:16616574-16616165 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 7 |
| Conread position: | 222-669 |
| Cow position: | chr23:967078-966622 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 19 |
| Conread position: | 222-901 |
| Cow position: | chr23:4510348-4511018 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 122 |
| Conread position: | 222-901 |
| Cow position: | chr23:15177342-15178033 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 70 |
| Conread position: | 222-901 |
| Cow position: | chr23:36031105-36030417 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 222-903 |
| Cow position: | chr23:4888944-4889648 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 222-903 |
| Cow position: | chr23:15219625-15218939 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 222-903 |
| Cow position: | chr23:19489814-19490499 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 222-903 |
| Cow position: | chr23:28913665-28914358 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 223-444 |
| Cow position: | chr23:2574807-2575027 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 131, 21 |
| Conread position: | 223-493 |
| Cow position: | chr23:31594976-31594709 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 223-665 |
| Cow position: | chr23:2781942-2781504 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 198 |
| Conread position: | 223-889 |
| Cow position: | chr23:14974292-14973617 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 199 |
| Conread position: | 223-903 |
| Cow position: | chr23:2312975-2312278 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 122 |
| Conread position: | 224-489 |
| Cow position: | chr23:22146981-22146715 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 122 |
| Conread position: | 225-611 |
| Cow position: | chr23:20302478-20302859 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 118 |
| Conread position: | 234-556 |
| Cow position: | chr23:17786046-17785719 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 112 |
| Conread position: | 235-898 |
| Cow position: | chr23:4360106-4360764 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 108 |
| Conread position: | 235-903 |
| Cow position: | chr23:28217566-28218248 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 241-795 |
| Cow position: | chr23:23830249-23830815 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 90 |
| Conread position: | 241-903 |
| Cow position: | chr23:19950303-19949636 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 35 |
| Conread position: | 272-901 |
| Cow position: | chr23:4817336-4817981 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 71 |
| Conread position: | 275-651 |
| Cow position: | chr23:1024700-1024314 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 280-901 |
| Cow position: | chr23:2794907-2794296 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 36 |
Show alignments to all cow chromosomes.