Cow genome map


           Conread name:
           Tra1-TCH01G050069
        

               Conread position:
               28-605
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               370
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               29-903
               

               Cow position:
               
               

               Alignm length:
               898
               

               Alignm identity:
               647
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 53
               

               Conread position:
               58-290
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               74-444
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               98-366
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               116-901
               

               Cow position:
               
               

               Alignm length:
               805
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 128
               

               Conread position:
               117-334
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 13
               

               Conread position:
               117-607
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               123-901
               

               Cow position:
               
               

               Alignm length:
               797
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 120
               

               Conread position:
               147-833
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               168-536
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 5
               

               Conread position:
               168-642
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               173-686
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               183-629
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 38
               

               Conread position:
               187-493
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               193-901
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               199-473
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               59, 17
               

               Conread position:
               219-903
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 60
               

               Conread position:
               220-362
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               220-541
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               220-592
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 21
               

               Conread position:
               220-633
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 21
               

               Conread position:
               220-903
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               221-553
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               221-735
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 122
               

               Conread position:
               222-341
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 102
               

               Conread position:
               222-444
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               136, 124
               

               Conread position:
               222-628
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 7
               

               Conread position:
               222-669
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 122
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 70
               

               Conread position:
               222-901
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 19
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 18
               

               Conread position:
               222-903
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               223-444
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               223-493
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               223-665
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 198
               

               Conread position:
               223-889
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 199
               

               Conread position:
               223-903
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               224-489
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 122
               

               Conread position:
               225-611
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 118
               

               Conread position:
               234-556
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 112
               

               Conread position:
               235-898
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 108
               

               Conread position:
               235-903
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               241-795
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 90
               

               Conread position:
               241-903
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 35
               

               Conread position:
               272-901
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 71
               

               Conread position:
               275-651
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               280-901
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 36
               
Show alignments to all cow chromosomes.